aatu18 commited on
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c6a0fb1
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1 Parent(s): 0cfcfaf

no ssms, set to 0 counts, for melanoma type queries

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Files changed (1) hide show
  1. methods/utilities.py +6 -0
methods/utilities.py CHANGED
@@ -102,6 +102,12 @@ def calculate_ssm_frequency(ssm_statistics, cancer_entities, project_mappings):
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  / ssm_statistics[project]["total_case_counts"]
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  )
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  ssm_frequency[project] = {"frequency": round(freq * 100, 2)}
 
 
 
 
 
 
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  return ssm_frequency
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  / ssm_statistics[project]["total_case_counts"]
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  )
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  ssm_frequency[project] = {"frequency": round(freq * 100, 2)}
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+
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+ # if there are no ssms, set to 0 counts
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+ for c in cancer_entities:
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+ if c not in ssm_frequency:
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+ ssm_frequency[c] = {'frequency': 0.0}
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+
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  return ssm_frequency
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