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import os
import io
import tempfile
from typing import List, Tuple, Optional
import gradio as gr
from dotenv import load_dotenv
# --- Web scraping ---
import requests
from bs4 import BeautifulSoup
# --- LangChain core ---
from langchain.schema import Document
from langchain.text_splitter import RecursiveCharacterTextSplitter
from langchain.prompts import PromptTemplate
# --- Loaders (files) ---
from langchain_community.document_loaders import (
PyPDFLoader,
UnstructuredWordDocumentLoader,
TextLoader,
CSVLoader,
UnstructuredExcelLoader,
)
# --- Neo4j + Vector store + Graph ---
from langchain_community.graphs import Neo4jGraph
from langchain_community.vectorstores import Neo4jVector
from langchain_experimental.graph_transformers import LLMGraphTransformer
from langchain.chains.graph_qa.cypher import GraphCypherQAChain
# --- LLMs & Embeddings: Cohere or Gemini ---
# Cohere
from langchain_community.embeddings import CohereEmbeddings
from langchain_community.llms import Cohere
# Gemini (Google Generative AI API key)
from langchain_google_genai import ChatGoogleGenerativeAI, GoogleGenerativeAIEmbeddings
# Global state management
class AppState:
def __init__(self):
self.graph: Optional[Neo4jGraph] = None
self.vs: Optional[Neo4jVector] = None
self.llm = None
self.embeddings = None
self.chat_history = []
app_state = AppState()
# ===============================
# Helpers
# ===============================
def clean_chunks(docs: List[Document], chunk_size=800, chunk_overlap=120) -> List[Document]:
"""Split to moderately large chunks for better retrieval and context quality."""
splitter = RecursiveCharacterTextSplitter(chunk_size=chunk_size, chunk_overlap=chunk_overlap)
return splitter.split_documents(docs)
def load_and_split_file(file_path: str) -> List[Document]:
"""Load a single file (by extension) and return split docs."""
filename = os.path.basename(file_path)
name = filename.lower()
_, ext = os.path.splitext(name)
ext = ext.lstrip(".")
try:
if ext == "pdf":
loader = PyPDFLoader(file_path)
elif ext in ("docx", "doc"):
loader = UnstructuredWordDocumentLoader(file_path)
elif ext == "txt":
loader = TextLoader(file_path, autodetect_encoding=True)
elif ext == "csv":
loader = CSVLoader(file_path, csv_args={"delimiter": ","})
elif ext in ("xlsx", "xls"):
loader = UnstructuredExcelLoader(file_path, mode="elements")
else:
print(f"Unsupported file type: {ext}")
return []
docs = loader.load()
# Attach source metadata
for d in docs:
d.metadata = d.metadata or {}
d.metadata["source"] = filename
return clean_chunks(docs)
except Exception as e:
print(f"Error processing {filename}: {e}")
return []
def scrape_webpage(url: str) -> List[Document]:
"""Scrape a single URL (no crawling), extract visible text, split into chunks."""
try:
headers = {
"User-Agent": "Mozilla/5.0 (Windows NT 10.0; Win64; x64) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/91.0.4472.124 Safari/537.36"
}
r = requests.get(url, headers=headers, timeout=20, allow_redirects=True)
r.raise_for_status()
soup = BeautifulSoup(r.text, "html.parser")
# Remove script and style elements
for script in soup(["script", "style", "nav", "header", "footer"]):
script.decompose()
# Restrict to likely content areas to reduce nav noise
main_candidates = soup.select("main, article, section, .content, .post, .entry") or [soup.body or soup]
texts = []
for node in main_candidates:
if node:
text = node.get_text(separator=" ", strip=True)
if text and len(text) > 50: # Only keep substantial text
texts.append(text)
joined = " ".join(texts).strip()
if not joined or len(joined) < 100:
return []
base_doc = Document(page_content=joined, metadata={"source": url, "type": "web"})
return clean_chunks([base_doc], chunk_size=800, chunk_overlap=120)
except Exception as e:
print(f"Error scraping {url}: {e}")
return []
def init_models(provider: str, api_key: str):
"""Initialize LLM and embeddings for the chosen provider."""
if provider == "Cohere":
if not api_key:
raise ValueError("Please provide a Cohere API key.")
# Initialize Cohere LLM
llm = Cohere(model="command", temperature=0.2, cohere_api_key=api_key)
# Initialize Cohere Embeddings with user_agent parameter
embeddings = CohereEmbeddings(
model="embed-english-v3.0",
cohere_api_key=api_key,
user_agent="langchain-knowledge-graph-chatbot"
)
return llm, embeddings
elif provider == "Gemini":
if not api_key:
raise ValueError("Please provide a Gemini API key.")
# Chat + Embeddings via Google Generative AI (no GCP project required)
llm = ChatGoogleGenerativeAI(
model="gemini-1.5-pro",
temperature=0.2,
google_api_key=api_key
)
embeddings = GoogleGenerativeAIEmbeddings(
model="models/embedding-001",
google_api_key=api_key
)
return llm, embeddings
else:
raise ValueError(f"Unsupported provider: {provider}")
def upsert_chunks_vector_index(
docs: List[Document],
embeddings,
neo4j_url: str,
neo4j_user: str,
neo4j_password: str,
database: str = "neo4j",
node_label: str = "Chunk",
text_prop: str = "text",
embed_prop: str = "embedding",
index_name: str = "chunk_vector_index",
keyword_index_name: str = "chunk_keyword_index",
):
"""Create/update a Neo4j vector index with chunk nodes for retrieval."""
# Ensure text property exists per Document
prepared_docs = []
for d in docs:
content = d.page_content.strip()
if not content:
continue
d.metadata = d.metadata or {}
# Neo4jVector expects text under a known property; it will write it.
prepared_docs.append(Document(page_content=content, metadata=d.metadata))
if not prepared_docs:
return None
vs = Neo4jVector.from_documents(
documents=prepared_docs,
embedding=embeddings,
url=neo4j_url,
username=neo4j_user,
password=neo4j_password,
database=database,
node_label=node_label,
text_node_property=text_prop,
embedding_node_property=embed_prop,
index_name=index_name,
keyword_index_name=keyword_index_name,
# Removed search_type parameter - let it use default
)
return vs
def build_kg_with_llm(
docs: List[Document],
graph: Neo4jGraph,
llm,
allowed_nodes: List[str],
allowed_rels: List[str],
):
"""Extract a lean, controllable KG from your documents and persist in Neo4j."""
try:
# Try to import json_repair, install if missing
try:
import json_repair
except ImportError:
print("Installing json-repair package...")
import subprocess
import sys
subprocess.check_call([sys.executable, "-m", "pip", "install", "json-repair"])
import json_repair
transformer = LLMGraphTransformer(
llm=llm,
allowed_nodes=allowed_nodes,
allowed_relationships=allowed_rels,
node_properties=False,
relationship_properties=False,
)
# Process documents in smaller batches to avoid token limits
batch_size = 3
total_batches = (len(docs) + batch_size - 1) // batch_size
for i in range(0, len(docs), batch_size):
batch = docs[i:i + batch_size]
batch_num = (i // batch_size) + 1
print(f"Processing batch {batch_num}/{total_batches} ({len(batch)} documents)")
try:
graph_docs = transformer.convert_to_graph_documents(batch)
if graph_docs:
graph.add_graph_documents(graph_docs, include_source=True)
print(f"Successfully processed batch {batch_num}")
else:
print(f"No graph documents generated for batch {batch_num}")
except Exception as e:
print(f"Error processing batch {batch_num}: {e}")
continue
except Exception as e:
print(f"Knowledge graph extraction error: {e}")
raise e
def query_knowledge_graph(graph: Neo4jGraph, question: str, llm) -> str:
"""Query the knowledge graph using natural language and return results."""
try:
# Create a GraphCypherQAChain to query the knowledge graph
cypher_chain = GraphCypherQAChain.from_llm(
llm=llm,
graph=graph,
verbose=True,
return_intermediate_steps=True,
allow_dangerous_requests=True # Allow complex queries
)
# Query the knowledge graph
result = cypher_chain(question)
# Extract the answer and query information
answer = result.get("result", "")
intermediate_steps = result.get("intermediate_steps", [])
# Format the response with graph context
formatted_answer = f"**Knowledge Graph Answer:**\n{answer}"
# Add query information if available
if intermediate_steps:
for step in intermediate_steps:
if "query" in step:
formatted_answer += f"\n\n*Graph Query Used:* `{step['query']}`"
return formatted_answer
except Exception as e:
return f"Error querying knowledge graph: {e}"
def hybrid_retrieval_answer(
question: str,
graph: Neo4jGraph,
vs: Neo4jVector,
llm
) -> str:
"""Combine knowledge graph querying with vector search for comprehensive answers."""
# 1. Query the Knowledge Graph first
kg_answer = query_knowledge_graph(graph, question, llm)
# 2. Get vector search results
try:
retriever = vs.as_retriever(search_type="similarity", search_kwargs={"k": 6})
relevant_docs = retriever.get_relevant_documents(question)
context_texts = []
for d in relevant_docs:
src = d.metadata.get("source", "unknown")
snippet = d.page_content[:1200]
context_texts.append(f"[Source: {src}] {snippet}")
vector_context = "\n\n---\n\n".join(context_texts)
except Exception as e:
vector_context = f"Vector search error: {e}"
# 3. Combine both approaches for a comprehensive answer
combined_prompt = f"""
You are a helpful assistant that must provide comprehensive answers using BOTH knowledge graph data and document context.
KNOWLEDGE GRAPH RESULTS:
{kg_answer}
DOCUMENT CONTEXT:
{vector_context}
USER QUESTION: {question}
Instructions:
- Synthesize information from BOTH the knowledge graph and document context
- If the knowledge graph provides structured relationships, highlight those
- If the documents provide additional details, include those
- Always cite sources when possible
- If information conflicts, note the discrepancy
- If neither source has sufficient information, say so clearly
Provide a comprehensive answer that leverages both structured knowledge and document content:
"""
try:
response = llm.invoke(combined_prompt)
if hasattr(response, "content"):
return response.content
return str(response)
except Exception as e:
return f"Error generating combined answer: {e}"
# ===============================
# Gradio Interface Functions
# ===============================
def connect_neo4j(neo4j_url: str, neo4j_user: str, neo4j_password: str) -> str:
"""Connect to Neo4j database and check for existing data."""
try:
app_state.graph = Neo4jGraph(url=neo4j_url, username=neo4j_user, password=neo4j_password)
# Check if there's existing data in the database
try:
# Check for existing chunks/nodes
chunk_count = app_state.graph.query("MATCH (n:Chunk) RETURN count(n) as count")[0]["count"]
entity_count = app_state.graph.query("MATCH (n) WHERE NOT n:Chunk RETURN count(n) as count")[0]["count"]
status_msg = f"β
Successfully connected to Neo4j!\n"
status_msg += f"π Found {chunk_count} document chunks and {entity_count} knowledge graph entities"
# Try to reconnect to existing vector store if chunks exist
if chunk_count > 0:
try:
# We need embeddings to reconnect to vector store
# For now, just indicate data exists but needs model setup
status_msg += f"\nπ‘ Existing data detected! Please set up your LLM provider and click 'Reconnect to Existing Data' to restore full functionality."
except Exception as e:
status_msg += f"\nβ οΈ Data found but vector store needs reconnection."
return status_msg
except Exception as e:
return "β
Successfully connected to Neo4j! (Empty database)"
except Exception as e:
return f"β Neo4j connection failed: {e}"
def reconnect_existing_data(
provider: str,
api_key: str,
neo4j_url: str,
neo4j_user: str,
neo4j_password: str
) -> str:
"""Reconnect to existing vector store and LLM models."""
if app_state.graph is None:
return "β Please connect to Neo4j first."
try:
# Initialize models
llm, embeddings = init_models(provider, api_key)
app_state.llm = llm
app_state.embeddings = embeddings
# Check if chunks exist
chunk_count = app_state.graph.query("MATCH (n:Chunk) RETURN count(n) as count")[0]["count"]
if chunk_count == 0:
return "β No existing data found. Please ingest new data first."
# Reconnect to existing vector store
try:
app_state.vs = Neo4jVector(
embedding=embeddings,
url=neo4j_url,
username=neo4j_user,
password=neo4j_password,
database="neo4j",
node_label="Chunk",
text_node_property="text",
embedding_node_property="embedding",
index_name="chunk_vector_index",
keyword_index_name="chunk_keyword_index",
)
# Test the vector store
test_results = app_state.vs.similarity_search("test", k=1)
return f"β
Successfully reconnected to existing data! Found {chunk_count} chunks. Vector store is ready for chat."
except Exception as vs_error:
# If vector store connection fails, try to rebuild it
return f"β οΈ Vector store connection failed: {vs_error}. You may need to re-ingest your data."
except Exception as e:
import traceback
error_details = traceback.format_exc()
print(f"Reconnection error: {error_details}")
return f"β Reconnection failed: {str(e)}"
def wipe_database() -> str:
"""Wipe the Neo4j database."""
if app_state.graph is None:
return "β Please connect to Neo4j first."
try:
app_state.graph.query("MATCH (n) DETACH DELETE n;")
return "β
Database successfully wiped!"
except Exception as e:
return f"β Failed to wipe database: {e}"
def process_knowledge(
provider: str,
api_key: str,
files: List[str],
urls: str,
neo4j_url: str,
neo4j_user: str,
neo4j_password: str
) -> str:
"""Process files and URLs to build knowledge graph."""
if app_state.graph is None:
return "β Please connect to Neo4j first."
try:
# Initialize models
llm, embeddings = init_models(provider, api_key)
app_state.llm = llm
app_state.embeddings = embeddings
all_docs: List[Document] = []
processed_files = 0
processed_urls = 0
# Process uploaded files
if files:
for file_path in files:
if file_path: # Check if file_path is not None/empty
try:
print(f"Processing file: {file_path}")
file_docs = load_and_split_file(file_path)
all_docs.extend(file_docs)
processed_files += 1
print(f"Successfully processed {file_path}: {len(file_docs)} chunks")
except Exception as e:
print(f"Failed to process file {file_path}: {e}")
continue
# Process URLs
if urls and urls.strip():
url_list = [u.strip() for u in urls.splitlines() if u.strip()]
for url in url_list:
try:
print(f"Processing URL: {url}")
url_docs = scrape_webpage(url)
all_docs.extend(url_docs)
processed_urls += 1
print(f"Successfully processed {url}: {len(url_docs)} chunks")
except Exception as e:
print(f"Failed to process URL {url}: {e}")
continue
if not all_docs:
return f"β οΈ No data extracted. Processed {processed_files} files and {processed_urls} URLs, but no usable content found."
print(f"Total documents to process: {len(all_docs)}")
# Build Knowledge Graph
allowed_nodes = ["Entity", "Concept", "Person", "Organization", "Location", "Event", "Fact"]
allowed_rels = ["RELATED_TO", "MENTIONS", "PART_OF", "CAUSES", "ASSOCIATED_WITH"]
try:
print("Building knowledge graph...")
build_kg_with_llm(all_docs, app_state.graph, llm, allowed_nodes, allowed_rels)
print("Knowledge graph built successfully")
except Exception as e:
print(f"KG extraction error: {e}")
return f"β KG extraction failed: {e}"
# Build Vector Index
try:
print("Building vector index...")
vs = upsert_chunks_vector_index(
docs=all_docs,
embeddings=embeddings,
neo4j_url=neo4j_url,
neo4j_user=neo4j_user,
neo4j_password=neo4j_password,
node_label="Chunk",
text_prop="text",
embed_prop="embedding",
index_name="chunk_vector_index",
keyword_index_name="chunk_keyword_index",
)
app_state.vs = vs
print("Vector index built successfully")
except Exception as e:
print(f"Vector indexing error: {e}")
return f"β Vector indexing failed: {e}"
return f"β
Successfully processed {processed_files} files and {processed_urls} URLs ({len(all_docs)} total chunks)! Knowledge graph and vector index are ready."
except Exception as e:
import traceback
error_details = traceback.format_exc()
print(f"Full error details: {error_details}")
return f"β Processing failed: {str(e)}"
def chat_with_knowledge(message: str, history: List[Tuple[str, str]]) -> Tuple[str, List[Tuple[str, str]]]:
"""Chat function using both knowledge graph and vector search."""
if app_state.graph is None or app_state.vs is None:
response = "β Please connect to Neo4j and ingest data first."
history.append((message, response))
return "", history
if app_state.llm is None:
response = "β Model not initialized. Please process some data first."
history.append((message, response))
return "", history
try:
# Use hybrid approach: Knowledge Graph + Vector Search
answer = hybrid_retrieval_answer(
question=message,
graph=app_state.graph,
vs=app_state.vs,
llm=app_state.llm
)
if not answer or answer.strip() == "":
answer = "I don't have enough information to answer that based on the ingested data."
history.append((message, answer))
return "", history
except Exception as e:
import traceback
error_details = traceback.format_exc()
print(f"Chat error details: {error_details}")
response = f"β Error during chat: {str(e)}"
history.append((message, response))
return "", history
def clear_chat_history():
"""Clear the chat history."""
app_state.chat_history = []
return []
# ===============================
# Gradio Interface
# ===============================
def create_interface():
"""Create the Gradio interface."""
load_dotenv()
with gr.Blocks(title="Knowledge Graph Chatbot", theme=gr.themes.Soft()) as demo:
gr.Markdown("# π Knowledge Graph Chatbot (Strict)")
gr.Markdown("Upload documents, scrape URLs, and chat with your knowledge using Neo4j and vector search!")
with gr.Tab("π§ Setup & Configuration"):
with gr.Row():
with gr.Column(scale=1):
gr.Markdown("### Model Settings")
provider = gr.Dropdown(
choices=["Cohere", "Gemini"],
value="Cohere",
label="LLM Provider"
)
api_key = gr.Textbox(
label="API Key",
type="password",
value=os.getenv("COHERE_API_KEY", ""),
placeholder="Enter your API key"
)
with gr.Column(scale=1):
gr.Markdown("### Neo4j Configuration")
neo4j_url = gr.Textbox(
label="Neo4j URL",
value=os.getenv("NEO4J_URI", "neo4j+s://your-neo4j-url"),
placeholder="neo4j+s://your-neo4j-url"
)
neo4j_user = gr.Textbox(
label="Username",
value=os.getenv("NEO4J_USER", "neo4j")
)
neo4j_password = gr.Textbox(
label="Password",
type="password",
value=os.getenv("NEO4J_PASSWORD", "")
)
with gr.Row():
connect_btn = gr.Button("π Connect to Neo4j", variant="primary")
wipe_btn = gr.Button("ποΈ Wipe Database", variant="stop")
reconnect_btn = gr.Button("π Reconnect to Existing Data", variant="secondary")
connection_status = gr.Textbox(
label="Connection Status",
interactive=False,
placeholder="Click 'Connect to Neo4j' to establish connection"
)
connect_btn.click(
fn=connect_neo4j,
inputs=[neo4j_url, neo4j_user, neo4j_password],
outputs=[connection_status]
)
wipe_btn.click(
fn=wipe_database,
outputs=[connection_status]
)
reconnect_btn.click(
fn=reconnect_existing_data,
inputs=[provider, api_key, neo4j_url, neo4j_user, neo4j_password],
outputs=[connection_status]
)
with gr.Tab("π Data Ingestion"):
gr.Markdown("### Upload Knowledge Sources")
files = gr.File(
label="Upload Files",
file_types=[".pdf", ".docx", ".doc", ".txt", ".csv", ".xls", ".xlsx"],
file_count="multiple"
)
urls = gr.Textbox(
label="URLs to Scrape",
placeholder="Enter URLs, one per line",
lines=5
)
process_btn = gr.Button("π Process & Build Knowledge Graph", variant="primary")
processing_status = gr.Textbox(
label="Processing Status",
interactive=False,
placeholder="Click 'Process & Build Knowledge Graph' to start"
)
process_btn.click(
fn=process_knowledge,
inputs=[provider, api_key, files, urls, neo4j_url, neo4j_user, neo4j_password],
outputs=[processing_status]
)
with gr.Tab("π¬ Chat"):
gr.Markdown("### Chat with Your Knowledge Graph")
gr.Markdown("Ask questions about your ingested data. The system uses **both knowledge graph queries and vector search** for comprehensive answers.")
chatbot = gr.Chatbot(
label="Knowledge Graph Chat",
height=500,
placeholder="Your conversation will appear here..."
)
with gr.Row():
msg_box = gr.Textbox(
label="Your Question",
placeholder="Ask about entities, relationships, or any content from your data...",
scale=4
)
send_btn = gr.Button("Send", variant="primary", scale=1)
clear_btn = gr.Button("ποΈ Clear Chat History", variant="secondary")
# Example questions
with gr.Accordion("π‘ Example Questions", open=False):
gr.Markdown("""
**Entity-based questions:**
- "What organizations are mentioned in the documents?"
- "Tell me about [person name] and their relationships"
- "What events are connected to [organization]?"
**Relationship queries:**
- "How are [entity1] and [entity2] related?"
- "What causes [concept] according to the documents?"
- "Show me all connections to [topic]"
**Content questions:**
- "Summarize the main concepts in the documents"
- "What are the key findings about [topic]?"
- "Explain [concept] based on the ingested data"
""")
# Chat functionality
msg_box.submit(
fn=chat_with_knowledge,
inputs=[msg_box, chatbot],
outputs=[msg_box, chatbot]
)
send_btn.click(
fn=chat_with_knowledge,
inputs=[msg_box, chatbot],
outputs=[msg_box, chatbot]
)
clear_btn.click(
fn=clear_chat_history,
outputs=[chatbot]
)
with gr.Tab("βΉοΈ Instructions"):
gr.Markdown("""
## How to Use This Knowledge Graph Chatbot
### 1. Setup & Configuration
- Choose your LLM provider (Cohere or Gemini)
- Enter your API key for the chosen provider
- Configure your Neo4j connection details
- Click "Connect to Neo4j" to establish the database connection
### 1.5. Reconnecting to Existing Data
**If you already have data in Neo4j from a previous session:**
- After connecting to Neo4j, if you see existing data detected
- Set up your LLM provider and API key
- Click "π Reconnect to Existing Data" instead of re-ingesting
- This will restore your vector store and enable chat without re-processing documents
### 2. Data Ingestion
- Upload files (PDF, DOCX, TXT, CSV, XLS, XLSX) or enter URLs to scrape
- Click "Process & Build Knowledge Graph" to:
- Extract text from your sources
- Build a knowledge graph using LLM-based entity extraction
- Create a vector index for semantic search
### 3. Chat
- Ask questions about your ingested data
- The chatbot will provide **strict** answers only based on your uploaded content
- If the answer isn't in your data, it will explicitly say so
### Features
- **Knowledge Graph Queries**: Direct Cypher queries to find entities and relationships
- **Vector Semantic Search**: Dense vector similarity search for relevant content
- **Hybrid Intelligence**: Combines structured graph data with unstructured document content
- **Source Attribution**: Answers include references to source files/URLs
- **Strict Mode**: Only answers from your ingested data, no hallucination
- **Entity Extraction**: Automatically identifies people, organizations, locations, events
- **Relationship Mapping**: Discovers and queries connections between entities
- **Batch Processing**: Handles large document collections efficiently
### Requirements
- Neo4j database (Neo4j Aura or self-hosted)
- API key for Cohere or Google Gemini
- Documents or URLs to process
### Required Packages for Kaggle
Run this in a Kaggle cell before using the interface:
```python
!pip install gradio langchain neo4j beautifulsoup4 requests python-dotenv
!pip install langchain-community langchain-experimental
!pip install langchain-google-genai cohere
!pip install json-repair # Required for knowledge graph extraction
!pip install unstructured[all-docs] # For better document parsing
```
### For Kaggle Notebooks
This interface is optimized for Kaggle notebooks. Make sure to:
1. Install required packages in your notebook
2. Set up your API keys as environment variables or enter them in the interface
3. Use a cloud-hosted Neo4j instance (like Neo4j Aura)
""")
return demo
# ===============================
# Main Function
# ===============================
if __name__ == "__main__":
demo = create_interface()
demo.launch(
share=True, # Create a public link for sharing
debug=True,
server_name="0.0.0.0", # Allow external connections
server_port=7860
) |