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Update app.py
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app.py
CHANGED
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@@ -17,11 +17,12 @@ def predict(input_mol, view_str, chains):
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chain_dict = json.loads(chains)
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print(chain_dict)
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# sort keys in dict and add colors to chain_str
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for chain in sorted(chain_dict.keys()):
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chain_str += f" {chain_dict[chain]}"
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-
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os.system(f"cellscape cartoon --pdb {input_mol.name} --outline chain --colors {chain_str} --depth flat --back_outline --view view_matrix --save outline_all.svg")
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#read content of file
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chain_dict = json.loads(chains)
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print(chain_dict)
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print(type(chain_dict))
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# sort keys in dict and add colors to chain_str
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for chain in sorted(chain_dict.keys()):
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chain_str += f" {chain_dict[chain]}"
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print(chain_str, "chainstring")
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os.system(f"cellscape cartoon --pdb {input_mol.name} --outline chain --colors {chain_str} --depth flat --back_outline --view view_matrix --save outline_all.svg")
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#read content of file
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