wangjin2000 commited on
Commit
5539efa
·
verified ·
1 Parent(s): ff7b8e3

Update app.py

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Files changed (1) hide show
  1. app.py +2 -1
app.py CHANGED
@@ -221,7 +221,7 @@ def generate_peptide_for_single_sequence(model, tokenizer, protein_seq, peptide_
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  end = time.time()
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  elapsed = end - start
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- #print(f'generate_peptide_for_single_sequence: {elapsed:.4f} seconds')
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  return binders_with_ppl_plddt
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@@ -271,6 +271,7 @@ def predict_peptide_from_file(base_model_path, finetuned_model_path, file_obj, m
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  results = []
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  for i, row in input.iterrows():
 
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  #protein_seq = row['Receptor Sequence']
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  #peptide_seq = row['Peptide Sequence']
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  protein_seq = row['P_Sequence']
 
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  end = time.time()
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  elapsed = end - start
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+ print(f'generate_peptide_for_single_sequence: {elapsed:.4f} seconds')
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  return binders_with_ppl_plddt
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  results = []
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  for i, row in input.iterrows():
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+ print("sequence:", i)
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  #protein_seq = row['Receptor Sequence']
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  #peptide_seq = row['Peptide Sequence']
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  protein_seq = row['P_Sequence']