Spaces:
Running
Running
File size: 24,916 Bytes
3d46076 3865888 ee1153c 3d46076 ee1153c 3d46076 ee1153c 3d46076 3865888 3d46076 ee1153c 3d46076 ee1153c 3d46076 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 | <!DOCTYPE html>
<html lang="en">
<head>
<meta charset="UTF-8">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>FlyBrain Lab — Biological Connectome Research Platform</title>
<script src="/static/vendor/three.min.js"></script>
<script src="/static/vendor/OrbitControls.js"></script>
<link rel="stylesheet" href="/static/css/lab.css">
</head>
<body>
<header>
<div class="brand">
<div class="brand-logo">FB</div>
<div>
<div class="brand-title">FlyBrain Lab</div>
<div class="brand-subtitle">Janelia MaleCNS v1.0 Biological Research Workstation</div>
</div>
</div>
<div class="header-meta">
<span class="badge badge-state" id="sim-status-badge"><span class="dot-pulse"></span><span id="sim-status-text">PAUSED</span></span>
<span class="badge badge-gpu" id="backend-badge">Detecting backend…</span>
<span class="badge badge-state" id="provenance-badge" title="Loading live provenance from /api/provenance…">Loading provenance…</span>
<button class="btn btn-green" id="btn-toggle-sim" onclick="toggleSimulation()">▶ Start Simulation</button>
<button class="btn" onclick="stepSimulation(1)">+1 Step</button>
<button class="btn" onclick="stepSimulation(10)">+10 Steps</button>
</div>
</header>
<nav>
<button class="nav-tab active" onclick="switchTab('overview')">Overview</button>
<button class="nav-tab" onclick="switchTab('world')">World</button>
<button class="nav-tab" onclick="switchTab('stream')">Live Stream</button>
<button class="nav-tab" onclick="switchTab('connectome')">Connectome 3D</button>
<button class="nav-tab" onclick="switchTab('colony')">Colony</button>
<button class="nav-tab" onclick="switchTab('provenance')">Provenance</button>
<button class="nav-tab" onclick="switchTab('experiments')">Experiments & Determinism</button>
<button class="nav-tab" onclick="switchTab('memory')">Memory Explorer</button>
<button class="nav-tab" onclick="switchTab('evolution')">Evolution Lineage</button>
<button class="nav-tab" onclick="switchTab('dreams')">Dream Studio</button>
<button class="nav-tab" onclick="switchTab('backups')">Backups</button>
<button class="nav-tab" onclick="switchTab('diagnostics')">Diagnostics & Hardware</button>
</nav>
<main>
<!-- Tab: Embodied 3D World (server-authoritative MuJoCo; browser renders) -->
<div id="tab-world" class="tab-content">
<div class="viewer-container">
<div id="world-canvas-wrapper">
<canvas id="world-canvas"></canvas>
<div class="viewer-controls-overlay">
<label style="font-size: 11px; color: var(--text-dim);">Camera:</label>
<select id="world-cam" onchange="worldCamMode=this.value">
<option value="third">Third-person</option>
<option value="first">First-person</option>
<option value="observer">Observer</option>
<option value="free">Free orbit</option>
</select>
<label style="font-size: 11px; color: var(--text-dim);"><input type="checkbox" id="world-debug" onchange="worldDebug=this.checked"> Debug</label>
<button class="btn" onclick="worldStep(5)">+ Step</button>
<button class="btn" onclick="worldDream(false)">Dream</button>
<button class="btn" onclick="worldDream(true)">Dream+Image</button>
</div>
</div>
<div class="inspector-panel">
<div style="font-size: 14px; font-weight: 700; border-bottom: 1px solid var(--border-subtle); padding-bottom: 8px;">Organism</div>
<div class="inspector-row"><span class="inspector-label">Goal</span><span class="inspector-val" id="w-goal">—</span></div>
<div class="inspector-row"><span class="inspector-label">Energy / Hunger</span><span class="inspector-val" id="w-needs">—</span></div>
<div class="inspector-row"><span class="inspector-label">Location</span><span class="inspector-val" id="w-loc">—</span></div>
<div class="inspector-row"><span class="inspector-label">World time</span><span class="inspector-val" id="w-time">—</span></div>
<div class="inspector-row"><span class="inspector-label">Models</span><span class="inspector-val" id="w-models">—</span></div>
<div style="display: flex; gap: 6px; margin-top: 10px;">
<input type="text" id="w-say-text" placeholder="Say something…" style="flex: 1;">
<button class="btn btn-green" onclick="worldSay()">Speak</button>
</div>
<div style="display: flex; gap: 6px; margin-top: 6px;">
<input type="text" id="w-imagine-text" placeholder="Imagine…" style="flex: 1;">
<button class="btn" onclick="worldImagine()">Imagine</button>
</div>
<div id="w-friends" style="margin-top: 10px; font-size: 12px;"></div>
<canvas id="world-minimap" width="220" height="220" style="margin-top: 10px; border: 1px solid var(--border-subtle); border-radius: 8px;"></canvas>
</div>
</div>
</div>
<!-- Tab 1: Overview -->
<div id="tab-overview" class="tab-content active">
<div class="grid-overview">
<div class="card">
<div class="card-header"><span>Simulation Step</span><span id="stat-latency">0.0 ms</span></div>
<div class="card-value" id="stat-step">0</div>
<div class="card-subtext" id="stat-speed">Throughput: 0 steps/sec</div>
</div>
<div class="card">
<div class="card-header"><span>Active Spikes (LIF)</span><span>Threshold 1.0</span></div>
<div class="card-value" id="stat-spikes" style="color: var(--accent-cyan);">0</div>
<div class="card-subtext" id="stat-total-spikes">Cumulative Spikes: 0</div>
</div>
<div class="card">
<div class="card-header"><span>Mean Activation / Potential</span><span>Leaky Integrator</span></div>
<div class="card-value" id="stat-act">0.0000</div>
<div class="card-subtext" id="stat-pot">Potential: 0.000 mV</div>
</div>
<div class="card">
<div class="card-header"><span>Active Motor Efferent</span><span>Top Population</span></div>
<div class="card-value" id="stat-action" style="color: var(--accent-green);">explore</div>
<div class="card-subtext" id="stat-pred-error">Prediction Error: 0.000</div>
</div>
</div>
<div style="display: grid; grid-template-columns: 2fr 1fr; gap: 20px;">
<div class="card">
<div class="card-header"><span>Homeostatic Drive Regulation</span><span>Energy, Curiosity, Social, Integrity</span></div>
<div style="display: grid; grid-template-columns: repeat(4, 1fr); gap: 12px; margin-top: 14px;">
<div>
<div style="font-size: 11px; color: var(--text-dim);">Energy</div>
<div style="font-size: 20px; font-weight: bold; color: var(--accent-amber);" id="drive-energy">1.00</div>
</div>
<div>
<div style="font-size: 11px; color: var(--text-dim);">Curiosity</div>
<div style="font-size: 20px; font-weight: bold; color: var(--accent-cyan);" id="drive-curiosity">0.80</div>
</div>
<div>
<div style="font-size: 11px; color: var(--text-dim);">Social</div>
<div style="font-size: 20px; font-weight: bold; color: var(--accent-purple);" id="drive-social">0.50</div>
</div>
<div>
<div style="font-size: 11px; color: var(--text-dim);">Integrity</div>
<div style="font-size: 20px; font-weight: bold; color: var(--accent-green);" id="drive-integrity">1.00</div>
</div>
</div>
</div>
<div class="card">
<div class="card-header"><span>Active Sensory Stimulus</span><span>Direct Injection</span></div>
<div style="display: flex; gap: 8px; margin-top: 10px;">
<button class="btn" onclick="injectSensory('visual', 1.5)">Stimulate Vision</button>
<button class="btn" onclick="injectSensory('auditory', 1.2)">Stimulate Audio</button>
<button class="btn btn-green" onclick="injectReward(1.0)">+Reward</button>
</div>
</div>
</div>
</div>
<!-- Tab: Live Stream (24/7 mode) -->
<div id="tab-stream" class="tab-content">
<div class="card" style="margin-bottom: 20px;">
<div class="card-header"><span>24/7 Stream Control</span><span id="stream-mode-badge" class="badge badge-state">STOPPED</span></div>
<div class="prov-grid">
<div class="prov-row"><span class="prov-label">Uptime</span><span class="prov-val" id="stream-uptime">—</span></div>
<div class="prov-row"><span class="prov-label">Simulation step</span><span class="prov-val" id="stream-step">—</span></div>
<div class="prov-row"><span class="prov-label">Spikes / latency p95</span><span class="prov-val" id="stream-perf">—</span></div>
<div class="prov-row"><span class="prov-label">Watchdog</span><span class="prov-val" id="stream-watchdog">—</span></div>
</div>
<div style="display: flex; gap: 8px; margin-top: 12px; flex-wrap: wrap;">
<button class="btn btn-green" onclick="streamCmd('start')">▶ START</button>
<button class="btn btn-amber" onclick="streamCmd('pause')">⏸ PAUSE</button>
<button class="btn" onclick="streamCmd('resume')">⏵ RESUME</button>
<button class="btn btn-red" onclick="streamCmd('stop')">⏹ STOP</button>
<button class="btn" onclick="stepSimulation(1)">+1 STEP</button>
</div>
</div>
</div>
<!-- Tab: Colony (organisms) -->
<div id="tab-colony" class="tab-content">
<div class="card" style="margin-bottom: 20px;">
<div class="card-header"><span>ALife Colony</span><span id="colony-meta">—</span></div>
<div style="margin-top: 10px; display: flex; gap: 8px; flex-wrap: wrap;">
<button class="btn btn-green" onclick="colonyCmd('step')">+ Step 5 ticks</button>
<button class="btn" onclick="colonyCmd('reproduce')">+ Reproduce</button>
<button class="btn btn-amber" onclick="colonyCmd('reset')">Reset colony</button>
</div>
</div>
<div class="card">
<div class="card-header"><span>Organisms (live state)</span><span>sort/filter in place</span></div>
<table style="margin-top: 10px;">
<thead><tr><th>ID</th><th>Gen</th><th>Stage</th><th>Alive</th><th>Age</th><th>Energy</th><th>Neurons</th><th>Genome</th></tr></thead>
<tbody id="tbody-colony"></tbody>
</table>
</div>
</div>
<!-- Tab 2: Connectome 3D -->
<div id="tab-connectome" class="tab-content">
<div class="viewer-container">
<div id="connectome-canvas-wrapper">
<canvas id="connectome-canvas"></canvas>
<div class="viewer-controls-overlay">
<label style="font-size: 11px; color: var(--text-dim);">Side:</label>
<select id="filter-side" onchange="filterConnectome()">
<option value="ALL">All Hemispheres</option>
<option value="L">Left (L)</option>
<option value="R">Right (R)</option>
<option value="M">Midline (M)</option>
</select>
<label style="font-size: 11px; color: var(--text-dim);">Search Body ID:</label>
<input type="text" id="search-body-id" placeholder="e.g. 187792" style="width: 120px;" onkeydown="if(event.key==='Enter') searchNeuron()">
<button class="btn" onclick="resetCamera()">Reset View</button>
</div>
</div>
<div class="inspector-panel" id="inspector-card">
<div style="font-size: 14px; font-weight: 700; border-bottom: 1px solid var(--border-subtle); padding-bottom: 8px;">
Neuron Inspector
</div>
<div class="inspector-row"><span class="inspector-label">Body ID</span><span class="inspector-val" id="insp-body-id">Select a neuron</span></div>
<div class="inspector-row"><span class="inspector-label">Internal Index</span><span class="inspector-val" id="insp-idx">-</span></div>
<div class="inspector-row"><span class="inspector-label">Hemisphere Side</span><span class="inspector-val" id="insp-side">-</span></div>
<div class="inspector-row"><span class="inspector-label">Presynaptic T-Bars</span><span class="inspector-val" id="insp-tbars">-</span></div>
<div class="inspector-row"><span class="inspector-label">Membrane Potential</span><span class="inspector-val" id="insp-pot">-</span></div>
<div class="inspector-row"><span class="inspector-label">Spike State (LIF)</span><span class="inspector-val" id="insp-spk">-</span></div>
<div class="inspector-row"><span class="inspector-label">Current Activation</span><span class="inspector-val" id="insp-act">-</span></div>
<div class="inspector-row"><span class="inspector-label">3D Coordinates (nm)</span><span class="inspector-val" id="insp-coords">-</span></div>
<div style="font-size: 11px; color: var(--text-dim); line-height: 1.4; margin-top: 10px;">
Click any soma sphere in the 3D viewer to query real biological EM provenance, coordinates, and live membrane potential.
</div>
</div>
</div>
</div>
<!-- Tab: Scientific Provenance (live from /api/provenance) -->
<div id="tab-provenance" class="tab-content">
<div class="card" style="margin-bottom: 20px;">
<div class="card-header"><span>Scientific Status — live backend contract</span><span id="prov-graph-identity" class="badge badge-state">loading…</span></div>
<div class="prov-grid">
<div class="prov-row"><span class="prov-label">Graph</span><span class="prov-val" id="prov-graph">—</span></div>
<div class="prov-row"><span class="prov-label">Sampling</span><span class="prov-val" id="prov-sampling">—</span></div>
<div class="prov-row"><span class="prov-label">Synaptic weights</span><span class="prov-val" id="prov-weights">—</span></div>
<div class="prov-row"><span class="prov-label">Population annotation</span><span class="prov-val" id="prov-pops">—</span></div>
<div class="prov-row"><span class="prov-label">Dataset</span><span class="prov-val mono" id="prov-dataset">—</span></div>
<div class="prov-row"><span class="prov-label">Numerical validation</span><span class="prov-val" id="prov-numerics">trajectory parity (max abs diff < 1e-4), exact spike trains — NOT bit-exact</span></div>
<div class="prov-row"><span class="prov-label">Graph hash</span><span class="prov-val mono" id="prov-hash">—</span></div>
</div>
</div>
</div>
<!-- Tab 3: Experiments -->
<div id="tab-experiments" class="tab-content">
<div class="card" style="margin-bottom: 20px;">
<div class="card-header"><span>Launch Reproducible Research Experiment</span><span>Deterministic Manifest</span></div>
<div style="display: flex; gap: 14px; align-items: flex-end; margin-top: 12px;">
<div>
<div style="font-size: 11px; color: var(--text-dim); margin-bottom: 4px;">Graph Mode</div>
<select id="exp-mode">
<option value="REAL_SUBGRAPH">REAL_SUBGRAPH — sampled MaleCNS subgraph (recommended)</option>
<option value="REAL">REAL — legacy alias of REAL_SUBGRAPH</option>
<option value="SPATIAL_SURROGATE">MaleCNS Spatial Surrogate</option>
<option value="SYNTHETIC_TEST">Synthetic Test Circuit</option>
</select>
</div>
<div>
<div style="font-size: 11px; color: var(--text-dim); margin-bottom: 4px;">Neuron Scale</div>
<select id="exp-scale">
<option value="256">256 Neurons</option>
<option value="512">512 Neurons</option>
<option value="1024">1024 Neurons</option>
</select>
</div>
<div>
<div style="font-size: 11px; color: var(--text-dim); margin-bottom: 4px;">Seed</div>
<input type="number" id="exp-seed" value="42" style="width: 80px;">
</div>
<div>
<div style="font-size: 11px; color: var(--text-dim); margin-bottom: 4px;">Steps</div>
<input type="number" id="exp-steps" value="50" style="width: 80px;">
</div>
<button class="btn btn-green" onclick="runExperiment()">▶ Run Experiment</button>
</div>
</div>
<div class="card">
<div class="card-header"><span>Experiment History & Verification</span><span>Recorded SHA-256 Manifests</span></div>
<table id="table-experiments">
<thead>
<tr>
<th>Experiment ID</th>
<th>Mode</th>
<th>Neurons</th>
<th>Steps</th>
<th>Latency</th>
<th>Final State Hash</th>
<th>Action</th>
</tr>
</thead>
<tbody id="tbody-experiments"></tbody>
</table>
</div>
</div>
<!-- Tab 4: Memory -->
<div id="tab-memory" class="tab-content">
<div class="card">
<div class="card-header"><span>Episodic & Skill Memory Explorer</span><span>SQLite WAL Engine</span></div>
<div style="margin-bottom: 14px;">
<input type="text" id="memory-search" placeholder="Search episodic recollections..." style="width: 300px;" oninput="fetchMemory()">
</div>
<table id="table-episodes">
<thead>
<tr><th>ID</th><th>Step</th><th>Action</th><th>Reward</th><th>Prediction Error</th><th>Timestamp</th></tr>
</thead>
<tbody id="tbody-episodes"></tbody>
</table>
</div>
</div>
<!-- Tab 5: Evolution -->
<div id="tab-evolution" class="tab-content">
<div class="card" style="margin-bottom: 20px;">
<div class="card-header"><span>Autonomous Structural Evolution</span><span>Mutations, Evaluation & Rollback</span></div>
<div style="margin-top: 10px; display: flex; gap: 14px;">
<button class="btn btn-green" onclick="triggerEvolution()">+ Evolve New Generation</button>
<span style="font-size: 13px; color: var(--text-dim); align-self: center;" id="evo-meta-text">Generation 0</span>
</div>
</div>
<div class="card">
<div class="card-header"><span>Evolution Lineage Tree</span><span>Evaluated Variants</span></div>
<div id="evo-lineage-container" style="display: flex; flex-direction: column; gap: 12px; margin-top: 10px;"></div>
</div>
</div>
<!-- Tab 6: Dreams -->
<div id="tab-dreams" class="tab-content">
<div class="card" style="margin-bottom: 20px;">
<div class="card-header"><span>Offline Dream & Counterfactual Experience Replay</span><span>Consolidation Studio</span></div>
<div style="margin-top: 10px; display: flex; gap: 14px;">
<button class="btn" onclick="triggerDream('deterministic')">Run Deterministic Replay (Seed 42)</button>
<button class="btn btn-amber" onclick="triggerDream('exploratory')">Run Exploratory Dream</button>
</div>
</div>
<div class="card">
<div class="card-header"><span>Consolidated Dream Records</span><span>Counterfactual Simulations</span></div>
<div id="dreams-list" style="display: flex; flex-direction: column; gap: 10px; margin-top: 10px;"></div>
</div>
</div>
<!-- Tab: Backups -->
<div id="tab-backups" class="tab-content">
<div class="card" style="margin-bottom: 20px;">
<div class="card-header"><span>Backup Management (local disk)</span><span id="gdrive-badge" class="badge badge-state">drive: …</span></div>
<div style="margin-top: 10px; display: flex; gap: 8px; flex-wrap: wrap;">
<button class="btn btn-green" onclick="backupCreate()">⬇ BACKUP NOW</button>
<button class="btn" onclick="fetchBackups()">Refresh</button>
</div>
<div class="prov-val" id="gdrive-detail" style="margin-top: 8px; font-size: 12px;"></div>
</div>
<div class="card">
<div class="card-header"><span>Backup generations (hash-verified)</span><span>restore refuses corrupt/invalid</span></div>
<table style="margin-top: 10px;">
<thead><tr><th>Name</th><th>Trigger</th><th>Step</th><th>State hash</th><th>Actions</th></tr></thead>
<tbody id="tbody-backups"></tbody>
</table>
</div>
</div>
<!-- Tab 7: Diagnostics -->
<div id="tab-diagnostics" class="tab-content">
<div class="card" style="margin-bottom: 20px;">
<div class="card-header"><span>Host System & Physical Hardware</span><span>Live Discovery</span></div>
<div style="display: grid; grid-template-columns: repeat(3, 1fr); gap: 16px; margin-top: 12px;" id="diag-system-grid"></div>
</div>
<div class="card">
<div class="card-header"><span>Dataset Provenance & Cryptographic Hashes</span><span>Janelia MaleCNS v1.0</span></div>
<table style="margin-top: 10px;">
<tbody id="diag-hashes-tbody"></tbody>
</table>
</div>
</div>
</main>
<div id="toast-container"></div>
<script src="/static/js/lab.js"></script>
</body>
</html>
|