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Update app.py
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app.py
CHANGED
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@@ -134,13 +134,18 @@ if not df_binary.empty:
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df_robot = df_binary.copy()
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df_robot.insert(0, 'Sample', range(1, len(df_robot) + 1))
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df_robot['# donors'] = df_robot.iloc[:, 1:].astype(int).sum(axis=1)
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df_robot['volume donors (µL)'] =
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robot_script = []
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source_wells = generate_source_wells(df_robot.shape[1] - 1)
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for i, col in enumerate(df_robot.columns[1:]):
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for _, sample in df_robot.iterrows():
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if int(sample[col]) == 1:
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sample_id = int(sample['Sample'])
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plate = get_plate_id(sample_id)
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df_robot = df_binary.copy()
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df_robot.insert(0, 'Sample', range(1, len(df_robot) + 1))
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df_robot['# donors'] = df_robot.iloc[:, 1:].astype(int).sum(axis=1)
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df_robot['volume donors (µL)'] = df_robot['# donors'].apply(
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lambda x: 64 / x if x > 0 else 0
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)
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robot_script = []
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source_wells = generate_source_wells(df_robot.shape[1] - 1)
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for i, col in enumerate(df_robot.columns[1:]):
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for _, sample in df_robot.iterrows():
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if sample['# donors'] == 0:
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continue # skip samples with no donors
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if int(sample[col]) == 1:
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sample_id = int(sample['Sample'])
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plate = get_plate_id(sample_id)
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