Upload 4 files
Browse files- Dockerfile +2 -6
- app.py +40 -14
- build_fulltext_db.py +79 -41
- start.sh +7 -0
Dockerfile
CHANGED
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@@ -6,7 +6,7 @@ COPY requirements.txt .
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RUN pip install --no-cache-dir -r requirements.txt
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COPY app.py build_fulltext_db.py ./
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COPY static/ static/
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@@ -16,10 +16,6 @@ COPY CCRD/ CCRD/
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COPY CW/ CW/
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# Full-text indexes are derived artifacts. Build them inside the Space image so
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# the repository never needs to store SQLite files larger than the LFS limit.
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RUN python build_fulltext_db.py
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-
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EXPOSE 7860
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CMD ["
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RUN pip install --no-cache-dir -r requirements.txt
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COPY app.py build_fulltext_db.py start.sh ./
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COPY static/ static/
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COPY CW/ CW/
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EXPOSE 7860
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CMD ["sh", "/app/start.sh"]
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app.py
CHANGED
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@@ -5,6 +5,7 @@ import json
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import random
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import re
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import sqlite3
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import time
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import unicodedata
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from functools import lru_cache
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@@ -91,39 +92,63 @@ def decode_doc_numbers(payload: bytes, candidates: set[int] | None = None) -> se
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class FulltextDatabases:
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def __init__(self, directory: Path):
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self.connections = {}
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self.has_doc_counts = {}
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self.tokenizer_versions = {}
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self.has_content_fts = {}
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columns = {row[1] for row in connection.execute("PRAGMA table_info(postings)")}
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self.has_doc_counts[path.stem] = "doc_count" in columns
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has_metadata = connection.execute(
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"SELECT 1 FROM sqlite_master WHERE type = 'table' AND name = 'metadata'"
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).fetchone()
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version_row = connection.execute(
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"SELECT value FROM metadata WHERE key = 'tokenizer_version'"
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).fetchone() if has_metadata else None
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self.has_content_fts[path.stem] = bool(connection.execute(
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"SELECT 1 FROM sqlite_master WHERE type = 'table' AND name = 'content_fts'"
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).fetchone())
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def close(self) -> None:
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connection.
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def search_source(self, source: str, query: str, exact: bool = False) -> set[int]:
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version = self.tokenizer_versions.get(source)
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if exact and self.has_content_fts.get(source) and "*" not in query and "?" not in query and len(normalize_text(query)) >= 3:
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phrase = normalize_text(query)
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grams = [phrase[index:index + 3] for index in range(len(phrase) - 2)]
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try:
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match_query = " AND ".join('"' + gram.replace('"', '""') + '"' for gram in grams)
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rows = connection.execute(
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"SELECT rowid FROM content_fts WHERE content_fts MATCH ?",
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(f'"{phrase}"',),
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@@ -135,7 +160,7 @@ class FulltextDatabases:
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tokens = [*query_tokens(query), *literal_query_tokens(query)]
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else:
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tokens = query_tokens(query) if version == TOKENIZER_VERSION else query_terms(query)
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if
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return set()
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matched = None
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token_hashes = [hashlib.sha256(token.encode("utf-8")).digest()[:16] for token in tokens]
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@@ -173,6 +198,7 @@ class FulltextDatabases:
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)
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def summaries(self, doc_ids: list[str]) -> dict[str, str]:
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grouped = {}
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for doc_id in doc_ids:
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grouped.setdefault(doc_id.split(":", 1)[0], []).append(doc_id)
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import random
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import re
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import sqlite3
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import threading
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import time
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import unicodedata
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from functools import lru_cache
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class FulltextDatabases:
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def __init__(self, directory: Path):
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self.directory = directory
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self.lock = threading.RLock()
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self.connections = {}
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self.has_doc_counts = {}
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self.tokenizer_versions = {}
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self.has_content_fts = {}
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self.refresh()
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def refresh(self) -> None:
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with self.lock:
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for path in self.directory.glob("*.sqlite3"):
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if path.stem in self.connections:
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continue
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try:
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self._open(path)
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except sqlite3.Error as exc:
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print(f"fulltext_open_failed={path.name}:{exc}")
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def _open(self, path: Path) -> None:
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uri = f"file:{path.resolve()}?mode=ro&immutable=1"
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connection = sqlite3.connect(uri, uri=True, check_same_thread=False)
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try:
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columns = {row[1] for row in connection.execute("PRAGMA table_info(postings)")}
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has_metadata = connection.execute(
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"SELECT 1 FROM sqlite_master WHERE type = 'table' AND name = 'metadata'"
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).fetchone()
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version_row = connection.execute(
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"SELECT value FROM metadata WHERE key = 'tokenizer_version'"
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).fetchone() if has_metadata else None
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has_content_fts = bool(connection.execute(
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"SELECT 1 FROM sqlite_master WHERE type = 'table' AND name = 'content_fts'"
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).fetchone())
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except Exception:
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connection.close()
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raise
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self.connections[path.stem] = connection
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self.has_doc_counts[path.stem] = "doc_count" in columns
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self.tokenizer_versions[path.stem] = version_row[0] if version_row else "legacy"
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self.has_content_fts[path.stem] = has_content_fts
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def close(self) -> None:
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with self.lock:
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for connection in self.connections.values():
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connection.close()
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def search_source(self, source: str, query: str, exact: bool = False) -> set[int]:
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with self.lock:
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connection = self.connections.get(source)
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if connection is None:
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self.refresh()
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connection = self.connections.get(source)
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if connection is None:
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return set()
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version = self.tokenizer_versions.get(source)
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if exact and self.has_content_fts.get(source) and "*" not in query and "?" not in query and len(normalize_text(query)) >= 3:
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phrase = normalize_text(query).replace('"', '""')
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try:
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rows = connection.execute(
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"SELECT rowid FROM content_fts WHERE content_fts MATCH ?",
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(f'"{phrase}"',),
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tokens = [*query_tokens(query), *literal_query_tokens(query)]
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else:
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tokens = query_tokens(query) if version == TOKENIZER_VERSION else query_terms(query)
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if not tokens:
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return set()
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matched = None
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token_hashes = [hashlib.sha256(token.encode("utf-8")).digest()[:16] for token in tokens]
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)
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def summaries(self, doc_ids: list[str]) -> dict[str, str]:
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self.refresh()
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grouped = {}
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for doc_id in doc_ids:
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grouped.setdefault(doc_id.split(":", 1)[0], []).append(doc_id)
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build_fulltext_db.py
CHANGED
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@@ -3,8 +3,9 @@ import gzip
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import hashlib
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import json
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import re
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import sqlite3
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import
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import unicodedata
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from collections import defaultdict
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from pathlib import Path
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@@ -15,6 +16,7 @@ TOKEN_RE = re.compile(r"[a-z0-9]+|[\u4e00-\u9fff\u3400-\u4dbf]+")
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SUMMARY_CHARS = 700
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TOKENIZER_VERSION = "cjk-bigram-boundary-fts5-v5"
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LITERAL_PREFIX = "\0literal:"
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def load_json_gz(path: Path):
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return json.loads(gzip.decompress(path.read_bytes()).decode("utf-8"))
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def fts_content(text: str) -> str:
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return unicodedata.normalize("NFKC", text or "").casefold().replace("\0", " ")
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def build_source_db(source: str, source_records: list[dict]) -> None:
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db_path = FULLTEXT_DIR / f"{source}.sqlite3"
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tmp_path = db_path.with_suffix(".sqlite3.tmp")
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documents = []
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content_rows = []
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missing = 0
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if tmp_path.exists():
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tmp_path.unlink()
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tmp_path.replace(db_path)
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print(
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f"{source}: wrote {db_path.relative_to(BASE_DIR)} "
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f"with {
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)
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def main() -> None:
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import hashlib
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import json
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import re
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import shutil
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import sqlite3
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import struct
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import unicodedata
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from collections import defaultdict
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from pathlib import Path
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SUMMARY_CHARS = 700
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TOKENIZER_VERSION = "cjk-bigram-boundary-fts5-v5"
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LITERAL_PREFIX = "\0literal:"
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POSTING_BUCKETS = 256
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def load_json_gz(path: Path):
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return json.loads(gzip.decompress(path.read_bytes()).decode("utf-8"))
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def fts_content(text: str) -> str:
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return unicodedata.normalize("NFKC", text or "").casefold().replace("\0", " ")
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def database_ready(path: Path, expected_documents: int) -> bool:
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if not path.exists():
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return False
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try:
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uri = f"file:{path.resolve()}?mode=ro&immutable=1"
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with sqlite3.connect(uri, uri=True) as connection:
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version = connection.execute("SELECT value FROM metadata WHERE key = 'tokenizer_version'").fetchone()
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documents = int(connection.execute("SELECT COUNT(*) FROM documents").fetchone()[0])
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fts_rows = int(connection.execute("SELECT COUNT(*) FROM content_fts").fetchone()[0])
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return bool(version and version[0] == TOKENIZER_VERSION and documents == expected_documents and fts_rows == expected_documents)
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except Exception:
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return False
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def build_source_db(source: str, source_records: list[dict]) -> None:
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db_path = FULLTEXT_DIR / f"{source}.sqlite3"
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if database_ready(db_path, len(source_records)):
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print(f"{source}: current index already ready", flush=True)
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return
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tmp_path = db_path.with_suffix(".sqlite3.tmp")
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bucket_dir = FULLTEXT_DIR / f".{source}-postings"
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missing = 0
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if tmp_path.exists():
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tmp_path.unlink()
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shutil.rmtree(bucket_dir, ignore_errors=True)
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bucket_dir.mkdir(parents=True)
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bucket_files = [(bucket_dir / f"{index:02x}.bin").open("wb") for index in range(POSTING_BUCKETS)]
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document_count = 0
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posting_count = 0
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try:
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with sqlite3.connect(tmp_path) as connection:
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connection.execute("PRAGMA journal_mode = OFF")
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connection.execute("PRAGMA synchronous = OFF")
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connection.execute("PRAGMA temp_store = FILE")
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connection.execute("CREATE TABLE documents (doc_id TEXT PRIMARY KEY, summary TEXT NOT NULL)")
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connection.execute("CREATE TABLE postings (token_hash BLOB PRIMARY KEY, docs BLOB NOT NULL, doc_count INTEGER NOT NULL)")
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connection.execute("CREATE TABLE metadata (key TEXT PRIMARY KEY, value TEXT NOT NULL)")
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connection.execute("INSERT INTO metadata (key, value) VALUES ('tokenizer_version', ?)", (TOKENIZER_VERSION,))
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connection.execute("CREATE VIRTUAL TABLE content_fts USING fts5(content, tokenize='trigram', detail='full')")
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for index, record in enumerate(source_records, 1):
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doc_id = record["doc_id"]
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file_path = get_doc_storage_path(record)
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if not file_path.exists():
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missing += 1
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continue
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text = file_path.read_text(encoding="utf-8", errors="ignore")
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number = doc_number(doc_id)
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connection.execute("INSERT INTO documents (doc_id, summary) VALUES (?, ?)", (doc_id, build_summary(text)))
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connection.execute("INSERT INTO content_fts (rowid, content) VALUES (?, ?)", (number, fts_content(text)))
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document_count += 1
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for token in index_tokens(text) | literal_tokens(text):
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token_hash = hashlib.sha256(token.encode("utf-8")).digest()[:16]
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bucket_files[token_hash[0]].write(token_hash + struct.pack(">I", number))
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if index % 100 == 0:
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connection.commit()
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if index % 1000 == 0:
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print(f"{source}: indexed {index}/{len(source_records)} records", flush=True)
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connection.commit()
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for bucket_file in bucket_files:
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bucket_file.close()
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for bucket_index in range(POSTING_BUCKETS):
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grouped: dict[bytes, list[int]] = defaultdict(list)
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with (bucket_dir / f"{bucket_index:02x}.bin").open("rb") as source_file:
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while chunk := source_file.read(20):
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if len(chunk) != 20:
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raise RuntimeError("corrupt posting bucket")
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grouped[chunk[:16]].append(struct.unpack(">I", chunk[16:])[0])
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connection.executemany(
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"INSERT INTO postings (token_hash, docs, doc_count) VALUES (?, ?, ?)",
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((token_hash, encode_doc_ids(numbers), len(numbers)) for token_hash, numbers in grouped.items()),
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)
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posting_count += len(grouped)
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if bucket_index % 16 == 15:
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connection.commit()
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print(f"{source}: merged posting buckets {bucket_index + 1}/{POSTING_BUCKETS}", flush=True)
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connection.execute("CREATE INDEX idx_documents_doc_id ON documents(doc_id)")
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finally:
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for bucket_file in bucket_files:
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if not bucket_file.closed:
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bucket_file.close()
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shutil.rmtree(bucket_dir, ignore_errors=True)
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tmp_path.replace(db_path)
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print(
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f"{source}: wrote {db_path.relative_to(BASE_DIR)} "
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f"with {document_count} documents, {posting_count} tokens, {missing} missing files",
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flush=True,
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)
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def main() -> None:
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start.sh
ADDED
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#!/bin/sh
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set -eu
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mkdir -p /app/data/fulltext
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python /app/build_fulltext_db.py &
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exec uvicorn app:app --host 0.0.0.0 --port 7860 --log-level info
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