medrax2 / medrax /tools

Commit History

feat: Enable RoentGen-v2 synthetic X-ray generation
8dd90e9

samwell Claude commited on

fix: Downgrade transformers to 4.51.3 to fix grounding tool
37bdbfa

samwell Claude commited on

fix: Load grounding model without dtype parameter to avoid errors
e7a5afc

samwell Claude commited on

fix: Update grounding tool for transformers 4.56.0 and fix DICOM segmentation
99d91bc

samwell Claude commited on

fix: Don't invert processed DICOM files for segmentation
8bb9754

samwell Claude commited on

fix: Upgrade transformers to 4.56.0 to fix NV-Reason-CXR dtype error
6a7c30f

samwell Claude commited on

fix: Load NV-Reason-CXR without dtype parameter to avoid JSON error
7a6a9a6

samwell Claude commited on

fix: Use 'dtype' instead of deprecated 'torch_dtype' for NV-Reason-CXR
f49ba8b

samwell Claude commited on

fix: Invert PNG/JPEG X-rays before HU conversion for accurate segmentation
85e170b

samwell Claude commited on

debug: Add verbose logging to NV-Reason-CXR loading
e88cf5f

samwell Claude commited on

fix: Match NVIDIA's official NV-Reason-CXR loading approach
c1c4dbf

samwell Claude commited on

fix: Remove quantization parameters from NV-Reason-CXR to fix dict.to_dict() error
90107a8

samwell Claude commited on

refactor: Simplify segmentation to single overlay panel
0e36bfb

samwell Claude commited on

fix: Use correct Hounsfield Unit range for torchxrayvision segmentation
f6108da

samwell Claude commited on

debug: Add comprehensive logging for segmentation pipeline
940e3ae

samwell Claude commited on

fix: Add 3-panel diagnostic visualization for segmentation
6d677d9

samwell Claude commited on

fix: Lower segmentation threshold and add probability debugging
7f44ee5

samwell Claude commited on

fix: Enhanced segmentation overlay with contours and better alignment
89eb957

samwell Claude commited on

fix: Improve segmentation overlay and add DICOM support
3a18164

samwell Claude commited on

Fix NV-Reason-CXR quantization config error
f1877c8

samwell Claude commited on

Fix MAIRA-2 grounding tool - remove BitsAndBytesConfig
39ab112

samwell Claude commited on

Fix remaining tool loading issues
55abc5d

samwell Claude commited on

Fix multiple tool loading issues
4df7c2f

samwell Claude commited on

Fix tool loading errors in MedRAX2
b8918e3

samwell Claude commited on

Add NVIDIA NV-Reason-CXR tool for expert chest X-ray analysis
27f1dea

samwell commited on

Use backwards-compatible langchain.chains import for RetrievalQA
d32145b

samwell commited on

Fix RetrievalQA import to use langchain_community.chains
f65bee4

samwell commited on

Fix all deprecated langchain imports to use new module structure
24627d1

samwell commited on

Merge branch 'main' into tool-changes
e4e9fae

VictorLJZ commited on

fixes
d38594f

Junzhe Li commited on

tool changes
b8b11e0

Junzhe Li commited on

CLI/env/SLURM-aware resolver
0ad1012

Emily Xie commited on

Configurable MedGemma API URL and auto-pick free loopback IP/port
c4d7934

Emily Xie commited on

Fix merge conflicts
128b355

Adibvafa commited on

Improve style
7393de8

Adibvafa commited on

Fix merge conflicts
5b96cf3

Adibvafa commited on

Add parallel tool calling
77eeeb6

Adibvafa commited on

fixed rexvqa benchmark and added handling for image norm for tools
16278b5

victorli commited on

MedGemma fixes
b2aba7d

Emily Xie commited on

Fix env loading of MedGemma
c34de72

Adibvafa commited on

Add env loading for HF
d280bf3

Adibvafa commited on

fixed medgemma
7b3e756

victorli commited on

fixed up some things and corrected agent init logic
fbcbf94

victorli commited on

Merge branch 'main' into emily/medgemma
4c987e5

VictorLJZ commited on

Delete medrax/tools/vqa/medgemma/medgemma_requirements.txt
c94d452

Emily Xie commited on

standard req medgemma env
547624d

Emily Xie commited on

Update medgemma.py
1dd8f9f

Emily Xie commited on

Update medgemma_client.py
b3d2946

Emily Xie commited on

fix bug
d51b788

Emily Xie commited on

medgemma fastapi tool integration
205758b

Emily Xie commited on