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Weiyu Liu
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Commit
·
405900e
1
Parent(s):
b7dd541
remove dep on pytorch3d
Browse files
app.py
CHANGED
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@@ -16,10 +16,50 @@ from StructDiffusion.models.pl_models import ConditionalPoseDiffusionModel
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from StructDiffusion.diffusion.sampler import Sampler
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from StructDiffusion.diffusion.pose_conversion import get_struct_objs_poses
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from StructDiffusion.utils.files import get_checkpoint_path_from_dir
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-
from StructDiffusion.utils.batch_inference import move_pc_and_create_scene_simple, visualize_batch_pcs
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from StructDiffusion.utils.rearrangement import show_pcs_with_trimesh
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class Infer_Wrapper:
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def __init__(self, args, cfg):
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from StructDiffusion.diffusion.sampler import Sampler
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from StructDiffusion.diffusion.pose_conversion import get_struct_objs_poses
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from StructDiffusion.utils.files import get_checkpoint_path_from_dir
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from StructDiffusion.utils.rearrangement import show_pcs_with_trimesh
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def move_pc_and_create_scene_simple(obj_xyzs, struct_pose, pc_poses_in_struct):
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device = obj_xyzs.device
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# obj_xyzs: B, N, P, 3 or 6
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# struct_pose: B, 1, 4, 4
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# pc_poses_in_struct: B, N, 4, 4
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B, N, _, _ = pc_poses_in_struct.shape
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_, _, P, _ = obj_xyzs.shape
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current_pc_poses = torch.eye(4).repeat(B, N, 1, 1).to(device) # B, N, 4, 4
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# print(torch.mean(obj_xyzs, dim=2).shape)
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current_pc_poses[:, :, :3, 3] = torch.mean(obj_xyzs[:, :, :, :3], dim=2) # B, N, 4, 4
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current_pc_poses = current_pc_poses.reshape(B * N, 4, 4) # B x N, 4, 4
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struct_pose = struct_pose.repeat(1, N, 1, 1) # B, N, 4, 4
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struct_pose = struct_pose.reshape(B * N, 4, 4) # B x 1, 4, 4
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pc_poses_in_struct = pc_poses_in_struct.reshape(B * N, 4, 4) # B x N, 4, 4
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goal_pc_pose = struct_pose @ pc_poses_in_struct # B x N, 4, 4
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# print("goal pc poses")
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# print(goal_pc_pose)
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goal_pc_transform = goal_pc_pose @ torch.inverse(current_pc_poses) # B x N, 4, 4
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# # important: pytorch3d uses row-major ordering, need to transpose each transformation matrix
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# transpose = tra3d.Transform3d(matrix=goal_pc_transform.transpose(1, 2))
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# new_obj_xyzs = obj_xyzs.reshape(B * N, P, -1) # B x N, P, 3
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# new_obj_xyzs[:, :, :3] = transpose.transform_points(new_obj_xyzs[:, :, :3])
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# a verision that does not rely on pytorch3d
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new_obj_xyzs = obj_xyzs.reshape(B * N, P, -1)[:, :, :3] # B x N, P, 3
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new_obj_xyzs = torch.concat([new_obj_xyzs, torch.ones(B * N, P, 1).to(device)], dim=-1) # B x N, P, 4
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new_obj_xyzs = torch.einsum('bij,bkj->bki', goal_pc_transform, new_obj_xyzs)[:, :, :3] # # B x N, P, 3
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# put it back to B, N, P, 3
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obj_xyzs[:, :, :, :3] = new_obj_xyzs.reshape(B, N, P, -1)
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return obj_xyzs
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class Infer_Wrapper:
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def __init__(self, args, cfg):
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requirements.txt
CHANGED
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@@ -7,8 +7,4 @@ pyglet==1.5.0
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openpyxl
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pytorch_lightning==1.6.1
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wandb===0.13.10
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omegaconf==2.2.2
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torch==1.12.0+cpu
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torchvision==0.13.0+cpu
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torchaudio==0.12.0
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git+https://github.com/facebookresearch/pytorch3d.git@stable
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openpyxl
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pytorch_lightning==1.6.1
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wandb===0.13.10
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omegaconf==2.2.2
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src/StructDiffusion/diffusion/__pycache__/pose_conversion.cpython-38.pyc
CHANGED
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Binary files a/src/StructDiffusion/diffusion/__pycache__/pose_conversion.cpython-38.pyc and b/src/StructDiffusion/diffusion/__pycache__/pose_conversion.cpython-38.pyc differ
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src/StructDiffusion/diffusion/__pycache__/sampler.cpython-38.pyc
CHANGED
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Binary files a/src/StructDiffusion/diffusion/__pycache__/sampler.cpython-38.pyc and b/src/StructDiffusion/diffusion/__pycache__/sampler.cpython-38.pyc differ
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src/StructDiffusion/diffusion/pose_conversion.py
CHANGED
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@@ -1,6 +1,5 @@
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import os
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import torch
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import pytorch3d.transforms as tra3d
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from StructDiffusion.utils.rotation_continuity import compute_rotation_matrix_from_ortho6d
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import os
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import torch
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from StructDiffusion.utils.rotation_continuity import compute_rotation_matrix_from_ortho6d
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src/StructDiffusion/diffusion/sampler.py
CHANGED
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@@ -1,6 +1,6 @@
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import torch
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from tqdm import tqdm
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import pytorch3d.transforms as tra3d
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from StructDiffusion.diffusion.noise_schedule import extract
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from StructDiffusion.diffusion.pose_conversion import get_struct_objs_poses
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@@ -61,236 +61,236 @@ class Sampler:
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xs = list(reversed(xs))
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return xs
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class SamplerV2:
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import torch
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from tqdm import tqdm
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# import pytorch3d.transforms as tra3d
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from StructDiffusion.diffusion.noise_schedule import extract
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from StructDiffusion.diffusion.pose_conversion import get_struct_objs_poses
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xs = list(reversed(xs))
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return xs
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# class SamplerV2:
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#
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# def __init__(self, diffusion_model_class, diffusion_checkpoint_path,
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# collision_model_class, collision_checkpoint_path,
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# device, debug=False):
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#
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# self.debug = debug
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# self.device = device
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#
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# self.diffusion_model = diffusion_model_class.load_from_checkpoint(diffusion_checkpoint_path)
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# self.diffusion_backbone = self.diffusion_model.model
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# self.diffusion_backbone.to(device)
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# self.diffusion_backbone.eval()
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#
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# self.collision_model = collision_model_class.load_from_checkpoint(collision_checkpoint_path)
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# self.collision_backbone = self.collision_model.model
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# self.collision_backbone.to(device)
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# self.collision_backbone.eval()
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#
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# def sample(self, batch, num_poses):
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#
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# noise_schedule = self.diffusion_model.noise_schedule
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#
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# B = batch["pcs"].shape[0]
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#
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# x_noisy = torch.randn((B, num_poses, 9), device=self.device)
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#
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# xs = []
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# for t_index in tqdm(reversed(range(0, noise_schedule.timesteps)),
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# desc='sampling loop time step', total=noise_schedule.timesteps):
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#
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# t = torch.full((B,), t_index, device=self.device, dtype=torch.long)
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#
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# # noise schedule
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# betas_t = extract(noise_schedule.betas, t, x_noisy.shape)
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# sqrt_one_minus_alphas_cumprod_t = extract(noise_schedule.sqrt_one_minus_alphas_cumprod, t, x_noisy.shape)
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# sqrt_recip_alphas_t = extract(noise_schedule.sqrt_recip_alphas, t, x_noisy.shape)
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#
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# # predict noise
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# pcs = batch["pcs"]
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# sentence = batch["sentence"]
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# type_index = batch["type_index"]
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# position_index = batch["position_index"]
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# pad_mask = batch["pad_mask"]
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# # calling the backbone instead of the pytorch-lightning model
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# with torch.no_grad():
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# predicted_noise = self.diffusion_backbone.forward(t, pcs, sentence, x_noisy, type_index, position_index, pad_mask)
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#
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# # compute noisy x at t
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# model_mean = sqrt_recip_alphas_t * (x_noisy - betas_t * predicted_noise / sqrt_one_minus_alphas_cumprod_t)
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# if t_index == 0:
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# x_noisy = model_mean
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# else:
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# posterior_variance_t = extract(noise_schedule.posterior_variance, t, x_noisy.shape)
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# noise = torch.randn_like(x_noisy)
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# x_noisy = model_mean + torch.sqrt(posterior_variance_t) * noise
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#
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# xs.append(x_noisy)
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#
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# xs = list(reversed(xs))
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#
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# visualize = True
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#
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# struct_pose, pc_poses_in_struct = get_struct_objs_poses(xs[0])
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# # struct_pose: B, 1, 4, 4
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# # pc_poses_in_struct: B, N, 4, 4
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#
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# S = B
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# num_elite = 10
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# ####################################################
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# # only keep one copy
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#
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# # N, P, 3
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# obj_xyzs = batch["pcs"][0][:, :, :3]
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# print("obj_xyzs shape", obj_xyzs.shape)
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#
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# # 1, N
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# # object_pad_mask: padding location has 1
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# num_target_objs = num_poses
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# if self.diffusion_backbone.use_virtual_structure_frame:
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# num_target_objs -= 1
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# object_pad_mask = batch["pad_mask"][0][-num_target_objs:].unsqueeze(0)
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# target_object_inds = 1 - object_pad_mask
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# print("target_object_inds shape", target_object_inds.shape)
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# print("target_object_inds", target_object_inds)
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#
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# N, P, _ = obj_xyzs.shape
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# print("S, N, P: {}, {}, {}".format(S, N, P))
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#
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# ####################################################
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# # S, N, ...
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#
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# struct_pose = struct_pose.repeat(1, N, 1, 1) # S, N, 4, 4
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| 157 |
+
# struct_pose = struct_pose.reshape(S * N, 4, 4) # S x N, 4, 4
|
| 158 |
+
#
|
| 159 |
+
# new_obj_xyzs = obj_xyzs.repeat(S, 1, 1, 1) # S, N, P, 3
|
| 160 |
+
# current_pc_pose = torch.eye(4).repeat(S, N, 1, 1).to(self.device) # S, N, 4, 4
|
| 161 |
+
# current_pc_pose[:, :, :3, 3] = torch.mean(new_obj_xyzs, dim=2) # S, N, 4, 4
|
| 162 |
+
# current_pc_pose = current_pc_pose.reshape(S * N, 4, 4) # S x N, 4, 4
|
| 163 |
+
#
|
| 164 |
+
# # optimize xyzrpy
|
| 165 |
+
# obj_params = torch.zeros((S, N, 6)).to(self.device)
|
| 166 |
+
# obj_params[:, :, :3] = pc_poses_in_struct[:, :, :3, 3]
|
| 167 |
+
# obj_params[:, :, 3:] = tra3d.matrix_to_euler_angles(pc_poses_in_struct[:, :, :3, :3], "XYZ") # S, N, 6
|
| 168 |
+
# #
|
| 169 |
+
# # new_obj_xyzs_before_cem, goal_pc_pose_before_cem = move_pc(obj_xyzs, obj_params, struct_pose, current_pc_pose, device)
|
| 170 |
+
# #
|
| 171 |
+
# # if visualize:
|
| 172 |
+
# # print("visualizing rearrangements predicted by the generator")
|
| 173 |
+
# # visualize_batch_pcs(new_obj_xyzs_before_cem, S, N, P, limit_B=5)
|
| 174 |
+
#
|
| 175 |
+
# ####################################################
|
| 176 |
+
# # rank
|
| 177 |
+
#
|
| 178 |
+
# # evaluate in batches
|
| 179 |
+
# scores = torch.zeros(S).to(self.device)
|
| 180 |
+
# no_intersection_scores = torch.zeros(S).to(self.device) # the higher the better
|
| 181 |
+
# num_batches = int(S / B)
|
| 182 |
+
# if S % B != 0:
|
| 183 |
+
# num_batches += 1
|
| 184 |
+
# for b in range(num_batches):
|
| 185 |
+
# if b + 1 == num_batches:
|
| 186 |
+
# cur_batch_idxs_start = b * B
|
| 187 |
+
# cur_batch_idxs_end = S
|
| 188 |
+
# else:
|
| 189 |
+
# cur_batch_idxs_start = b * B
|
| 190 |
+
# cur_batch_idxs_end = (b + 1) * B
|
| 191 |
+
# cur_batch_size = cur_batch_idxs_end - cur_batch_idxs_start
|
| 192 |
+
#
|
| 193 |
+
# # print("current batch idxs start", cur_batch_idxs_start)
|
| 194 |
+
# # print("current batch idxs end", cur_batch_idxs_end)
|
| 195 |
+
# # print("size of the current batch", cur_batch_size)
|
| 196 |
+
#
|
| 197 |
+
# batch_obj_params = obj_params[cur_batch_idxs_start: cur_batch_idxs_end]
|
| 198 |
+
# batch_struct_pose = struct_pose[cur_batch_idxs_start * N: cur_batch_idxs_end * N]
|
| 199 |
+
# batch_current_pc_pose = current_pc_pose[cur_batch_idxs_start * N:cur_batch_idxs_end * N]
|
| 200 |
+
#
|
| 201 |
+
# new_obj_xyzs, _, subsampled_scene_xyz, _, obj_pair_xyzs = \
|
| 202 |
+
# move_pc_and_create_scene_new(obj_xyzs, batch_obj_params, batch_struct_pose, batch_current_pc_pose,
|
| 203 |
+
# target_object_inds, self.device,
|
| 204 |
+
# return_scene_pts=False,
|
| 205 |
+
# return_scene_pts_and_pc_idxs=False,
|
| 206 |
+
# num_scene_pts=False,
|
| 207 |
+
# normalize_pc=False,
|
| 208 |
+
# return_pair_pc=True,
|
| 209 |
+
# num_pair_pc_pts=self.collision_model.data_cfg.num_scene_pts,
|
| 210 |
+
# normalize_pair_pc=self.collision_model.data_cfg.normalize_pc)
|
| 211 |
+
#
|
| 212 |
+
# #######################################
|
| 213 |
+
# # predict whether there are pairwise collisions
|
| 214 |
+
# # if collision_score_weight > 0:
|
| 215 |
+
# with torch.no_grad():
|
| 216 |
+
# _, num_comb, num_pair_pc_pts, _ = obj_pair_xyzs.shape
|
| 217 |
+
# # obj_pair_xyzs = obj_pair_xyzs.reshape(cur_batch_size * num_comb, num_pair_pc_pts, -1)
|
| 218 |
+
# collision_logits = self.collision_backbone.forward(obj_pair_xyzs.reshape(cur_batch_size * num_comb, num_pair_pc_pts, -1))
|
| 219 |
+
# collision_scores = self.collision_backbone.convert_logits(collision_logits).reshape(cur_batch_size, num_comb) # cur_batch_size, num_comb
|
| 220 |
+
#
|
| 221 |
+
# # debug
|
| 222 |
+
# # for bi, this_obj_pair_xyzs in enumerate(obj_pair_xyzs):
|
| 223 |
+
# # print("batch id", bi)
|
| 224 |
+
# # for pi, obj_pair_xyz in enumerate(this_obj_pair_xyzs):
|
| 225 |
+
# # print("pair", pi)
|
| 226 |
+
# # # obj_pair_xyzs: 2 * P, 5
|
| 227 |
+
# # print("collision score", collision_scores[bi, pi])
|
| 228 |
+
# # trimesh.PointCloud(obj_pair_xyz[:, :3].cpu()).show()
|
| 229 |
+
#
|
| 230 |
+
# # 1 - mean() since the collision model predicts 1 if there is a collision
|
| 231 |
+
# no_intersection_scores[cur_batch_idxs_start:cur_batch_idxs_end] = 1 - torch.mean(collision_scores, dim=1)
|
| 232 |
+
# if visualize:
|
| 233 |
+
# print("no intersection scores", no_intersection_scores)
|
| 234 |
+
# # #######################################
|
| 235 |
+
# # if discriminator_score_weight > 0:
|
| 236 |
+
# # # # debug:
|
| 237 |
+
# # # print(subsampled_scene_xyz.shape)
|
| 238 |
+
# # # print(subsampled_scene_xyz[0])
|
| 239 |
+
# # # trimesh.PointCloud(subsampled_scene_xyz[0, :, :3].cpu().numpy()).show()
|
| 240 |
+
# # #
|
| 241 |
+
# # with torch.no_grad():
|
| 242 |
+
# #
|
| 243 |
+
# # # Important: since this discriminator only uses local structure param, takes sentence from the first and last position
|
| 244 |
+
# # # local_sentence = sentence[:, [0, 4]]
|
| 245 |
+
# # # local_sentence_pad_mask = sentence_pad_mask[:, [0, 4]]
|
| 246 |
+
# # # sentence_disc, sentence_pad_mask_disc, position_index_dic = discriminator_inference.dataset.tensorfy_sentence(raw_sentence_discriminator, raw_sentence_pad_mask_discriminator, raw_position_index_discriminator)
|
| 247 |
+
# #
|
| 248 |
+
# # sentence_disc = torch.LongTensor(
|
| 249 |
+
# # [discriminator_tokenizer.tokenize(*i) for i in raw_sentence_discriminator])
|
| 250 |
+
# # sentence_pad_mask_disc = torch.LongTensor(raw_sentence_pad_mask_discriminator)
|
| 251 |
+
# # position_index_dic = torch.LongTensor(raw_position_index_discriminator)
|
| 252 |
+
# #
|
| 253 |
+
# # preds = discriminator_model.forward(subsampled_scene_xyz,
|
| 254 |
+
# # sentence_disc.unsqueeze(0).repeat(cur_batch_size, 1).to(device),
|
| 255 |
+
# # sentence_pad_mask_disc.unsqueeze(0).repeat(cur_batch_size,
|
| 256 |
+
# # 1).to(device),
|
| 257 |
+
# # position_index_dic.unsqueeze(0).repeat(cur_batch_size, 1).to(
|
| 258 |
+
# # device))
|
| 259 |
+
# # # preds = discriminator_model.forward(subsampled_scene_xyz)
|
| 260 |
+
# # preds = discriminator_model.convert_logits(preds)
|
| 261 |
+
# # preds = preds["is_circle"] # cur_batch_size,
|
| 262 |
+
# # scores[cur_batch_idxs_start:cur_batch_idxs_end] = preds
|
| 263 |
+
# # if visualize:
|
| 264 |
+
# # print("discriminator scores", scores)
|
| 265 |
+
#
|
| 266 |
+
# # scores = scores * discriminator_score_weight + no_intersection_scores * collision_score_weight
|
| 267 |
+
# scores = no_intersection_scores
|
| 268 |
+
# sort_idx = torch.argsort(scores).flip(dims=[0])[:num_elite]
|
| 269 |
+
# elite_obj_params = obj_params[sort_idx] # num_elite, N, 6
|
| 270 |
+
# elite_struct_poses = struct_pose.reshape(S, N, 4, 4)[sort_idx] # num_elite, N, 4, 4
|
| 271 |
+
# elite_struct_poses = elite_struct_poses.reshape(num_elite * N, 4, 4) # num_elite x N, 4, 4
|
| 272 |
+
# elite_scores = scores[sort_idx]
|
| 273 |
+
# print("elite scores:", elite_scores)
|
| 274 |
+
#
|
| 275 |
+
# ####################################################
|
| 276 |
+
# # # visualize best samples
|
| 277 |
+
# # num_scene_pts = 4096 # if discriminator_num_scene_pts is None else discriminator_num_scene_pts
|
| 278 |
+
# # batch_current_pc_pose = current_pc_pose[0: num_elite * N]
|
| 279 |
+
# # best_new_obj_xyzs, best_goal_pc_pose, best_subsampled_scene_xyz, _, _ = \
|
| 280 |
+
# # move_pc_and_create_scene_new(obj_xyzs, elite_obj_params, elite_struct_poses, batch_current_pc_pose,
|
| 281 |
+
# # target_object_inds, self.device,
|
| 282 |
+
# # return_scene_pts=True, num_scene_pts=num_scene_pts, normalize_pc=True)
|
| 283 |
+
# # if visualize:
|
| 284 |
+
# # print("visualizing elite rearrangements ranked by collision model/discriminator")
|
| 285 |
+
# # visualize_batch_pcs(best_new_obj_xyzs, num_elite, limit_B=num_elite)
|
| 286 |
+
#
|
| 287 |
+
# # num_elite, N, 6
|
| 288 |
+
# elite_obj_params = elite_obj_params.reshape(num_elite * N, -1)
|
| 289 |
+
# pc_poses_in_struct = torch.eye(4).repeat(num_elite * N, 1, 1).to(self.device)
|
| 290 |
+
# pc_poses_in_struct[:, :3, :3] = tra3d.euler_angles_to_matrix(elite_obj_params[:, 3:], "XYZ")
|
| 291 |
+
# pc_poses_in_struct[:, :3, 3] = elite_obj_params[:, :3]
|
| 292 |
+
# pc_poses_in_struct = pc_poses_in_struct.reshape(num_elite, N, 4, 4) # num_elite, N, 4, 4
|
| 293 |
+
#
|
| 294 |
+
# struct_pose = elite_struct_poses.reshape(num_elite, N, 4, 4)[:, 0,].unsqueeze(1) # num_elite, 1, 4, 4
|
| 295 |
+
#
|
| 296 |
+
# return struct_pose, pc_poses_in_struct
|