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Create app.py
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app.py
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import streamlit as st
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# Function to find matches between reference and query sequences
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def find_matches(reference, query):
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matches = ""
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for ref_char, query_char in zip(reference, query):
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if ref_char == query_char:
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matches += ref_char.upper()
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else:
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matches += "-"
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match_percentage = (matches.count("-") / len(reference)) if len(reference) else 0
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return matches, round((1 - match_percentage) * 100, 2)
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# Streamlit app
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st.title("DNA Sequence Matching 🧬")
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st.subheader("Analyze the similarity between two DNA sequences")
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# Input fields for sequences
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reference = st.text_area(
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"Enter Reference DNA Sequence:",
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placeholder="e.g., ACTGACTGACTG"
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).strip().upper()
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query = st.text_area(
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"Enter Query DNA Sequence:",
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placeholder="e.g., ACTGTTTGACTG"
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).strip().upper()
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# Validate input
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if st.button("Match DNA Sequences"):
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if not reference or not query:
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st.error("Please provide both Reference and Query DNA sequences.")
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elif len(reference) != len(query):
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st.error("The Reference and Query sequences must have the same length.")
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else:
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# Find matches and calculate percentage
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matches, percentage = find_matches(reference, query)
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# Display results
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st.write("**Reference Sequence:**")
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st.code(reference)
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st.write("**Query Sequence:**")
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st.code(query)
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st.write("**Matching Sequence:**")
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st.code(matches)
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st.success(f"Match Percentage: {percentage}%")
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st.write("Note: Sequences must be of the same length for accurate matching.")
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