Commit History

comment
3a66f46

tonigi commited on

fixup
58795a2

tonigi commited on

introduce the full daylight expl list
b9da99b

tonigi commited on

add parser for pseudo-html to extract SMARTS rules into a DataFrame
228232d

tonigi commited on

parse instr
0b4156e

tonigi commited on

cleanup examples
97a5efe

tonigi commited on

ruff
024b09d

tonigi commited on

minor cleanup
11b47b0

tonigi commited on

buggy variable-ph sliders
04792f7

tonigi commited on

feat: update SDK version to 5.19.0 and enhance README with protonation mode details
489e1f0

tonigi commited on

now a submodule
a028ffc

tonigi commited on

feat: add protonation functionality at pH 7 and update example modes in the app
bcb006a

tonigi commited on

feat: update gr.Examples component with new examples for hybridization and Gasteiger charges
a1fa8ab

tonigi commited on

feat: include explicit hydrogens in Gasteiger charges computation and update display legend
eb0e467

tonigi commited on

feat: add Gasteiger charges computation and display functionality
16292cd

tonigi commited on

refactor: remove rotatable bond functions and patterns from app.py, consolidating logic in rotatable_bonds.py
f8ef849

tonigi commited on

feat: add detailed docstrings for rotatable bond functions and utility methods
bb74bbc

tonigi commited on

refactor: move SVG-related functions to utils.py and rotatable bond logic to rotatable_bonds.py
75e50a2

tonigi commited on

cleanup code
9d5e1c4

tonigi commited on

feat: enhance potential stereo processing and update labeling in SVG output
b09c173

tonigi commited on

feat: add hybridization state processing and update atom labeling in SVG output
62c669b

tonigi commited on

feat: add atom labeling support in SVG output for chiral centers
1145e9c

tonigi commited on

be clear if invalid smiles
cc1bd46

tonigi commited on

refactor: reduce default image size for SVG output
88cefd6

tonigi commited on

feat: add SVG output support for molecular drawings
dbcbc72

tonigi commited on

Another rotatable definition
5c160ff

tonigi commited on

refactor: move interligand moieties and YAML loading functions to file_helpers module
778426e

tonigi commited on

refactor: streamline functional group and SMARTS processing functions
3f0a4ce

tonigi commited on

reformat
a3276cd

tonigi commited on

hl bonds
55adf68

tonigi commited on

highlight scaffold
1816a7a

tonigi commited on

add potential stereo detection
1ae998d

tonigi commited on

readme
41d1e23

tonigi commited on

txt
b9c30ae

tonigi commited on

parse DAYLIGHT yaml
a03ef4f

tonigi commited on

move to data dir
a12e7b4

tonigi commited on

add another rotatable defn.
6d7b849

tonigi commited on

gitignore
e3dddaf

tonigi commited on

fix suramin, add captions
97f6979

tonigi commited on

rm emoji
18661a3

tonigi commited on

more examples
feb6c09

tonigi commited on

add examples
ad2d737

tonigi commited on

add readme
a5f3296

tonigi commited on

import old files
252653a

tonigi commited on

show chiral centers
ed78fca

tonigi commited on

author and title
a9f8bc3

tonigi commited on

img size
36737ab

tonigi commited on

add chiral centers and refactor
bba987f

tonigi commited on

interligand moieities
abb93c3

tonigi commited on

fix csv
331bb31

tonigi commited on