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Update app.py
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app.py
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@@ -221,7 +221,7 @@ def generate_peptide_for_single_sequence(model, tokenizer, protein_seq, peptide_
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end = time.time()
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elapsed = end - start
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return binders_with_ppl_plddt
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@@ -271,6 +271,7 @@ def predict_peptide_from_file(base_model_path, finetuned_model_path, file_obj, m
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results = []
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for i, row in input.iterrows():
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#protein_seq = row['Receptor Sequence']
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#peptide_seq = row['Peptide Sequence']
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protein_seq = row['P_Sequence']
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end = time.time()
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elapsed = end - start
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print(f'generate_peptide_for_single_sequence: {elapsed:.4f} seconds')
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return binders_with_ppl_plddt
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results = []
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for i, row in input.iterrows():
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print("sequence:", i)
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#protein_seq = row['Receptor Sequence']
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#peptide_seq = row['Peptide Sequence']
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protein_seq = row['P_Sequence']
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