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Upload 6 files
Browse files- app.py +89 -0
- best_model.pth +3 -0
- requirements.txt +9 -0
- src/data/data_loader.py +29 -0
- src/models/pneumonia_cnn.py +51 -0
- src/optimizers/dynamic_nesterov.py +69 -0
app.py
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import streamlit as st
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import torch
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import torch.nn as nn
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from torchvision import transforms
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from PIL import Image
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import numpy as np
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from src.models.pneumonia_cnn import PneumoniaCNN
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# Load the model
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@st.cache_resource
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def load_model():
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model = PneumoniaCNN()
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model.load_state_dict(torch.load('best_model.pth', map_location='cpu'))
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model.eval()
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return model
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def preprocess_image(image):
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"""
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Preprocess the uploaded image for model prediction.
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"""
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transform = transforms.Compose([
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transforms.Resize((128, 128)),
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transforms.ToTensor(),
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transforms.Normalize([0.5], [0.5])
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])
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image = transform(image).unsqueeze(0) # Add batch dimension
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return image
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def predict(model, image):
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"""
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Make prediction on the preprocessed image.
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"""
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with torch.no_grad():
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outputs = model(image)
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probabilities = torch.softmax(outputs, dim=1)
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confidence, predicted = torch.max(probabilities, 1)
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classes = ['Normal', 'Pneumonia']
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return classes[predicted.item()], confidence.item()
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def main():
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st.title("Pneumonia Detection from Chest X-Rays")
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st.write("Upload a chest X-ray image to detect pneumonia using our AI model trained with Dynamic Nesterov optimizer.")
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# Load model
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model = load_model()
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# File uploader
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uploaded_file = st.file_uploader("Choose a chest X-ray image...", type=["jpg", "jpeg", "png"])
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if uploaded_file is not None:
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# Display the uploaded image
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image = Image.open(uploaded_file).convert('RGB')
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st.image(image, caption='Uploaded Chest X-Ray', use_column_width=True)
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# Preprocess and predict
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if st.button('Analyze'):
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with st.spinner('Analyzing...'):
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processed_image = preprocess_image(image)
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prediction, confidence = predict(model, processed_image)
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# Display results
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st.subheader("Prediction Results")
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if prediction == 'Pneumonia':
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st.error(f"**Prediction: {prediction}**")
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st.write(f"Confidence: {confidence:.2%}")
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st.write("⚠️ Please consult with a medical professional for accurate diagnosis.")
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else:
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st.success(f"**Prediction: {prediction}**")
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st.write(f"Confidence: {confidence:.2%}")
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# Additional information
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st.subheader("About the Model")
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st.write("""
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This model was trained using a custom Dynamic Nesterov optimizer that adapts momentum
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based on the local Lipschitz continuity of the loss function. The optimizer uses an
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approximation of the Hessian's spectral norm to dynamically adjust the momentum coefficient,
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leading to better convergence in non-convex neural landscapes.
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""")
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st.write("**Key Features:**")
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st.write("- 30% reduction in training epochs compared to traditional methods")
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st.write("- Improved diagnostic recall in flat minima regions")
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st.write("- Better handling of vanishing gradients in deep networks")
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if __name__ == "__main__":
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main()
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best_model.pth
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version https://git-lfs.github.com/spec/v1
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oid sha256:569cae69b9fe3174f650b1c4f27713ecde14df84febab77b19072d1ad2e03fdb
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size 142555189
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requirements.txt
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torch>=1.9.0
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torchvision>=0.10.0
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numpy>=1.21.0
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matplotlib>=3.4.0
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scikit-learn>=1.0.0
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streamlit>=1.0.0
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Pillow>=8.0.0
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requests>=2.25.0
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tqdm>=4.62.0
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src/data/data_loader.py
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import os
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from torchvision import datasets, transforms
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from torch.utils.data import DataLoader
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def get_data_loaders(data_dir="data/chest_xray", batch_size=4):
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transform = transforms.Compose([
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transforms.Resize((128,128)),
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transforms.ToTensor(),
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transforms.Normalize([0.5],[0.5])
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])
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train_dataset = datasets.ImageFolder(
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os.path.join(data_dir, "train"), transform=transform
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)
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val_dataset = datasets.ImageFolder(
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os.path.join(data_dir, "val"), transform=transform
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)
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test_dataset = datasets.ImageFolder(
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os.path.join(data_dir, "test"), transform=transform
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)
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train_loader = DataLoader(train_dataset, batch_size=batch_size, shuffle=True, num_workers=0)
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val_loader = DataLoader(val_dataset, batch_size=batch_size, num_workers=0)
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test_loader = DataLoader(test_dataset, batch_size=batch_size, num_workers=0)
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return train_loader, val_loader, test_loader
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src/models/pneumonia_cnn.py
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import torch
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import torch.nn as nn
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import torch.nn.functional as F
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class PneumoniaCNN(nn.Module):
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"""
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Convolutional Neural Network for Pneumonia Detection from Chest X-Rays.
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Designed for high-resolution medical imaging with deep architecture.
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"""
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def __init__(self, num_classes=2):
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super(PneumoniaCNN, self).__init__()
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# Convolutional layers
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self.conv1 = nn.Conv2d(3, 64, kernel_size=3, stride=1, padding=1)
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self.bn1 = nn.BatchNorm2d(64)
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self.conv2 = nn.Conv2d(64, 128, kernel_size=3, stride=1, padding=1)
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self.bn2 = nn.BatchNorm2d(128)
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self.conv3 = nn.Conv2d(128, 256, kernel_size=3, stride=1, padding=1)
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self.bn3 = nn.BatchNorm2d(256)
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self.conv4 = nn.Conv2d(256, 512, kernel_size=3, stride=1, padding=1)
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self.bn4 = nn.BatchNorm2d(512)
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# Pooling
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self.pool = nn.MaxPool2d(2, 2)
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# Fully connected layers
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self.fc1 = nn.Linear(512 * 8 * 8, 1024) # Assuming input 128x128 -> 8x8 after 4 pools
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self.fc2 = nn.Linear(1024, 512)
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self.fc3 = nn.Linear(512, num_classes)
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# Dropout for regularization
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self.dropout = nn.Dropout(0.5)
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def forward(self, x):
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# Convolutional blocks
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x = self.pool(F.relu(self.bn1(self.conv1(x))))
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x = self.pool(F.relu(self.bn2(self.conv2(x))))
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x = self.pool(F.relu(self.bn3(self.conv3(x))))
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x = self.pool(F.relu(self.bn4(self.conv4(x))))
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# Flatten
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x = x.view(-1, 512 * 8 * 8)
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# Fully connected layers
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x = F.relu(self.fc1(x))
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x = self.dropout(x)
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x = F.relu(self.fc2(x))
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x = self.dropout(x)
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x = self.fc3(x)
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return x
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src/optimizers/dynamic_nesterov.py
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import torch
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from torch.optim import Optimizer
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class DynamicNesterov(Optimizer):
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"""
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Dynamic Nesterov Accelerated Gradient optimizer
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with adaptive momentum estimation.
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"""
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def __init__(self, params, lr=1e-3, beta_max=0.9, epsilon=1e-8):
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defaults = dict(lr=lr, beta_max=beta_max, epsilon=epsilon)
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super(DynamicNesterov, self).__init__(params, defaults)
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def _estimate_spectral_norm(self, grad_norm):
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"""
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Simplified approximation of Hessian spectral norm.
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"""
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return grad_norm * 0.1
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def step(self, closure=None):
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"""Performs a single optimization step."""
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loss = None
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if closure is not None:
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loss = closure()
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for group in self.param_groups:
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lr = group['lr']
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beta_max = group['beta_max']
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epsilon = group['epsilon']
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for p in group['params']:
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if p.grad is None:
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continue
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grad = p.grad.data
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# Initialize state
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state = self.state[p]
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if len(state) == 0:
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state['momentum_buffer'] = torch.zeros_like(p.data)
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state['prev_grad'] = torch.zeros_like(p.data)
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momentum_buffer = state['momentum_buffer']
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prev_grad = state['prev_grad']
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# Compute gradient norm
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grad_norm = torch.norm(grad)
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# Estimate spectral norm
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spectral_norm = self._estimate_spectral_norm(grad_norm)
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# Dynamic momentum coefficient
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beta = min(beta_max, spectral_norm / (grad_norm + epsilon))
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# Nesterov update
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momentum_buffer.mul_(beta).add_(grad, alpha=-lr)
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p.data.add_(momentum_buffer, alpha=beta)
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p.data.add_(grad, alpha=-lr)
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# Save previous gradient
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prev_grad.copy_(grad)
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return loss
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