aviwind-guardian-trainer / src /randomforest.py
teckytim's picture
Make spatial tree resolution tunable
0ae7d04 verified
Raw
History Blame Contribute Delete
8.62 kB
from joblib import Parallel, delayed, dump, load
import numpy as np
from scipy.stats import mode
from sklearn.datasets import load_iris
from sklearn.model_selection import KFold
from sklearn.metrics import accuracy_score
from src.decisiontreeclassifier import DecisionTreeClassifier
from sklearn.preprocessing import LabelEncoder
import pandas as pd
from sklearn.model_selection import ParameterGrid
from sklearn.ensemble import ExtraTreesClassifier
from shapely.geometry import Point, Polygon
import multiprocessing
class RandomForest:
def __init__(self, n_estimators=400, max_features=1.0,
min_samples_leaf=2, random_state=42):
self.n_estimators = n_estimators
self.max_features = max_features
self.min_samples_leaf = min_samples_leaf
self.random_state = random_state
self.model = None
self.minimum_collision_count = 2
self.decision_threshold = 50.0
@staticmethod
def _engineer_features(X):
X = np.asarray(X, dtype=float)
longitude = X[:, 0]
latitude = X[:, 1]
lon_rad = np.radians(longitude)
lat_rad = np.radians(latitude)
return np.column_stack([
longitude,
latitude,
np.sin(lon_rad),
np.cos(lon_rad),
np.sin(lat_rad),
np.cos(lat_rad),
longitude * latitude,
longitude ** 2,
latitude ** 2,
])
def fit(self, X, y):
# A single proximity record is nearly uniform across the country and is
# not learnable from location. Model elevated/repeated activity instead.
binary_y = (np.asarray(y, dtype=float) >= self.minimum_collision_count).astype(int)
engineered_X = self._engineer_features(X)
self.model = ExtraTreesClassifier(
n_estimators=self.n_estimators,
max_features=self.max_features,
min_samples_leaf=self.min_samples_leaf,
class_weight="balanced",
n_jobs=-1,
random_state=self.random_state,
)
self.model.fit(engineered_X, binary_y)
dump(self, 'random_forest_model.joblib')
print("Model saved to random_forest_model.joblib")
return self
def predict(self, X):
if isinstance(X, pd.DataFrame):
X = X.to_numpy()
if self.model is None:
raise RuntimeError("The collision-risk model has not been trained.")
return self.model.predict_proba(self._engineer_features(X))[:, 1] * 100.0
def predict_with_location(self, X_df):
points_df = X_df[X_df['Type'] == 'Point']
# Assuming 'polygons_df' has been correctly filtered to include only polygon rows
polygons_df = X_df[(X_df['Type'] == 'Polygon') | (X_df['group'].isin(X_df[X_df['Type'] == 'Polygon']['group'])) & (X_df['Type'] != 'Point')]
for index, row in points_df.iterrows():
latitude, longitude = row['Latitude'], row['Longitude']
point = np.array([[longitude, latitude]])
X_df.at[index, 'Prediction'] = self.predict(point)[0]
grouped_polygons = polygons_df.groupby('group')
for group_number, group_df in grouped_polygons:
polygon_coords = [(x, y) for x, y in zip(group_df['Longitude'], group_df['Latitude'])]
polygon = Polygon(polygon_coords)
minx, miny, maxx, maxy = polygon.bounds
sumOfPredictions = 0
count = 0
for lat in np.arange(miny, maxy, 1/69):
for lon in np.arange(minx, maxx, 1/(np.cos(np.radians(lat)) * 69)):
if polygon.contains(Point(lon, lat)):
point = np.array([[lon, lat]])
sumOfPredictions += self.predict(point)[0]
count += 1
# Update the prediction for this group in X_df
if count > 0:
average_prediction = sumOfPredictions / count
# Find rows belonging to this group and update
X_df.loc[X_df['group'] == group_number, 'Prediction'] = average_prediction
return X_df
def load_model(self, filename):
try:
return load(filename)
except Exception as e:
print("Model not found. Exception:", str(e))
return None
def train_tree(self, indices, X, y, max_features, n_features, random_state):
np.random.seed(random_state) # Ensure reproducibility for each tree
X_subset, y_subset = X[indices], y[indices]
features_indices = np.random.choice(n_features, size=max_features, replace=False)
tree = DecisionTreeClassifier(min_samples_split=25, max_depth=25, feature_selection_strategy='sqrt')
#tree = DecisionTreeClassifier(min_samples_split=1, max_depth=1, feature_selection_strategy='sqrt')
tree.fit(X_subset[:, features_indices], y_subset)
return tree, features_indices # Return a tuple of the tree and its feature indices
def evaluate_model_with_kfold(self, X, y, n_splits=5):
kf = KFold(n_splits=n_splits, shuffle=True, random_state=42)
accuracies = []
for train_index, test_index in kf.split(X):
X_train, X_test = X[train_index], X[test_index]
y_train, y_test = y[train_index], y[test_index]
model = RandomForest(n_estimators=10, max_features='sqrt', random_state=42)
model.fit(X_train, y_train)
predictions = (model.predict(X_test) >= 50).astype(int)
accuracy = accuracy_score((y_test >= self.minimum_collision_count).astype(int), predictions)
accuracies.append(accuracy)
return np.mean(accuracies), np.std(accuracies)
def model_predict(self, X_set: np.array) -> np.array:
"""Returns the predicted labels for a given data set"""
pred_probs = self.predict_proba(X_set)
preds = np.argmax(pred_probs, axis=1)
return preds
#To make a prediction with a list of trained base learners, we will average the predicted probabilities for each class of every base learner.
#The average will be the predicted probability of the random forest model.
def _predict_proba_w_base_learners(self, X_set: np.array) -> list:
"""
Creates list of predictions for all base learners
"""
pred_prob_list = []
for base_learner in self.base_learner_list:
pred_prob_list.append(base_learner.predict_proba(X_set))
return pred_prob_list
def predict_proba(self, X_set: np.array) -> list:
"""Returns the predicted probs for a given data set"""
pred_probs = []
base_learners_pred_probs = RandomForest._predict_proba_w_base_learners(X_set)
# Average the predicted probabilities of base learners
for obs in range(X_set.shape[0]):
base_learner_probs_for_obs = [a[obs] for a in base_learners_pred_probs]
# Calculate the average for each index
obs_average_pred_probs = np.mean(base_learner_probs_for_obs, axis=0)
pred_probs.append(obs_average_pred_probs)
return pred_probs
def grid_search_cv(self, X, y, param_grid, n_splits=5):
best_score = 0
best_params = None
for params in ParameterGrid(param_grid):
print("Evaluating parameters:", params)
model = DecisionTreeClassifier(
max_depth=params['max_depth'],
min_samples_split=params['min_samples_split'],
feature_selection_strategy=params['feature_selection_strategy']
)
# Use your evaluate_model_with_kfold or similar function
mean_accuracy, _ = RandomForest.evaluate_model_with_kfold_test(X, y, model, n_splits=n_splits)
print(f"Mean Accuracy: {mean_accuracy}")
if mean_accuracy > best_score:
best_score = mean_accuracy
best_params = params
return best_score, best_params
def evaluate_model_with_kfold_test(self, X, y, model, n_splits=2):
kf = KFold(n_splits=n_splits, shuffle=True, random_state=42)
accuracies = []
for train_index, test_index in kf.split(X):
X_train, X_test = X[train_index], X[test_index]
y_train, y_test = y[train_index], y[test_index]
model.fit(X_train, y_train)
predictions = model.predict(X_test)
accuracy = accuracy_score(y_test, predictions)
accuracies.append(accuracy)
return np.mean(accuracies), np.std(accuracies)