"""YAML-BERT missing-field suggester — Gradio demo. Paste a Kubernetes YAML manifest; the model identifies fields it expects to see but that are absent. Runs the YAML-BERT checkpoint trained on full 276K K8s corpus — atomic-vocab prediction conditioned on doc_vec, with tree-aware bottom-up aggregation. Run locally: pip install gradio PYTHONPATH=. python app.py """ from __future__ import annotations import os import sys import time # Progress logging — every step on its own line with elapsed wall time, so # the HF Space build log shows continuous progress instead of long silent gaps. _T0 = time.time() def _log(msg: str) -> None: print(f"[{time.time() - _T0:6.2f}s] {msg}", file=sys.stderr, flush=True) _log("Starting app...") _log("Importing torch (takes a few seconds)...") import torch _log(f"torch {torch.__version__} imported") _log("Importing gradio...") import gradio as gr _log(f"gradio {gr.__version__} imported") _log("Importing yaml_bert package...") from yaml_bert.config import YamlBertConfig from yaml_bert.embedding import YamlBertEmbedding from yaml_bert.model import YamlBertModel from yaml_bert.suggest import suggest_missing_fields from yaml_bert.vocab import Vocabulary _log("yaml_bert imported") # ----- Model loading (once at startup) ----- DEFAULT_CHECKPOINT = "model/yaml_bert.pt" DEFAULT_VOCAB = "model/vocab.json" def load_model(checkpoint_path: str, vocab_path: str) -> tuple[YamlBertModel, Vocabulary]: _log(f"Loading vocab from {vocab_path}") vocab = Vocabulary.load(vocab_path) _log(f"Vocab loaded: subword={vocab.subword_vocab_size}, " f"atomic targets={vocab.atomic_target_vocab_size}") _log(f"Reading checkpoint file {checkpoint_path}") cp = torch.load(checkpoint_path, map_location="cpu", weights_only=False) _log("Building YamlBertModel architecture (v9: subword embedding)") # recon_enabled=True keeps the checkpoint's recon_head weights loadable. # The recon head exists but is never invoked at inference time # (no subtree_roots_flat passed in forward). config = YamlBertConfig(recon_enabled=True) emb = YamlBertEmbedding( config=config, subword_vocab_size=vocab.subword_vocab_size, ) model = YamlBertModel( config=config, embedding=emb, atomic_vocab_size=vocab.atomic_target_vocab_size, ) _log("Model architecture ready") _log("Loading state dict into model") model.load_state_dict(cp["model_state_dict"]) model.eval() _log("State dict loaded; model in eval mode") return model, vocab checkpoint_path = os.environ.get("YAML_BERT_CHECKPOINT", DEFAULT_CHECKPOINT) vocab_path = os.environ.get("YAML_BERT_VOCAB", DEFAULT_VOCAB) MODEL, VOCAB = load_model(checkpoint_path, vocab_path) n_params = sum(p.numel() for p in MODEL.parameters()) _log(f"Model fully loaded — {n_params:,} parameters") # ----- Inference ----- import re import yaml MAX_LINES_PER_DOC = 300 _DOC_SEP_RE = re.compile(r"^---\s*$", re.MULTILINE) def _label_for_example(yaml_text: str) -> str: """Compact label for an example YAML. - Single-doc: 'Kind: name' (with '(namespace)' suffix if metadata.namespace is set) - Multi-doc: 'MultiDoc' """ try: docs = [d for d in yaml.safe_load_all(yaml_text) if isinstance(d, dict)] except Exception: return "(unparseable)" if len(docs) > 1: return "MultiDoc" if not docs: return "(unidentified)" d = docs[0] kind = d.get("kind", "(no kind)") meta = d.get("metadata") if isinstance(d.get("metadata"), dict) else {} name = meta.get("name") namespace = meta.get("namespace") label = f"{kind}: {name}" if name else str(kind) if namespace: label += f" ({namespace})" return label def _split_yaml_documents(text: str) -> list[str]: """Split a multi-document YAML on '---' separator lines. Preserves original formatting (no parse-and-reserialize). Filters out empty / whitespace-only chunks and comment-only chunks. """ parts = _DOC_SEP_RE.split(text) out: list[str] = [] for p in parts: p = p.strip() if not p: continue # Skip chunks that are nothing but comments if all(line.strip().startswith("#") or not line.strip() for line in p.splitlines()): continue out.append(p) return out def _format_suggestions(suggestions: list[dict]) -> str: """Render the suggestions list as a grouped markdown table.""" by_parent: dict[str, list[dict]] = {} for s in suggestions: by_parent.setdefault(s.get("parent_path") or "(root)", []).append(s) blocks: list[str] = [] for parent in sorted(by_parent.keys(), key=lambda p: -max(s["confidence"] for s in by_parent[p])): rows = ["| Missing key | Confidence | Strength |", "|---|---:|---|"] for s in sorted(by_parent[parent], key=lambda x: -x["confidence"]): conf = s["confidence"] strength = "**STRONG**" if conf >= 0.7 else ("MODERATE" if conf >= 0.5 else "weak") rows.append(f"| `{s['missing_key']}` | {conf:.1%} | {strength} |") blocks.append(f"#### `{parent}`\n" + "\n".join(rows)) return "\n\n".join(blocks) def _detect_kind(yaml_text: str) -> str: """Best-effort 'kind:' extraction from raw YAML text (for the header label).""" m = re.search(r"^kind:\s*(\S+)", yaml_text, re.MULTILINE) return m.group(1) if m else "?" def _suggest_one(yaml_text: str, threshold: float) -> str: n_lines = len(yaml_text.splitlines()) if n_lines > MAX_LINES_PER_DOC: return ( f"⚠️ **Document too large** — {n_lines} lines (limit: {MAX_LINES_PER_DOC}).\n\n" f"The model was trained on manifests up to ~512 linearized nodes. Large " f"manifests (cluster-dumped Pods with rich annotations / init containers, deep CRDs) " f"exceed that and inference becomes slow and unreliable.\n\n" f"Trim verbose sections (annotations, env vars, deep probes) or split the manifest." ) try: suggestions, _skipped = suggest_missing_fields( MODEL, VOCAB, yaml_text, threshold=threshold, ) except Exception as e: return f"**Parse error:**\n```\n{e}\n```" if not suggestions: return ("_No suggestions above threshold — the model thinks this is " "either complete or has no strong opinions._") return _format_suggestions(suggestions) def suggest(yaml_text: str, threshold: float) -> str: yaml_text = (yaml_text or "").strip() if not yaml_text: return "_Paste a YAML manifest above to see missing-field suggestions._" docs = _split_yaml_documents(yaml_text) if not docs: return "_No YAML documents found in the input._" # Single doc: skip the document header for cleaner output if len(docs) == 1: return _suggest_one(docs[0], threshold) # Multi-doc: prefix each doc's output with a kind/index header blocks: list[str] = [] for i, doc_text in enumerate(docs, 1): kind = _detect_kind(doc_text) header = f"### Document {i}: `{kind}`" blocks.append(header + "\n\n" + _suggest_one(doc_text, threshold)) return "\n\n---\n\n".join(blocks) # ----- Manifest galaxy (precomputed UMAP of YAML-BERT doc_vecs) ----- GALAXY_DATA_PATH = "galaxy_data.json" # Qualitative palette (Plotly D3-style category20 + 5 more) so we can color # up to 25 distinct kinds before falling back to "Other". The corpus has # 49 distinct kinds total; the long tail under ~25 is rare enough that # graying them together is fine. _GALAXY_PALETTE = [ "#1f77b4", "#ff7f0e", "#2ca02c", "#d62728", "#9467bd", "#8c564b", "#e377c2", "#7f7f7f", "#bcbd22", "#17becf", "#aec7e8", "#ffbb78", "#98df8a", "#ff9896", "#c5b0d5", "#c49c94", "#f7b6d2", "#c7c7c7", "#dbdb8d", "#9edae5", "#393b79", "#637939", "#8c6d31", "#843c39", "#7b4173", ] _GALAXY_OTHER_COLOR = "#d0d0d0" _GALAXY_TOP_N = 25 def _build_galaxy_figure(data_path: str): """Build a Plotly scatter from the precomputed galaxy_data.json.""" import json from collections import Counter import plotly.graph_objects as go with open(data_path) as f: data = json.load(f) kinds = data["kind"] top_kinds = [k for k, _ in Counter(kinds).most_common(_GALAXY_TOP_N)] top_set = set(top_kinds) color_map = {k: _GALAXY_PALETTE[i % len(_GALAXY_PALETTE)] for i, k in enumerate(top_kinds)} fig = go.Figure() # "Other" first so the named kinds render on top series: list[tuple[str, str, list[int]]] = [] other_idxs = [i for i, k in enumerate(kinds) if k not in top_set] if other_idxs: series.append(("Other", _GALAXY_OTHER_COLOR, other_idxs)) for k in top_kinds: series.append((k, color_map[k], [i for i, kk in enumerate(kinds) if kk == k])) def _hover(i: int) -> str: parts = [f"{kinds[i]}", data["name"][i]] ns = data["namespace"][i] # "(default)" is the build-time placeholder when the manifest didn't # specify a namespace — true for all cluster-scoped kinds (Namespace, # ClusterRole, CRD, …) and for namespaced resources that omit it. # Showing "ns: (default)" for these is misleading, so suppress. if ns and ns != "(default)": parts.append(f"ns: {ns}") return "
".join(parts) for label, color, idxs in series: if not idxs: continue fig.add_scattergl( x=[data["x"][i] for i in idxs], y=[data["y"][i] for i in idxs], mode="markers", name=f"{label} ({len(idxs):,})", marker=dict(size=4, color=color, opacity=0.65), text=[_hover(i) for i in idxs], hovertemplate="%{text}", ) fig.update_layout( title=(f"UMAP projection of {data['n']:,} K8s manifests " f"(cosine metric)"), xaxis=dict(visible=False), yaxis=dict(visible=False, scaleanchor="x"), height=720, margin=dict(l=10, r=10, t=60, b=10), legend=dict(orientation="v", x=1.0, y=1.0, font=dict(size=10)), plot_bgcolor="white", ) return fig _log("Building manifest galaxy figure...") try: GALAXY_FIG = _build_galaxy_figure(GALAXY_DATA_PATH) _log("Galaxy figure built") except FileNotFoundError: GALAXY_FIG = None _log(f"Galaxy data not found at {GALAXY_DATA_PATH} — galaxy tab will be empty") # ----- Structural probes ----- # # Presets of hand-crafted manifests that probe whether the model encodes # specific structural distinctions. Each preset's manifests are encoded to # doc_vecs, projected to 2D via MDS (preserves pairwise cosine distances), # and shown as a scatter plot. Users can add their own YAMLs to see where # they land relative to the preset. # ---- Preset manifests ---- _POD_NGINX = """apiVersion: v1 kind: Pod metadata: name: nginx-app spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _POD_REDIS = """apiVersion: v1 kind: Pod metadata: name: redis-app spec: containers: - name: app image: redis ports: - containerPort: 6379 """ _POD_NGINX_INIT = """apiVersion: v1 kind: Pod metadata: name: nginx-with-init spec: initContainers: - name: setup image: busybox command: ["sh", "-c", "echo init"] containers: - name: app image: nginx ports: - containerPort: 80 """ _POD_REDIS_INIT = """apiVersion: v1 kind: Pod metadata: name: redis-with-init spec: initContainers: - name: setup image: busybox command: ["sh", "-c", "echo init"] containers: - name: app image: redis ports: - containerPort: 6379 """ _SVC_CLUSTERIP_WEB = """apiVersion: v1 kind: Service metadata: name: web-clusterip spec: type: ClusterIP selector: app: web ports: - port: 80 targetPort: 8080 """ _SVC_CLUSTERIP_API = """apiVersion: v1 kind: Service metadata: name: api-clusterip spec: type: ClusterIP selector: app: api ports: - port: 443 targetPort: 8443 """ _SVC_NODEPORT = """apiVersion: v1 kind: Service metadata: name: web-nodeport spec: type: NodePort selector: app: web ports: - port: 80 targetPort: 8080 nodePort: 30080 """ _SVC_LOADBALANCER = """apiVersion: v1 kind: Service metadata: name: web-lb spec: type: LoadBalancer selector: app: web externalTrafficPolicy: Local ports: - port: 80 targetPort: 8080 """ _DEPLOY_NGINX = """apiVersion: apps/v1 kind: Deployment metadata: name: nginx spec: replicas: 3 selector: matchLabels: app: nginx template: metadata: labels: app: nginx spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _CONFIGMAP_APP = """apiVersion: v1 kind: ConfigMap metadata: name: app-config data: config.yaml: | debug: true app.properties: | key1=value1 """ _POD_NS_PROD_1 = """apiVersion: v1 kind: Pod metadata: name: web-1 namespace: production spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _POD_NS_PROD_2 = """apiVersion: v1 kind: Pod metadata: name: web-2 namespace: production spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _POD_NS_STAGING_1 = """apiVersion: v1 kind: Pod metadata: name: web-1 namespace: staging spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _POD_NS_STAGING_2 = """apiVersion: v1 kind: Pod metadata: name: web-2 namespace: staging spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _DEPLOY_APPS_V1 = """apiVersion: apps/v1 kind: Deployment metadata: name: web spec: replicas: 3 selector: matchLabels: app: web template: metadata: labels: app: web spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _DEPLOY_EXT_V1BETA1 = """apiVersion: extensions/v1beta1 kind: Deployment metadata: name: web spec: replicas: 3 selector: matchLabels: app: web template: metadata: labels: app: web spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _REPLICASET_APPS_V1 = """apiVersion: apps/v1 kind: ReplicaSet metadata: name: web spec: replicas: 3 selector: matchLabels: app: web template: metadata: labels: app: web spec: containers: - name: app image: nginx ports: - containerPort: 80 """ _CONFIGMAP_PLAIN = """apiVersion: v1 kind: ConfigMap metadata: name: web data: config.yaml: | debug: true app.properties: | key=value """ def _verdict_init(cos): cd = float(cos[2][3]) mx = float(max(cos[0][2], cos[1][3])) passed = cd > mx msg = ( f"`cos(C, D)` = **{cd:.3f}** (both have init) · " f"`max(cos(A,C), cos(B,D))` = **{mx:.3f}** (mixed). " + ("Init-pairs cluster tighter than mixed pairs — the model treats " "`initContainers` as a real structural feature, stronger than the " "value-content similarity (shared `image: nginx` etc.)." if passed else "Mixed pairs are at least as close as init-pairs. This is not a " "regression — it reveals a re-balance: BPE makes `image` values " "compositionally visible to attention, so pods sharing `nginx` " "cluster together regardless of init presence. v8 with atomic " "`[UNK]` values had no choice but to lean on structure; v9 has " "both signals and now weights content more heavily here. " "Whether that's good depends on use case (good for content " "retrieval, less ideal for structure-only similarity).") ) return passed, msg def _verdict_service_type(cos): same = float(cos[0][1]) cross = float(max(cos[0][2], cos[0][3], cos[1][2], cos[1][3], cos[2][3])) passed = same > cross msg = ( f"`cos(A, B)` = **{same:.3f}** (both ClusterIP) · " f"`max(cross-type)` = **{cross:.3f}**. " + ("Same-type pairs cluster tighter than cross-type pairs — the " "model has internalized the `type` distinction (likely through " "the structural keys each type adds: `nodePort`, " "`externalTrafficPolicy`)." if passed else "Same-type pairs do not cluster more tightly than cross-type " "pairs — `type` is not a primary axis in the embedding here.") ) return passed, msg def _verdict_namespace(cos): # A, B in production · C, D in staging — all otherwise identical Pods. same_ns = float(min(cos[0][1], cos[2][3])) cross_ns = float(max(cos[0][2], cos[0][3], cos[1][2], cos[1][3])) passed = same_ns > cross_ns msg = ( f"`min(same-ns cos)` = **{same_ns:.3f}** · " f"`max(cross-ns cos)` = **{cross_ns:.3f}**. " + ("Same-namespace pairs cluster tighter — value content reaches " "`doc_vec` even though the aggregator only sums KEY subtrees. " "BPE makes namespace values compositional (e.g., `prod | uction`), " "and self-attention spreads that signal into neighboring KEY " "hidden states, which then flow into `doc_vec`. This was the " "first failure of `[UNK]`-vocab v8 that v9 fixed." if passed else "Same-namespace and cross-namespace pairs have indistinguishable " "cosines. v8 saw this because both `production` and `staging` " "often hit `[UNK]`. v9 was expected to pass — if it does not, " "investigate.") ) return passed, msg def _verdict_apiversion(cos): # A = apps/v1 Deployment # B = extensions/v1beta1 Deployment (same kind, deprecated apiVersion) # C = apps/v1 ReplicaSet (different kind, same group, similar structure) # D = v1 ConfigMap (unrelated) same_kind = float(cos[0][1]) same_group_diff_kind = float(cos[0][2]) unrelated = float(cos[0][3]) primary = same_kind > same_group_diff_kind secondary = same_group_diff_kind > unrelated passed = primary and secondary msg = ( f"`cos(apps/v1 Dep, ext/v1beta1 Dep)` = **{same_kind:.3f}** · " f"`cos(Dep, ReplicaSet)` = **{same_group_diff_kind:.3f}** · " f"`cos(Dep, ConfigMap)` = **{unrelated:.3f}**. " + ("Same-kind-different-apiVersion pairs cluster tightest, then " "same-group-different-kind, then unrelated. The model treats " "apiVersion as a soft label, not a hard discriminator — it " "recognizes `apps/v1` and `extensions/v1beta1` Deployments as " "the same thing despite the apiVersion text differing." if passed else f"Expected ordering broken: same-kind={same_kind:.3f}, " f"same-group={same_group_diff_kind:.3f}, unrelated={unrelated:.3f}. " "If same-kind is NOT the tightest, the model is treating " "apiVersion as a hard discriminator and separating same-kind " "manifests by their api label — possibly an over-correction " "from the eval-probe accuracy.") ) return passed, msg def _verdict_cross_kind(cos): # A=Pod nginx, B=Pod redis, C=Deployment with nginx Pod template, D=ConfigMap pod_pod = float(cos[0][1]) # both Pods pod_deploy = float(cos[0][2]) # Pod ↔ Deployment with same-shape Pod template pod_cm = float(cos[0][3]) # Pod ↔ unrelated kind deploy_cm = float(cos[2][3]) # Deployment ↔ unrelated kind passed = pod_deploy > max(pod_cm, deploy_cm) msg = ( f"`cos(Pod, Deployment-with-Pod-template)` = **{pod_deploy:.3f}** · " f"`cos(Pod, ConfigMap)` = **{pod_cm:.3f}** · " f"`cos(Pod, Pod)` = **{pod_pod:.3f}** (kind silo). " + ("Pod and the Deployment containing the same Pod template are " "closer than either is to an unrelated ConfigMap — the model " "encodes the shared Pod-shape across the two kinds." if passed else "The shared Pod-shape across the two kinds is not detected — " "kinds form sharp silos in the embedding.") ) return passed, msg PRESETS = [ { "id": "init", "title": "Pod ± initContainers", "hypothesis": ( "If the model treats `initContainers` as a structural feature, " "Pods that both have one should land closer in embedding space " "than mixed pairs. _Caveat: the init container in C and D is " "the same busybox setup, so `cos(C, D)` reflects both " "structural-key presence AND shared busybox content — this " "test is necessary but not sufficient for the structural " "claim. A follow-up varying the init-container content would " "isolate the two signals._" ), "manifests": [ {"name": "nginx (no init)", "yaml": _POD_NGINX}, {"name": "redis (no init)", "yaml": _POD_REDIS}, {"name": "nginx + init", "yaml": _POD_NGINX_INIT}, {"name": "redis + init", "yaml": _POD_REDIS_INIT}, ], "verdict_fn": _verdict_init, }, { "id": "service-type", "title": "Service type (ClusterIP / NodePort / LoadBalancer)", "hypothesis": ( "Each Service `type` brings its own structural keys " "(`nodePort`, `externalTrafficPolicy`, …). If the model " "encodes `type` as a structural axis, same-type Services " "should sit closer in embedding space than cross-type ones, " "even when their selectors and ports differ." ), "manifests": [ {"name": "ClusterIP — app=web", "yaml": _SVC_CLUSTERIP_WEB}, {"name": "ClusterIP — app=api", "yaml": _SVC_CLUSTERIP_API}, {"name": "NodePort — app=web", "yaml": _SVC_NODEPORT}, {"name": "LoadBalancer — app=web", "yaml": _SVC_LOADBALANCER}, ], "verdict_fn": _verdict_service_type, }, { "id": "namespace", "title": "Pods in same namespace vs different namespace", "hypothesis": ( "If the model encodes `metadata.namespace` as a feature, two " "Pods in the same namespace should be closer than two Pods in " "different namespaces (controlling for structure). " "_v8 with atomic vocab failed this probe — `production` and " "`staging` often mapped to `[UNK]`, leaving attention with no " "compositional content to work with. v9's byte-level BPE " "decomposes namespace values into subwords, and self-attention " "now spreads value content into surrounding KEY hidden states. " "Those KEYs are what the aggregator pools into `doc_vec` — so " "namespace effectively reaches `doc_vec` through the attention " "channel, even though the aggregator stays KEY-only by design._" ), "manifests": [ {"name": "production / web-1", "yaml": _POD_NS_PROD_1}, {"name": "production / web-2", "yaml": _POD_NS_PROD_2}, {"name": "staging / web-1", "yaml": _POD_NS_STAGING_1}, {"name": "staging / web-2", "yaml": _POD_NS_STAGING_2}, ], "verdict_fn": _verdict_namespace, }, { "id": "apiversion", "title": "apiVersion sensitivity (same kind, different apiVersion)", "hypothesis": ( "K8s supports multiple `apiVersion`s for the same kind " "(e.g., `apps/v1` Deployment and the deprecated " "`extensions/v1beta1` Deployment have nearly identical " "structure). If the model encodes kind as the dominant " "structural signal and `apiVersion` as a soft label, two " "same-kind manifests with different `apiVersion`s should " "still sit closer in embedding space than a same-group " "different-kind manifest (`apps/v1` ReplicaSet), which in " "turn should be closer than an unrelated kind " "(`v1` ConfigMap). _Eval probes already show 99.8% " "`apiVersion` classification accuracy — but classification " "is compatible with either treating `apiVersion` as a soft " "label or as a hard discriminator. This probe tests which._" ), "manifests": [ {"name": "apps/v1 Deployment", "yaml": _DEPLOY_APPS_V1}, {"name": "extensions/v1beta1 Deploy", "yaml": _DEPLOY_EXT_V1BETA1}, {"name": "apps/v1 ReplicaSet", "yaml": _REPLICASET_APPS_V1}, {"name": "v1 ConfigMap (unrelated)", "yaml": _CONFIGMAP_PLAIN}, ], "verdict_fn": _verdict_apiversion, }, { "id": "cross-kind", "title": "Pod vs Deployment containing the same Pod template", "hypothesis": ( "A Deployment's `spec.template` carries a Pod's shape — the " "same `spec.containers` substructure as a standalone Pod, " "just nested one level deeper. If the model encodes that " "shape similarity, a standalone Pod and a Deployment " "containing the same Pod template should sit closer in " "embedding space than either does to an unrelated kind like " "ConfigMap." ), "manifests": [ {"name": "Pod (nginx)", "yaml": _POD_NGINX}, {"name": "Pod (redis)", "yaml": _POD_REDIS}, {"name": "Deployment with nginx template", "yaml": _DEPLOY_NGINX}, {"name": "ConfigMap (unrelated)", "yaml": _CONFIGMAP_APP}, ], "verdict_fn": _verdict_cross_kind, }, ] # Letters & colors used for both plot points and accordion headers. _PRESET_PALETTE = [ "#1f77b4", # A blue "#ff7f0e", # B orange "#2ca02c", # C green "#d62728", # D red "#9467bd", # E purple "#8c564b", # F brown "#e377c2", # G pink "#17becf", # H cyan ] _PRESET_LETTERS = ["A", "B", "C", "D", "E", "F", "G", "H"] # Reuse one linearizer/annotator/config across calls (cheap, but skip the # per-call construction inside _encode_doc_vec). def _make_encoder_state(): from yaml_bert.annotator import DomainAnnotator from yaml_bert.config import YamlBertConfig from yaml_bert.linearizer import YamlLinearizer return YamlLinearizer(), DomainAnnotator(), YamlBertConfig( mask_prob=0.0, recon_enabled=False, ) _LINEARIZER, _ANNOTATOR, _INFER_CONFIG = _make_encoder_state() def _encode_doc_vec(yaml_text: str) -> torch.Tensor: """Encode one YAML doc and return its doc_vec (shape (d_model,)).""" from yaml_bert.dataset import YamlBertDataset, collate_fn as _collate nodes = _LINEARIZER.linearize(yaml_text) if not nodes: raise ValueError("YAML produced no nodes") _ANNOTATOR.annotate(nodes) ds = YamlBertDataset([nodes], VOCAB, _INFER_CONFIG) item = ds[0] batch = _collate([item]) with torch.no_grad(): out = MODEL( token_ids=batch["token_ids"], node_types=batch["node_types"], depths=batch["depths"], sibling_indices=batch["sibling_indices"], batch_info=batch["batch_info"], padding_mask=batch["padding_mask"], logical_ids=batch["logical_ids"], n_logical_per_doc=batch["n_logical_per_doc"], parent_of_tensor=batch["parent_of_tensor"], top_level_key_mask=batch["top_level_key_mask"], edges_by_depth=batch["edges_by_depth"], parents_by_depth=batch["parents_by_depth"], ) return out[1][0] # (d_model,) def _layout_2d(vecs): """Project doc_vecs to 2D coords via MDS on cosine distances.""" import numpy as np n = len(vecs) if n == 1: return np.array([[0.0, 0.0]]) if n == 2: return np.array([[-1.0, 0.0], [1.0, 0.0]]) if isinstance(vecs, list): vecs = torch.stack(vecs) vecs_norm = vecs / vecs.norm(dim=1, keepdim=True) cos = (vecs_norm @ vecs_norm.t()).numpy() dist = 1.0 - cos np.fill_diagonal(dist, 0.0) dist = np.clip(dist, 0.0, None) # sklearn MDS(metric="precomputed") requires strict symmetry; floating-point # matmul can leave ~1e-7 asymmetries. Symmetrize explicitly. dist = (dist + dist.T) / 2 from sklearn.manifold import MDS mds = MDS( n_components=2, metric="precomputed", random_state=42, normalized_stress="auto", init="classical_mds", ) return mds.fit_transform(dist) def _find_identical_groups(items, threshold: float = 0.9999): """Find groups of items whose pairwise cosine similarity is ~1.0. These represent inputs the model encodes to the same `doc_vec` (e.g. when their differing values all map to the same vocab token, typically [UNK]). The plot must show this honestly: they overlap. """ if len(items) < 2: return [] vecs = torch.stack([it["vec"] for it in items]) vecs_norm = vecs / vecs.norm(dim=1, keepdim=True) cos = (vecs_norm @ vecs_norm.t()).numpy() groups: list[list[int]] = [] assigned = [False] * len(items) for i in range(len(items)): if assigned[i]: continue group = [i] assigned[i] = True for j in range(i + 1, len(items)): if not assigned[j] and cos[i][j] >= threshold: group.append(j) assigned[j] = True if len(group) > 1: groups.append(group) return groups def _collision_note(items): """Markdown note when two or more items produce identical doc_vecs.""" groups = _find_identical_groups(items) if not groups: return "" lines = [] for g in groups: labels = ", ".join(f"`{items[i]['letter']}`" for i in g) lines.append( f"- {labels} encode to **identical** `doc_vec`s " f"(`cos ≈ 1.0`). The plot will show them overlapping — that " f"is honest: the model cannot tell these inputs apart. " f"Likely cause: differing values all collapse to the same " f"vocab token (often `[UNK]` when names aren't frequent " f"enough in the training corpus to earn a vocab slot)." ) return "\n\n**Identical embeddings detected:**\n" + "\n".join(lines) def _build_preset_figure(items, hypothesis=""): """Build a Plotly scatter from a list of {letter, name, vec, ...} items.""" import plotly.graph_objects as go if not items: return go.Figure() vecs = [it["vec"] for it in items] coords = _layout_2d(vecs) colors = [_PRESET_PALETTE[i % len(_PRESET_PALETTE)] for i in range(len(items))] letters = [it["letter"] for it in items] names = [it["name"] for it in items] fig = go.Figure() fig.add_scatter( x=coords[:, 0], y=coords[:, 1], mode="markers+text", text=letters, textposition="top center", textfont=dict(size=14, color="#222"), marker=dict(size=18, color=colors, opacity=0.85, line=dict(width=2, color="#222")), hovertext=[f"{l} — {n}" for l, n in zip(letters, names)], hovertemplate="%{hovertext}", showlegend=False, ) fig.update_layout( title="2D layout (MDS of cosine distances) — closer = more similar", height=460, margin=dict(l=10, r=10, t=50, b=10), xaxis=dict(visible=False), yaxis=dict(visible=False, scaleanchor="x"), plot_bgcolor="white", ) return fig def _encode_preset(preset): """Encode all manifests in a preset; return list of items with vecs.""" items = [] for i, m in enumerate(preset["manifests"]): vec = _encode_doc_vec(m["yaml"]) items.append({ "letter": _PRESET_LETTERS[i], "name": m["name"], "yaml": m["yaml"], "vec": vec, "preset_id": preset["id"], }) return items def _compute_cos_matrix(items): """Compute cosine matrix from items (for the verdict function).""" vecs = torch.stack([it["vec"] for it in items]) vecs_norm = vecs / vecs.norm(dim=1, keepdim=True) return (vecs_norm @ vecs_norm.t()).numpy() def _verdict_markdown(preset, items): """Run the preset's verdict function on the first N items (its presets).""" n_preset = len(preset["manifests"]) if len(items) < n_preset: return "_(not enough manifests for verdict)_" cos = _compute_cos_matrix(items[:n_preset]) passed, msg = preset["verdict_fn"](cos) emoji = "✅" if passed else "❌" main = f"**Verdict on preset:** {emoji}   {msg}" return main + _collision_note(items) _log("Encoding preset manifests...") PRESET_BY_ID = {p["id"]: p for p in PRESETS} PRESET_ITEMS_BY_ID = {p["id"]: _encode_preset(p) for p in PRESETS} for p in PRESETS: items = PRESET_ITEMS_BY_ID[p["id"]] cos = _compute_cos_matrix(items) passed, _ = p["verdict_fn"](cos) _log(f" '{p['title']}': {'PASS' if passed else 'FAIL'}") # ----- UI ----- EXAMPLE_NGINX = """apiVersion: apps/v1 kind: Deployment metadata: name: nginx-deployment spec: selector: matchLabels: app: nginx replicas: 2 template: metadata: labels: app: nginx spec: containers: - name: nginx image: nginx:1.8 resources: limits: memory: "128Mi" cpu: "250m" ports: - containerPort: 80 """ EXAMPLE_INCOMPLETE_SERVICE = """apiVersion: v1 kind: Service metadata: name: my-svc spec: selector: app: web """ EXAMPLE_CONFIGMAP = """apiVersion: v1 kind: ConfigMap metadata: name: app-config data: key1: value1 """ EXAMPLE_STATEFULSET = """apiVersion: apps/v1 kind: StatefulSet metadata: name: web spec: serviceName: nginx replicas: 3 selector: matchLabels: app: nginx template: metadata: labels: app: nginx spec: containers: - name: nginx image: nginx:1.21 ports: - containerPort: 80 name: web volumeMounts: - name: www mountPath: /usr/share/nginx/html volumeClaimTemplates: - metadata: name: www spec: accessModes: ["ReadWriteOnce"] resources: requests: storage: 1Gi """ EXAMPLE_CRONJOB = """apiVersion: batch/v1 kind: CronJob metadata: name: hello spec: schedule: "*/5 * * * *" jobTemplate: spec: template: spec: containers: - name: hello image: busybox:1.28 command: ["/bin/sh", "-c", "date; echo hello"] restartPolicy: OnFailure """ EXAMPLE_HPA = """apiVersion: autoscaling/v2 kind: HorizontalPodAutoscaler metadata: name: php-apache spec: scaleTargetRef: apiVersion: apps/v1 kind: Deployment name: php-apache minReplicas: 1 maxReplicas: 10 metrics: - type: Resource resource: name: cpu target: type: Utilization averageUtilization: 50 """ EXAMPLE_NETWORKPOLICY = """apiVersion: networking.k8s.io/v1 kind: NetworkPolicy metadata: name: db-policy spec: podSelector: matchLabels: app: db policyTypes: - Ingress - Egress ingress: - from: - podSelector: matchLabels: role: api ports: - protocol: TCP port: 5432 egress: - to: - namespaceSelector: matchLabels: name: kube-system """ EXAMPLE_INGRESS = """apiVersion: networking.k8s.io/v1 kind: Ingress metadata: name: site spec: rules: - host: example.com http: paths: - path: / pathType: Prefix backend: service: name: site-svc port: number: 80 """ EXAMPLE_POD_INIT_PROBES = """apiVersion: v1 kind: Pod metadata: name: app spec: initContainers: - name: init-db image: busybox command: ["sh", "-c", "until nc -z db 5432; do sleep 1; done"] containers: - name: app image: myapp:1.0 ports: - containerPort: 8080 livenessProbe: httpGet: path: /healthz port: 8080 initialDelaySeconds: 10 periodSeconds: 5 readinessProbe: httpGet: path: /ready port: 8080 """ EXAMPLE_SECRET = """apiVersion: v1 kind: Secret metadata: name: db-credentials type: Opaque stringData: username: admin password: changeme """ EXAMPLE_DEPLOYMENT_INCOMPLETE = """# A Deployment missing selector and replicas — model should suggest both apiVersion: apps/v1 kind: Deployment metadata: name: api spec: template: metadata: labels: app: api spec: containers: - name: api image: api:1.0 """ EXAMPLE_RBAC_MULTIDOC = """# ClusterRole / PSP / ClusterRoleBinding bundle # Source: kubernetes/examples staging/podsecuritypolicy/rbac/bindings.yaml apiVersion: rbac.authorization.k8s.io/v1 kind: ClusterRole metadata: name: restricted-psp-user rules: - apiGroups: - policy resources: - podsecuritypolicies resourceNames: - restricted verbs: - use --- apiVersion: policy/v1beta1 kind: PodSecurityPolicy metadata: name: restricted spec: privileged: false fsGroup: rule: RunAsAny runAsUser: rule: MustRunAsNonRoot seLinux: rule: RunAsAny supplementalGroups: rule: RunAsAny volumes: - 'emptyDir' - 'secret' - 'downwardAPI' - 'configMap' - 'persistentVolumeClaim' - 'projected' hostPID: false hostIPC: false hostNetwork: false --- apiVersion: rbac.authorization.k8s.io/v1 kind: ClusterRoleBinding metadata: name: restricted-psp-users subjects: - kind: Group apiGroup: rbac.authorization.k8s.io name: restricted-psp-users roleRef: apiGroup: rbac.authorization.k8s.io kind: ClusterRole name: restricted-psp-user """ _log("Building Gradio UI...") _TILE_CSS = """ .demo-tile { display: flex !important; flex-direction: column !important; height: 100%; } .demo-tile > .prose, .demo-tile > .markdown { flex: 1 1 auto; } .demo-tile > button { margin-top: auto !important; } """ with gr.Blocks(title="YAML-BERT") as demo: gr.Markdown( f""" # YAML-BERT — structural understanding of Kubernetes YAML Code: [github.com/vimalk78/yaml-bert](https://github.com/vimalk78/yaml-bert) · Trained with MLM + reconstruction on 276K K8s manifests · {n_params:,} params **This Space includes 3 demos — pick a tab below, or use the tiles on the Overview tab.** """ ) with gr.Tabs() as tabs: with gr.Tab("Overview", id="overview"): gr.Markdown("### Demos in this Space") with gr.Row(): with gr.Column(elem_classes="demo-tile"): gr.Markdown( "#### 🧩 Missing-field suggester\n" "Paste a YAML manifest; the model predicts which " "structural fields it expects but you didn't include, " "ranked by confidence." ) open_suggester = gr.Button( "Open missing-field suggester →", variant="primary" ) with gr.Column(elem_classes="demo-tile"): gr.Markdown( "#### 🌌 Manifest galaxy\n" "10,000 K8s manifests projected to 2D from their " "`doc_vec` embeddings. Kinds cluster spontaneously — " "the model was never told what `kind` is." ) open_galaxy = gr.Button( "Open manifest galaxy →", variant="primary" ) with gr.Column(elem_classes="demo-tile"): gr.Markdown( "#### 🔬 Structural probes\n" "Preset manifest sets that test whether the model " "has learned specific structural distinctions, " "shown as a 2D layout. Add your own YAML to see " "where it lands." ) open_probes = gr.Button( "Open structural probes →", variant="primary" ) with gr.Tab("Missing-field suggester", id="suggester"): gr.Markdown( "Paste a Kubernetes YAML manifest. The model walks each " "parent level, identifies fields it expects to see there " "but that are absent, and ranks the suggestions by confidence." ) with gr.Row(): with gr.Column(scale=1): yaml_input = gr.Code( language="yaml", lines=22, max_lines=100, label="YAML input", value=EXAMPLE_NGINX, ) threshold = gr.Slider( minimum=0.05, maximum=0.95, value=0.7, step=0.05, label="Confidence threshold", ) submit = gr.Button("Suggest missing fields", variant="primary") with gr.Column(scale=1): output = gr.Markdown(label="Suggestions", value="") submit.click(fn=suggest, inputs=[yaml_input, threshold], outputs=output) # No auto-trigger on yaml_input.change — typing/pasting a long YAML # would fire many inference requests and back up the queue. _ALL_EXAMPLES = [ EXAMPLE_NGINX, EXAMPLE_DEPLOYMENT_INCOMPLETE, EXAMPLE_INCOMPLETE_SERVICE, EXAMPLE_CONFIGMAP, EXAMPLE_SECRET, EXAMPLE_STATEFULSET, EXAMPLE_CRONJOB, EXAMPLE_HPA, EXAMPLE_NETWORKPOLICY, EXAMPLE_INGRESS, EXAMPLE_POD_INIT_PROBES, EXAMPLE_RBAC_MULTIDOC, ] gr.Examples( examples=[[y] for y in _ALL_EXAMPLES], example_labels=[_label_for_example(y) for y in _ALL_EXAMPLES], inputs=[yaml_input], examples_per_page=20, label="Example YAMLs", ) gr.Markdown( """ --- ### What it does well - Predicts standard Kubernetes structural fields - Distinguishes kind-specific fields (`Deployment.replicas` vs `Service.ports`) - Calibrated confidence: strong on common patterns, weaker in ambiguous positions ### Known limitations - Status-side fields are not well predicted - Novel CRD instances and rare annotation keys may not work - Trained on `substratusai/the-stack-yaml-k8s` """ ) with gr.Tab("Manifest galaxy", id="galaxy"): gr.Markdown( "Each point is one K8s manifest from the training corpus, " "embedded as a `doc_vec` by the bottom-up tree aggregator, " "then projected to 2D with UMAP (cosine metric). " "Manifests with similar structure end up near each other — " "the model has never been told what `kind` is, " "yet clusters of `Deployment`, `Service`, `ConfigMap` etc. " "form spontaneously." ) if GALAXY_FIG is not None: gr.Plot(value=GALAXY_FIG, show_label=False) else: gr.Markdown("_Galaxy data unavailable._") gr.Markdown( "Hover for `kind / name / namespace`. " "Top 15 kinds are colored; everything else is gray. " "Click a legend entry to toggle that kind on/off." ) with gr.Tab("Structural probes", id="probes"): gr.Markdown( "Pick a preset that explores a specific structural claim. " "The 2D plane is an MDS projection of the manifests' " "`doc_vecs` — **closer = more similar**. " "You can also paste your own YAML to see where it lands " "relative to the preset." ) _initial_preset = PRESETS[0] _initial_items = PRESET_ITEMS_BY_ID[_initial_preset["id"]] preset_dd = gr.Dropdown( choices=[(p["title"], p["id"]) for p in PRESETS], value=_initial_preset["id"], label="Preset", interactive=True, ) hypothesis_md = gr.Markdown( value=f"**Hypothesis:** {_initial_preset['hypothesis']}" ) items_state = gr.State(value=_initial_items) with gr.Row(): with gr.Column(scale=2): plot = gr.Plot( value=_build_preset_figure(_initial_items), show_label=False, ) verdict_md = gr.Markdown( value=_verdict_markdown(_initial_preset, _initial_items) ) with gr.Column(scale=1): gr.Markdown("**Manifests in this comparison**") @gr.render(inputs=[items_state]) def _render_accordions(items): if not items: gr.Markdown("_No manifests._") return preset_id = items[0].get("preset_id", "") n_preset = (len(PRESET_BY_ID[preset_id]["manifests"]) if preset_id in PRESET_BY_ID else 0) for i, it in enumerate(items): is_user = i >= n_preset label = f"[{it['letter']}] {it['name']}" if is_user: label += " · added" with gr.Accordion(label, open=False): gr.Code( value=it["yaml"], language="yaml", lines=12, interactive=False, ) if is_user: rm = gr.Button( f"Remove {it['letter']}", variant="secondary", ) def _remove(state, idx=i): new = state[:idx] + state[idx + 1:] preset = PRESET_BY_ID.get( new[0]["preset_id"]) if new else None verdict = (_verdict_markdown(preset, new) if preset else "") return (new, _build_preset_figure(new), verdict) rm.click( _remove, inputs=[items_state], outputs=[items_state, plot, verdict_md], ) gr.Markdown("---") with gr.Accordion("➕ Add your own YAML", open=False): new_yaml = gr.Code( language="yaml", lines=10, label="Paste a K8s manifest", ) add_btn = gr.Button( "Encode and add to comparison", variant="primary", ) add_err = gr.Markdown("") def _on_add(state, yaml_text): if not yaml_text or not yaml_text.strip(): return state, _build_preset_figure(state), \ _verdict_markdown_for(state), \ "_Empty YAML — nothing to add._" if len(state) >= len(_PRESET_LETTERS): return state, _build_preset_figure(state), \ _verdict_markdown_for(state), \ f"_Max {len(_PRESET_LETTERS)} manifests at once._" try: vec = _encode_doc_vec(yaml_text) except Exception as e: return state, _build_preset_figure(state), \ _verdict_markdown_for(state), \ f"_Encoding failed: `{type(e).__name__}: {e}`_" from yaml_bert.types import _extract_kind nodes = _LINEARIZER.linearize(yaml_text) kind = _extract_kind(nodes) or "?" preset_id = state[0]["preset_id"] if state else "" new_item = { "letter": _PRESET_LETTERS[len(state)], "name": f"{kind} (added)", "yaml": yaml_text, "vec": vec, "preset_id": preset_id, } new_state = state + [new_item] return (new_state, _build_preset_figure(new_state), _verdict_markdown_for(new_state), "") def _verdict_markdown_for(state): if not state: return "" preset = PRESET_BY_ID.get(state[0].get("preset_id", "")) return _verdict_markdown(preset, state) if preset else "" def _on_preset_change(preset_id): if preset_id not in PRESET_BY_ID: return gr.update(), gr.update(), gr.update(), gr.update() preset = PRESET_BY_ID[preset_id] items = PRESET_ITEMS_BY_ID[preset_id] return (items, _build_preset_figure(items), f"**Hypothesis:** {preset['hypothesis']}", _verdict_markdown(preset, items)) preset_dd.change( _on_preset_change, inputs=[preset_dd], outputs=[items_state, plot, hypothesis_md, verdict_md], ) add_btn.click( _on_add, inputs=[items_state, new_yaml], outputs=[items_state, plot, verdict_md, add_err], ) open_suggester.click(lambda: gr.Tabs(selected="suggester"), outputs=tabs) open_galaxy.click(lambda: gr.Tabs(selected="galaxy"), outputs=tabs) open_probes.click(lambda: gr.Tabs(selected="probes"), outputs=tabs) _log("Gradio UI built — launching") if __name__ == "__main__": # GRADIO_SHARE=true creates a temporary *.gradio.live tunnel. # Defaults off — Spaces deployment must stay local-bound. import os demo.launch( css=_TILE_CSS, share=os.environ.get("GRADIO_SHARE", "").lower() in ("1", "true", "yes"), )