Spaces:
Paused
Paused
Update app.py
Browse files
app.py
CHANGED
|
@@ -1,9 +1,16 @@
|
|
| 1 |
#ref: https://huggingface.co/blog/AmelieSchreiber/esmbind
|
| 2 |
import gradio as gr
|
| 3 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 4 |
import os
|
| 5 |
-
# os.environ["CUDA_VISIBLE_DEVICES"] = "0"
|
| 6 |
-
#import wandb
|
| 7 |
import numpy as np
|
| 8 |
import torch
|
| 9 |
import torch.nn as nn
|
|
@@ -34,6 +41,7 @@ from accelerate import Accelerator
|
|
| 34 |
from peft import get_peft_config, PeftModel, PeftConfig, get_peft_model, LoraConfig, TaskType
|
| 35 |
|
| 36 |
from plot_pdb import plot_struc
|
|
|
|
| 37 |
|
| 38 |
def suggest(option):
|
| 39 |
if option == "Plastic degradation protein":
|
|
|
|
| 1 |
#ref: https://huggingface.co/blog/AmelieSchreiber/esmbind
|
| 2 |
import gradio as gr
|
| 3 |
|
| 4 |
+
from transformers import Trainer, TrainingArguments, AutoTokenizer, EsmForMaskedLM, TrainerCallback
|
| 5 |
+
from torch.utils.data import DataLoader, Dataset, RandomSampler
|
| 6 |
+
import pandas as pd
|
| 7 |
+
import torch
|
| 8 |
+
from torch.optim import AdamW
|
| 9 |
+
import wandb
|
| 10 |
+
import numpy as np
|
| 11 |
+
|
| 12 |
+
'''
|
| 13 |
import os
|
|
|
|
|
|
|
| 14 |
import numpy as np
|
| 15 |
import torch
|
| 16 |
import torch.nn as nn
|
|
|
|
| 41 |
from peft import get_peft_config, PeftModel, PeftConfig, get_peft_model, LoraConfig, TaskType
|
| 42 |
|
| 43 |
from plot_pdb import plot_struc
|
| 44 |
+
'''
|
| 45 |
|
| 46 |
def suggest(option):
|
| 47 |
if option == "Plastic degradation protein":
|