rocketshp / pyproject.toml
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[project]
name = "rocketshp-space"
version = "0.1.0"
description = "Add your description here"
readme = "README.md"
requires-python = ">=3.11"
dependencies = [
"biopython>=1.79",
"biotite==0.41.2",
"datasets>=4.3.0",
"esm==3.1.3",
"gradio[oauth]>=5.49.1",
"gradio-molecule3d>=0.0.7",
"h5py>=3.15.1",
"huggingface-hub>=0.36.0",
"lightning>=2.4.0",
"loguru>=0.7.3",
"matplotlib>=3.10.7",
"mdanalysis>=2.9.0",
"mdanalysisdata>=0.9.0",
"neptune>=1.13.0",
"nglview>=4.0",
"numpy>=1.23.5",
"numpy-indexed>=0.3.7",
"omegaconf>=2.3.0",
"openpyxl>=3.1.5",
"pandas>=2.3.3",
"python-dateutil>=2.9.0.post0",
"python-dotenv>=1.1.1",
"rocketshp",
"scikit-learn>=1.7.2",
"scipy>=1.16.2",
"seaborn>=0.13.2",
"statsmodels>=0.14.5",
"tokenizers>=0.20.3",
"torchmetrics>=1.8.2",
"tqdm>=4.67.1",
"transformers>=4.46.3",
"typer>=0.20.0",
]
[tool.uv.sources]
rocketshp = { git = "https://github.com/FlatironInstitute/RocketSHP" }