Add debug logging to track DNA optimization flow

Force Python to reload site-packages after CAI installation

Force legacy setup.py installation to bypass wheel naming issues

Fix CAI installation - remove deprecated --no-use-pep517 flag

Fix CAI installation for Hugging Face Spaces

Add CAI verification steps to Dockerfile

Fix CAI installation with Dockerfile approach

Pin CAI to specific commit to avoid dynamic wheel naming issues

fix

Fix CAI package installation to use master branch instead of main

Pin CAI dependency and remove style nit comment

Enhance display of optimized DNA sequence in app.py with dynamic text area height calculation for improved readability

Refactor model and data downloading in app.py to include Hugging Face token support

Enhance model loading and error handling in app.py

Remove 'State-of-the-art E. coli codon optimization for publication-quality research' text

Add local CodonTransformer modules for custom ColiFormer functionality

Add .gitignore for clean repository

Fix short_description length for HF Spaces metadata

Add ColiFormer Streamlit app for Hugging Face Spaces

initial commit