File size: 6,447 Bytes
33d0f9f
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
"""
Train all models and save them for the Streamlit app.
Run this once: python3 train_models.py
"""

import pandas as pd
import numpy as np
import joblib
import os
from sklearn.model_selection import train_test_split, StratifiedKFold, cross_val_score
from sklearn.preprocessing import RobustScaler
from sklearn.linear_model import LogisticRegression
from sklearn.ensemble import RandomForestClassifier, GradientBoostingClassifier, VotingClassifier
from sklearn.tree import DecisionTreeClassifier
from sklearn.svm import SVC
from sklearn.neighbors import KNeighborsClassifier
from sklearn.metrics import (
    accuracy_score, recall_score, f1_score,
    roc_auc_score, roc_curve, confusion_matrix, precision_score
)
from xgboost import XGBClassifier
import warnings
warnings.filterwarnings("ignore")

MODELS_DIR = "models"
os.makedirs(MODELS_DIR, exist_ok=True)

print("πŸ“‚ Loading dataset...")
df = pd.read_csv("diabetes.csv")

# ── Imputation ─────────────────────────────────────────────────────────────
zero_cols = ["Glucose", "BloodPressure", "SkinThickness", "Insulin", "BMI"]
df_clean = df.copy()
medians = {}
for col in zero_cols:
    med = df_clean[col].replace(0, np.nan).median()
    medians[col] = med
    df_clean[col] = df_clean[col].replace(0, med)

# ── Feature Engineering ────────────────────────────────────────────────────
def engineer_features(df_in):
    d = df_in.copy()
    d["Glucose_BMI"]           = d["Glucose"] * d["BMI"]
    d["Age_Pregnancies"]       = d["Age"] * d["Pregnancies"]
    d["BMI_Age"]               = d["BMI"] * d["Age"]
    d["Glucose_Insulin_ratio"] = d["Glucose"] / (d["Insulin"] + 1)
    d["Risk_Score"] = (
        (d["Glucose"] > 140).astype(int) +
        (d["BMI"] > 30).astype(int) +
        (d["Age"] > 40).astype(int)
    )
    return d

df_fe = engineer_features(df_clean)
feature_cols = [c for c in df_fe.columns if c != "Outcome"]
X = df_fe[feature_cols]
y = df_fe["Outcome"]

X_train, X_test, y_train, y_test = train_test_split(
    X, y, test_size=0.2, random_state=42, stratify=y
)

scaler = RobustScaler()
X_train_s = scaler.fit_transform(X_train)
X_test_s  = scaler.transform(X_test)

# ── Model definitions ──────────────────────────────────────────────────────
models = {
    "Logistic Regression":  LogisticRegression(C=1.0, class_weight="balanced", max_iter=1000, random_state=42),
    "Random Forest":        RandomForestClassifier(n_estimators=300, class_weight="balanced", random_state=42, n_jobs=-1),
    "Gradient Boosting":    GradientBoostingClassifier(n_estimators=200, learning_rate=0.05, max_depth=4, random_state=42),
    "Decision Tree":        DecisionTreeClassifier(class_weight="balanced", max_depth=6, random_state=42),
    "SVM":                  SVC(probability=True, class_weight="balanced", kernel="rbf", C=10, gamma="scale", random_state=42),
    "KNN":                  KNeighborsClassifier(n_neighbors=7, weights="distance"),
    "XGBoost":              XGBClassifier(n_estimators=200, learning_rate=0.05, max_depth=4,
                                          scale_pos_weight=2, random_state=42,
                                          eval_metric="logloss", verbosity=0),
}

cv = StratifiedKFold(n_splits=5, shuffle=True, random_state=42)
results = {}

print(f"\n{'Model':<25} {'Acc':>6} {'Prec':>6} {'Rec':>6} {'F1':>6} {'AUC':>7} {'CV-Acc':>8}")
print("─" * 70)

for name, model in models.items():
    model.fit(X_train_s, y_train)
    pred  = model.predict(X_test_s)
    prob  = model.predict_proba(X_test_s)[:, 1]
    acc   = accuracy_score(y_test, pred)
    prec  = precision_score(y_test, pred)
    rec   = recall_score(y_test, pred)
    f1    = f1_score(y_test, pred)
    auc   = roc_auc_score(y_test, prob)
    cv_sc = cross_val_score(model, X_train_s, y_train, cv=cv, scoring="accuracy").mean()
    fpr, tpr, thresholds = roc_curve(y_test, prob)
    cm    = confusion_matrix(y_test, pred).tolist()

    results[name] = dict(
        accuracy=acc, precision=prec, recall=rec, f1=f1, auc=auc,
        cv_accuracy=cv_sc, fpr=fpr.tolist(), tpr=tpr.tolist(),
        confusion_matrix=cm, thresholds=thresholds.tolist()
    )
    print(f"{name:<25} {acc:>6.4f} {prec:>6.4f} {rec:>6.4f} {f1:>6.4f} {auc:>7.4f} {cv_sc:>8.4f}")

# ── Ensemble ───────────────────────────────────────────────────────────────
print("\nTraining ensemble...")
ensemble = VotingClassifier(
    estimators=[(n, m) for n, m in models.items()], voting="soft"
)
ensemble.fit(X_train_s, y_train)
ens_pred = ensemble.predict(X_test_s)
ens_prob = ensemble.predict_proba(X_test_s)[:, 1]
fpr_e, tpr_e, thr_e = roc_curve(y_test, ens_prob)
results["Ensemble"] = dict(
    accuracy=accuracy_score(y_test, ens_pred),
    precision=precision_score(y_test, ens_pred),
    recall=recall_score(y_test, ens_pred),
    f1=f1_score(y_test, ens_pred),
    auc=roc_auc_score(y_test, ens_prob),
    cv_accuracy=accuracy_score(y_test, ens_pred),
    fpr=fpr_e.tolist(), tpr=tpr_e.tolist(),
    confusion_matrix=confusion_matrix(y_test, ens_pred).tolist(),
    thresholds=thr_e.tolist()
)

# ── Save everything ────────────────────────────────────────────────────────
joblib.dump(scaler,    f"{MODELS_DIR}/scaler.pkl")
joblib.dump(models,    f"{MODELS_DIR}/models.pkl")
joblib.dump(ensemble,  f"{MODELS_DIR}/ensemble.pkl")
joblib.dump(results,   f"{MODELS_DIR}/results.pkl")
joblib.dump(medians,   f"{MODELS_DIR}/medians.pkl")
joblib.dump(feature_cols, f"{MODELS_DIR}/feature_cols.pkl")

# Save test data for later analysis
import json
test_data = {"X_test": X_test.values.tolist(), "y_test": y_test.tolist(),
             "columns": feature_cols}
with open(f"{MODELS_DIR}/test_data.json", "w") as f:
    json.dump(test_data, f)

best = max(results, key=lambda k: results[k]["auc"])
print(f"\nπŸ† Best model by AUC: {best} β€” AUC={results[best]['auc']:.4f}")
print("βœ… All models saved to ./models/")