Spaces:
Sleeping
Sleeping
Update app.py
Browse files
app.py
CHANGED
|
@@ -34,22 +34,6 @@ def image_to_binary_labels_rgb(img: Image.Image, max_pixels: int = 256) -> list[
|
|
| 34 |
bits.extend(channel_bits)
|
| 35 |
return bits
|
| 36 |
|
| 37 |
-
def binary_labels_to_image(binary_labels: list[int], width: int = None, height: int = None) -> Image.Image:
|
| 38 |
-
"""
|
| 39 |
-
Convert binary labels (0/1) into a grayscale image.
|
| 40 |
-
"""
|
| 41 |
-
total_pixels = len(binary_labels)
|
| 42 |
-
if width is None or height is None:
|
| 43 |
-
side = int(np.ceil(np.sqrt(total_pixels)))
|
| 44 |
-
width = height = side
|
| 45 |
-
needed_pixels = width * height
|
| 46 |
-
if total_pixels < needed_pixels:
|
| 47 |
-
binary_labels += [0] * (needed_pixels - total_pixels)
|
| 48 |
-
array = np.array(binary_labels, dtype=np.uint8) * 255
|
| 49 |
-
image_array = array.reshape((height, width))
|
| 50 |
-
img = Image.fromarray(image_array, mode='L')
|
| 51 |
-
return img
|
| 52 |
-
|
| 53 |
def binary_labels_to_rgb_image(binary_labels: list[int], width: int = None, height: int = None) -> Image.Image:
|
| 54 |
"""
|
| 55 |
Convert binary labels (0/1) into an RGB image.
|
|
@@ -138,7 +122,7 @@ with tab2:
|
|
| 138 |
img = Image.open(uploaded_file)
|
| 139 |
st.image(img, caption="Uploaded Image", use_column_width=True)
|
| 140 |
|
| 141 |
-
max_pixels = st.slider("Max number of pixels to encode", min_value=32, max_value=
|
| 142 |
|
| 143 |
binary_labels = image_to_binary_labels_rgb(img, max_pixels=max_pixels)
|
| 144 |
|
|
@@ -158,6 +142,10 @@ with tab2:
|
|
| 158 |
df = pd.DataFrame(table_data, columns=[str(h) for h in mutation_site_headers] + ["Edited Sites"])
|
| 159 |
st.dataframe(df)
|
| 160 |
|
|
|
|
|
|
|
|
|
|
|
|
|
| 161 |
st.download_button(
|
| 162 |
label="Download Image Binary Labels as CSV",
|
| 163 |
data=','.join(str(b) for b in binary_labels),
|
|
@@ -165,14 +153,4 @@ with tab2:
|
|
| 165 |
mime="text/csv"
|
| 166 |
)
|
| 167 |
|
| 168 |
-
|
| 169 |
-
option = st.radio("Choose Reconstruction Mode", ["Grayscale", "True Color (RGB)"])
|
| 170 |
-
|
| 171 |
-
if st.button("Reconstruct Image"):
|
| 172 |
-
if option == "Grayscale":
|
| 173 |
-
reconstructed_img = binary_labels_to_image(binary_labels)
|
| 174 |
-
else:
|
| 175 |
-
reconstructed_img = binary_labels_to_rgb_image(binary_labels)
|
| 176 |
-
st.image(reconstructed_img, caption="Reconstructed Image", use_column_width=True)
|
| 177 |
-
|
| 178 |
-
# Future: integrate DNA editor mapping for each mutation site here
|
|
|
|
| 34 |
bits.extend(channel_bits)
|
| 35 |
return bits
|
| 36 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 37 |
def binary_labels_to_rgb_image(binary_labels: list[int], width: int = None, height: int = None) -> Image.Image:
|
| 38 |
"""
|
| 39 |
Convert binary labels (0/1) into an RGB image.
|
|
|
|
| 122 |
img = Image.open(uploaded_file)
|
| 123 |
st.image(img, caption="Uploaded Image", use_column_width=True)
|
| 124 |
|
| 125 |
+
max_pixels = st.slider("Max number of pixels to encode", min_value=32, max_value=1024, value=256, step=32)
|
| 126 |
|
| 127 |
binary_labels = image_to_binary_labels_rgb(img, max_pixels=max_pixels)
|
| 128 |
|
|
|
|
| 142 |
df = pd.DataFrame(table_data, columns=[str(h) for h in mutation_site_headers] + ["Edited Sites"])
|
| 143 |
st.dataframe(df)
|
| 144 |
|
| 145 |
+
st.subheader("Reconstructed RGB Image")
|
| 146 |
+
reconstructed_img = binary_labels_to_rgb_image(binary_labels)
|
| 147 |
+
st.image(reconstructed_img, caption="Reconstructed Image", use_column_width=True)
|
| 148 |
+
|
| 149 |
st.download_button(
|
| 150 |
label="Download Image Binary Labels as CSV",
|
| 151 |
data=','.join(str(b) for b in binary_labels),
|
|
|
|
| 153 |
mime="text/csv"
|
| 154 |
)
|
| 155 |
|
| 156 |
+
# Future: integrate DNA editor mapping for each mutation site here
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|