Spaces:
Runtime error
Runtime error
Commit
·
724629c
1
Parent(s):
bbf797a
Create app.py
Browse files
app.py
ADDED
|
@@ -0,0 +1,33 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import gradio as gr
|
| 2 |
+
import torch
|
| 3 |
+
from transformers import AutoFeatureExtractor, AutoModelForImageClassification
|
| 4 |
+
from PIL import Image
|
| 5 |
+
|
| 6 |
+
from ensemble_transformers import EnsembleModelForImageClassification
|
| 7 |
+
ensemble = EnsembleModelForImageClassification.from_multiple_pretrained(
|
| 8 |
+
"tcvrishank/histo_train_vit", "tcvrishank/histo_train_segformer", "tcvrishank/histo_train_swin"
|
| 9 |
+
)
|
| 10 |
+
|
| 11 |
+
candidate_labels = ["Benign", "InSitu", "Invasive", "Normal"]
|
| 12 |
+
|
| 13 |
+
def return_prediction(image):
|
| 14 |
+
|
| 15 |
+
with torch.no_grad():
|
| 16 |
+
outputs = ensemble(image, mean_pool = True)
|
| 17 |
+
|
| 18 |
+
logits = outputs.logits[0]
|
| 19 |
+
probs = logits.softmax(dim=-1).numpy()
|
| 20 |
+
scores = probs.tolist()
|
| 21 |
+
|
| 22 |
+
result = [
|
| 23 |
+
{"score": score, "label": candidate_label}
|
| 24 |
+
for score, candidate_label in sorted(zip(probs, candidate_labels), key=lambda x: -x[0])
|
| 25 |
+
]
|
| 26 |
+
result = result[0]
|
| 27 |
+
final = f"This histopathology image shows cells that are {round(result['score'] * 100, 2)}% certain to be {result['label']}."
|
| 28 |
+
return final
|
| 29 |
+
|
| 30 |
+
|
| 31 |
+
demo = gr.Interface(fn=return_prediction, inputs="image", outputs="text")
|
| 32 |
+
|
| 33 |
+
demo.launch(share = True)
|