canergen commited on
Commit
9891cdb
·
verified ·
1 Parent(s): 25c0796

Update README.md

Browse files
Files changed (1) hide show
  1. README.md +7 -7
README.md CHANGED
@@ -20,18 +20,18 @@ This is an open science initiative, please contribute your own models to allow t
20
  scvi-tools offers a comprehensive suite of models designed to address various challenges in single-cell data analysis.
21
 
22
  ### **Current HubModels**
23
- - **[scVI](https://docs.scvi-tools.org/en/stable/user_guide/models.html#scvi)**:
24
  - A variational autoencoder for dimensionality reduction, batch correction, and clustering.
25
  - Ideal for processing single-cell RNA-seq data.
26
- - **[SCANVI](https://docs.scvi-tools.org/en/stable/user_guide/models.html#scanvi)**:
27
  - A semi-supervised model designed for label prediction, especially in cases of partially labeled data.
28
- - **[TOTALVI](https://docs.scvi-tools.org/en/stable/user_guide/models.html#totalvi)**:
29
  - A multi-modal model for joint analysis of RNA and protein data, additionally allowing imputation of missing protein data.
30
- - **[MultiVI](https://docs.scvi-tools.org/en/stable/user_guide/models.html#multivi)**:
31
  - A multi-modal model for joint analysis of RNA, ATAC and protein data, enabling integrative insights from diverse omics data.
32
- - **[DestVI](https://docs.scvi-tools.org/en/stable/user_guide/models.html#destvi)**:
33
- - A deconvolution model for prediction of single-cell profiles given subcellular spatial transcriptomics data. We provide here pre-trained single cell models.
34
- - **[Stereoscope](https://docs.scvi-tools.org/en/stable/user_guide/models.html#stereoscope)**:
35
  - A deconvolution model for prediction of cell-type composition given subcellular spatial transcriptomics data. We provide here pre-trained single cell models.
36
 
37
  Explore the full list of models in scvi-tools in our **[user guide](https://docs.scvi-tools.org/en/stable/user_guide/index.html)**.
 
20
  scvi-tools offers a comprehensive suite of models designed to address various challenges in single-cell data analysis.
21
 
22
  ### **Current HubModels**
23
+ - **[scVI](https://docs.scvi-tools.org/en/stable/user_guide/models/scvi.html)**:
24
  - A variational autoencoder for dimensionality reduction, batch correction, and clustering.
25
  - Ideal for processing single-cell RNA-seq data.
26
+ - **[SCANVI](https://docs.scvi-tools.org/en/stable/user_guide/models/scanvi.html)**:
27
  - A semi-supervised model designed for label prediction, especially in cases of partially labeled data.
28
+ - **[TOTALVI](https://docs.scvi-tools.org/en/stable/user_guide/models/totalvi.html)**:
29
  - A multi-modal model for joint analysis of RNA and protein data, additionally allowing imputation of missing protein data.
30
+ - **[MultiVI](https://docs.scvi-tools.org/en/stable/user_guide/models/multivi.html)**:
31
  - A multi-modal model for joint analysis of RNA, ATAC and protein data, enabling integrative insights from diverse omics data.
32
+ - **[DestVI](https://docs.scvi-tools.org/en/stable/user_guide/models/destvi.html)**:
33
+ - A deconvolution model for prediction of single-cell profiles given subcellular spatial transcriptomics data. We provide here pre-trained single cell models (CondSCVI).
34
+ - **[Stereoscope](https://docs.scvi-tools.org/en/stable/user_guide/models/stereoscope.html)**:
35
  - A deconvolution model for prediction of cell-type composition given subcellular spatial transcriptomics data. We provide here pre-trained single cell models.
36
 
37
  Explore the full list of models in scvi-tools in our **[user guide](https://docs.scvi-tools.org/en/stable/user_guide/index.html)**.