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History: 20 commits

Codex

Public-data VUS-reclassification benchmark — 200 variants

161420e 9 days ago

__init__.py

0 Bytes
Initial VariantLens clinical readiness scaffold 28 days ago
adjudicate_discordances.py

5.76 kB
Reach 89% deterministic concordance + add air-gap and governance scaffolding 27 days ago
build_alphamissense_db.py

4.31 kB
Initial VariantLens clinical readiness scaffold 28 days ago
build_revel_db.py

4.06 kB
Initial VariantLens clinical readiness scaffold 28 days ago
build_vus_reclassification_benchmark.py

19.5 kB
Public-data VUS-reclassification benchmark — 200 variants 9 days ago
clinical_preflight.py

3.1 kB
Add on-prem clinical deployment scaffold 16 days ago
dev.sh

950 Bytes
Initial VariantLens clinical readiness scaffold 28 days ago
gnomad_batch_validate.py

7.2 kB
Reach 89% deterministic concordance + add air-gap and governance scaffolding 27 days ago
md_to_pdf.py

13.4 kB
Fix author name: Theo Sevitt (not David) 14 days ago
measure_fulltext_coverage.py

5.66 kB
Wire full-stack RAG into HF Space + close legal coverage gaps 14 days ago
per_gene_breakdown.py

6.5 kB
Add per-gene / per-variant-type validation breakdown script 16 days ago
replay_validation.py

10.7 kB
Error-analysis writeup + replay improvements 12 days ago
run_validation.py

6.49 kB
Add 1000-variant ClinVar validation fixture + stratified seeding script 16 days ago
scan_vus_for_new_papers.py

9.36 kB
Add VUS re-classification monitoring scanner 13 days ago
seed_demo_vus.py

3.9 kB
Fix reclassify dashboard: include scripts/ in image + seed demo VUS 13 days ago
seed_eval_set.py

7.46 kB
Initial VariantLens clinical readiness scaffold 28 days ago
seed_eval_set_1k.py

11.2 kB
Add 1000-variant ClinVar validation fixture + stratified seeding script 16 days ago
seed_panel_fixture.py

8.45 kB
Lab-panel baselines: kidney 96.5%, HCT 85.4% + PKD2 BP4 cap 14 days ago
smoke_compare.py

5.05 kB
50-variant smoke test: RAG nets +7 / 0 regressions with tightened prompt 15 days ago
sync_tunnel_to_vercel.sh

3.25 kB
Cloudflare-tunnel sync script + remove demo-mode build override 27 days ago
validate_ollama.py

5.17 kB
Reach 89% deterministic concordance + add air-gap and governance scaffolding 27 days ago
warm_gnomad_cache.py

2.22 kB
Initial VariantLens clinical readiness scaffold 28 days ago
warm_omim_cache.py

2.51 kB
OMIM caching + startup pre-warm for kidney/HCT genes 12 days ago