Spaces:
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Update pipeline_with_agents.py
Browse files- pipeline_with_agents.py +106 -39
pipeline_with_agents.py
CHANGED
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@@ -1,17 +1,12 @@
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# (This file is verbatim copy of the pipeline you provided β unchanged.)
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# Save exactly as provided by you.
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# -------------------------
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# Paste the full content you provided earlier here.
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# -------------------------
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"""
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Automated Data-Analysis Pipeline with Agent Prompts + Gemini (google-genai)
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"""
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import os
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@@ -34,25 +29,60 @@ logging.basicConfig(level=logging.INFO)
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logger = logging.getLogger("pipeline")
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# ---------------------------
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# Agent system prompts
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# ---------------------------
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PROMPTS = {
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"file_ingestion":
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}
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# ---------------------------
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@@ -73,13 +103,24 @@ DISALLOWED_PATTERNS = [
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r"\bsystem\s*\(",
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r"\bPopen\b",
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r"\bsh\b",
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]
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def code_is_safe(code: str) -> Tuple[bool, Optional[str]]:
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lowered = code
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for pat in DISALLOWED_PATTERNS:
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if re.search(pat, lowered):
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return False, f"disallowed pattern: {pat}"
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return True, None
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@@ -203,8 +244,9 @@ def gemini_generate_json(model: str, system_instruction: str, user_content: str,
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"""
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Calls genai generate_content_stream with given system prompt and user content.
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Expects the model to return JSON text. Joins chunks and returns parsed JSON or raw text.
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"""
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api_key = "
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if not api_key:
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raise EnvironmentError("GEMINI_API_KEY not set in environment.")
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client = genai.Client(api_key=api_key)
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@@ -503,12 +545,38 @@ def process_file(path: str, sheet: Optional[str] = None, model: str = "gemini-2.
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# If model didn't produce tasks array, use classification tasks
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tasks = classification_output.get("tasks", [])
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# Ensure at least 6 tasks
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tasks = ensure_six_tasks(tasks, pre_df)
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# Execute tasks
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final = {"pie": [], "bar": [], "line": [], "scatter": [], "histogram": [], "boxplot": []}
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execution_errors = []
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for idx, task in enumerate(tasks):
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chart_type = task.get("chart_type")
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if code_snippet:
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safe, reason = code_is_safe(code_snippet)
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if not safe:
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logger.warning("Rejected unsafe code snippet: %s", reason)
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else:
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# Controlled globals for exec/eval
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allowed_globals = {
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"np": np,
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"df": pre_df.copy(),
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}
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local_vars = {}
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try:
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# 1) Try exec (model should assign `result`)
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exec(code_snippet, allowed_globals, local_vars)
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# 3) Normalize result into list-of-dicts
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result_json = None
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if isinstance(result, pd.DataFrame):
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result_json = [
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elif isinstance(result, list):
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norm = []
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valid = True
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for r in result:
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if isinstance(r, dict):
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norm.append({k: to_json_serializable(v) for k,v in r.items()})
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else:
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# allow primitive lists but wrap as dict with value key
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norm.append(to_json_serializable(r))
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result_json = norm
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elif isinstance(result, dict):
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result_json = [{k: to_json_serializable(v) for k,v in result.items()}]
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else:
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# primitive or None -> invalid for chart payload
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result_json = None
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final.setdefault(chart_type, []).extend(normalized)
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executed = True
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if not executed:
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execution_errors.append({"task_index": idx, "reason": "result not list-of-dicts or missing", "code": code_snippet})
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except Exception as e:
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logger.exception("Model code execution failed for task %s: %s", idx, str(e))
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execution_errors.append({"task_index": idx, "reason": "exception during exec/eval", "exception": str(e), "code": code_snippet})
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"""
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Automated Data-Analysis Pipeline with Agent Prompts + Gemini (google-genai)
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Changes applied:
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- Use GEMINI_API_KEY from environment (no hardcoded key)
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- Stronger, model-proof PROMPTS that forbid plotting and require `result` assignment
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- Extended DISALLOWED_PATTERNS to block plotting libraries and plotting methods
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- Validation step after planning: drop model-provided code that lacks `result` or uses plotting tokens; record execution_errors
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- Execution still performs safety checks and falls back to deterministic generators when needed
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"""
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import os
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logger = logging.getLogger("pipeline")
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# ---------------------------
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# Agent system prompts (strict, plotting banned)
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# ---------------------------
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PROMPTS = {
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"file_ingestion": (
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"You are a file ingestion agent. Detect file type; if Excel enumerate sheets and pick the specified sheet or default to the first. "
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"Load the chosen sheet into a pandas DataFrame and return only metadata (no narrative): "
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'{"file_type":"<.csv|.xlsx|...>", "sheet_names":[...], "selected_sheet":"..."}'
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),
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"preprocessing": (
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"You are a preprocessing agent. Clean and normalize the dataset deterministically. "
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"Operations allowed: trim strings, coerce numeric columns with pandas.to_numeric, fill numeric NaNs with median, fill object NaNs with mode, "
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"generate one-line schema summary. RETURN JSON only: {\"actions\": [...], \"schema\": {\"columns\":[{\"name\":\"...\",\"dtype\":\"...\",\"n_unique\":N},...], \"n_rows\":N}}. "
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"Do NOT print or return any code, diagrams, or explanations."
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),
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"sampling": (
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"You are a sampling agent. From the cleaned dataframe produce three JSON arrays: head(5), tail(5), random(5). "
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"Return JSON: {\"head\": [...], \"tail\": [...], \"random\": [...]} where each array contains row dicts. Do NOT include extra fields."
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),
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"classification": (
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"You are a classification agent. Examine provided samples and schema. Identify dataset domain (one-word) and propose at least SIX visualization tasks. "
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"Each task must be a JSON object: {\"task_id\":\"tN\",\"chart_type\":\"pie|bar|line|scatter|histogram|boxplot\",\"target_columns\":[...],"
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"\"aggregation\": null|\"count\"|\"sum\"|\"mean\",\"reasoning\":\"one-sentence\"}. "
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"Return JSON exactly: {\"domain\":\"...\",\"tasks\":[...]} and nothing else. Do NOT include code. Do NOT recommend plotting libraries."
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),
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"planning": (
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"You are a planning agent. Input: the classification JSON + schema + small samples. Produce at least SIX task entries. "
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"For each task output a Python/pandas code snippet that uses ONLY pandas and numpy (and the dataframe variable `df`) and assigns the final result to a variable named `result`. "
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"REQUIREMENTS for the code string: "
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" - Must NOT import or reference matplotlib, seaborn, plotly, altair, bokeh, or any plotting functions. "
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" - Must NOT call pandas plotting methods (e.g. .plot(), .hist() wrapper that uses matplotlib). "
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" - Must NOT use eval/exec/compile or open(). "
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" - Allowed names: df, pd, np, len, sum, min, max, round, sorted. "
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" - The code must produce `result` as a list of dictionaries ready for JSON serialization (use .to_dict(orient='records') or list comprehension). "
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" - Return JSON exactly: {\"tasks\":[ {\"task_id\":\"t1\",\"chart_type\":\"pie\",\"target_columns\":[\"colA\"],"
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"\"aggregation\":\"count\",\"reasoning\":\"...\",\"code\":\"result = df.groupby('colA').size().reset_index(name=\\'value\\').to_dict(orient=\\'records\\')\" }, ... ] }"
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),
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"execution": (
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"You are an execution agent. You will run model-provided code in a restricted execution environment WITHOUT plotting libraries. "
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"The executor expects the code to assign a variable named `result` containing a list of dicts. "
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"Rules: do not rely on plotting functions. Use pandas/numpy for aggregation and numeric work only. "
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"Schema expectations per chart type (examples only): "
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" Pie β [{\"name\":\"...\",\"value\":number}], "
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" Bar β [{\"label\":\"...\",\"metric1\":number, ...}], "
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" Line β [{\"x\":...,\"y\":...}] (x may be ISO string), "
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" Scatter β [{\"x\":number,\"y\":number}], "
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" Histogram β [{\"bin\":\"start-end\",\"count\":number}], "
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" Boxplot β [{\"category\":\"...\",\"q1\":number,\"median\":number,\"q3\":number}]. "
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"Return nothing else; the pipeline will read `result` after execution. If you must provide example code show it only as a code string and follow the allowed-names rule."
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),
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"output": (
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"You are an output agent. Aggregate final chart JSON objects into a single JSON object with keys: "
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'"pie","bar","line","scatter","histogram","boxplot". Each key maps to an array (may be empty). Output JSON only.'
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)
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}
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# ---------------------------
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r"\bsystem\s*\(",
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r"\bPopen\b",
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r"\bsh\b",
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# plotting libraries / functions
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r"\bmatplotlib\b",
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r"\bseaborn\b",
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r"\bplotly\b",
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r"\baltair\b",
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r"\bbokeh\b",
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r"\.plot\s*\(",
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r"\.hist\s*\(",
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r"\.boxplot\s*\(",
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r"\bpyplot\b",
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r"\bplt\b",
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]
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def code_is_safe(code: str) -> Tuple[bool, Optional[str]]:
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lowered = code
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for pat in DISALLOWED_PATTERNS:
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if re.search(pat, lowered, flags=re.I):
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return False, f"disallowed pattern: {pat}"
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return True, None
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"""
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Calls genai generate_content_stream with given system prompt and user content.
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Expects the model to return JSON text. Joins chunks and returns parsed JSON or raw text.
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Uses GEMINI_API_KEY from environment.
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"""
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api_key = os.environ.get("GEMINI_API_KEY")
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if not api_key:
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raise EnvironmentError("GEMINI_API_KEY not set in environment.")
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client = genai.Client(api_key=api_key)
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# If model didn't produce tasks array, use classification tasks
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tasks = classification_output.get("tasks", [])
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# Execution errors list (populate during validation/execution)
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execution_errors: List[Dict[str, Any]] = []
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# Validate model-provided code before execution:
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# - require 'result' assignment inside code
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# - drop code that contains plotting tokens or disallowed patterns
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plotting_disallowed_re = re.compile(r"(matplotlib|seaborn|plotly|altair|bokeh|\.plot\s*\(|\.hist\s*\(|\.boxplot\s*\(|plt\b|pyplot\b)", flags=re.I)
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for i, t in enumerate(tasks):
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code = t.get("code", "") or ""
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if code:
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# 1) basic presence of `result`
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if "result" not in code:
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t.pop("code", None)
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execution_errors.append({"task_index": i, "task_id": t.get("task_id"), "reason": "missing 'result' assignment - code dropped"})
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continue
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# 2) plotting tokens check
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if plotting_disallowed_re.search(code):
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t.pop("code", None)
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execution_errors.append({"task_index": i, "task_id": t.get("task_id"), "reason": "plotting functions not allowed - code dropped"})
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continue
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# 3) disallowed patterns check
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safe, reason = code_is_safe(code)
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if not safe:
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t.pop("code", None)
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execution_errors.append({"task_index": i, "task_id": t.get("task_id"), "reason": f"disallowed pattern - code dropped: {reason}"})
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continue
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# Ensure at least 6 tasks
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tasks = ensure_six_tasks(tasks, pre_df)
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# Execute tasks
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final: Dict[str, List[Dict[str, Any]]] = {"pie": [], "bar": [], "line": [], "scatter": [], "histogram": [], "boxplot": []}
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for idx, task in enumerate(tasks):
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chart_type = task.get("chart_type")
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if code_snippet:
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safe, reason = code_is_safe(code_snippet)
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if not safe:
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logger.warning("Rejected unsafe code snippet at execution time: %s", reason)
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else:
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# Controlled globals for exec/eval
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allowed_globals = {
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"np": np,
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"df": pre_df.copy(),
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}
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local_vars: Dict[str, Any] = {}
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try:
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# 1) Try exec (model should assign `result`)
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exec(code_snippet, allowed_globals, local_vars)
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# 3) Normalize result into list-of-dicts
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result_json = None
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if isinstance(result, pd.DataFrame):
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result_json = [{k: to_json_serializable(v) for k, v in r.items()} for r in result.to_dict(orient="records")]
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elif isinstance(result, list):
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norm = []
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for r in result:
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if isinstance(r, dict):
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norm.append({k: to_json_serializable(v) for k, v in r.items()})
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else:
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# allow primitive lists but wrap as dict with value key
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norm.append({"value": to_json_serializable(r)})
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result_json = norm
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elif isinstance(result, dict):
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result_json = [{k: to_json_serializable(v) for k, v in result.items()}]
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else:
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# primitive or None -> invalid for chart payload
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result_json = None
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final.setdefault(chart_type, []).extend(normalized)
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executed = True
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if not executed:
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execution_errors.append({"task_index": idx, "reason": "result not list-of-dicts or missing after exec", "code": code_snippet})
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except Exception as e:
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logger.exception("Model code execution failed for task %s: %s", idx, str(e))
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execution_errors.append({"task_index": idx, "reason": "exception during exec/eval", "exception": str(e), "code": code_snippet})
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