ET_623_Project / config.yaml
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SPM:
path_to_csv: "fixed.csv"
identifier_column: "Identifier"
sequence_column: "Sequence"
sortby: "S-Support"
sliding_window_min: 1
sliding_window_max: 4
min_gap: 1
max_gap: 12
S_support_thresh: 0.4
I_support_thresh: 0
dataset_format: 0
DSM:
path_to_csv_left: "fixed.csv"
path_to_csv_right: "growth.csv"
identifier_column: "Identifier"
sequence_column: "Sequence"
sortby: "S-Support"
sliding_window_min: 1
sliding_window_max: 1
min_gap: 1
max_gap: 12
S_support_thresh: 0.4
I_support_thresh: 0
threshold_pvalue: 0.1
dataset_format: 0
test_type: "ttest_ind"
dsm_result_path: "/home/vivek.trivedi/ET623_project/dsm_result.csv"
spm_result_path: "/home/vivek.trivedi/ET623_project/spm_result.csv"
occurrence_matrix_path: "/home/vivek.trivedi/ET623_project/occurrence_matrix.csv"