xfu314's picture
Add phantom project with submodules and dependencies
96da58e
"""
A collection of utility functions for working with files, such as reading metadata from
demonstration datasets, loading model checkpoints, or downloading dataset files.
"""
import os
import h5py
import json
import time
import urllib.request
import numpy as np
from collections import OrderedDict
from tqdm import tqdm
import torch
import robomimic.utils.obs_utils as ObsUtils
import robomimic.utils.env_utils as EnvUtils
import robomimic.utils.torch_utils as TorchUtils
from robomimic.config import config_factory
from robomimic.algo import algo_factory
from robomimic.algo import RolloutPolicy
def create_hdf5_filter_key(hdf5_path, demo_keys, key_name):
"""
Creates a new hdf5 filter key in hdf5 file @hdf5_path with
name @key_name that corresponds to the demonstrations
@demo_keys. Filter keys are generally useful to create
named subsets of the demonstrations in an hdf5, making it
easy to train, test, or report statistics on a subset of
the trajectories in a file.
Returns the list of episode lengths that correspond to the filtering.
Args:
hdf5_path (str): path to hdf5 file
demo_keys ([str]): list of demonstration keys which should
correspond to this filter key. For example, ["demo_0",
"demo_1"].
key_name (str): name of filter key to create
Returns:
ep_lengths ([int]): list of episode lengths that corresponds to
each demonstration in the new filter key
"""
f = h5py.File(hdf5_path, "a")
demos = sorted(list(f["data"].keys()))
# collect episode lengths for the keys of interest
ep_lengths = []
for ep in demos:
ep_data_grp = f["data/{}".format(ep)]
if ep in demo_keys:
ep_lengths.append(ep_data_grp.attrs["num_samples"])
# store list of filtered keys under mask group
k = "mask/{}".format(key_name)
if k in f:
del f[k]
f[k] = np.array(demo_keys, dtype='S')
f.close()
return ep_lengths
def get_demos_for_filter_key(hdf5_path, filter_key):
"""
Gets demo keys that correspond to a particular filter key.
Args:
hdf5_path (str): path to hdf5 file
filter_key (str): name of filter key
Returns:
demo_keys ([str]): list of demonstration keys that
correspond to this filter key. For example, ["demo_0",
"demo_1"].
"""
f = h5py.File(hdf5_path, "r")
demo_keys = [elem.decode("utf-8") for elem in np.array(f["mask/{}".format(filter_key)][:])]
f.close()
return demo_keys
def get_env_metadata_from_dataset(dataset_path, ds_format="robomimic", set_env_specific_obs_processors=True):
"""
Retrieves env metadata from dataset.
Args:
dataset_path (str): path to dataset
set_env_specific_obs_processors (bool): environment might have custom rules for how to process
observations - if this flag is true, make sure ObsUtils will use these custom settings. This
is a good place to do this operation to make sure it happens before loading data, running a
trained model, etc.
Returns:
env_meta (dict): environment metadata. Contains 3 keys:
:`'env_name'`: name of environment
:`'type'`: type of environment, should be a value in EB.EnvType
:`'env_kwargs'`: dictionary of keyword arguments to pass to environment constructor
"""
dataset_path = os.path.expandvars(os.path.expanduser(dataset_path))
f = h5py.File(dataset_path, "r")
if ds_format == "robomimic":
env_meta = json.loads(f["data"].attrs["env_args"])
elif ds_format == "r2d2":
env_meta = dict(f.attrs)
else:
raise ValueError
f.close()
if set_env_specific_obs_processors:
# handle env-specific custom observation processing logic
EnvUtils.set_env_specific_obs_processing(env_meta=env_meta)
return env_meta
def get_shape_metadata_from_dataset(dataset_path, action_keys, all_obs_keys=None, ds_format="robomimic", verbose=False):
"""
Retrieves shape metadata from dataset.
Args:
dataset_path (str): path to dataset
action_keys (list): list of all action key strings
all_obs_keys (list): list of all modalities used by the model. If not provided, all modalities
present in the file are used.
verbose (bool): if True, include print statements
Returns:
shape_meta (dict): shape metadata. Contains the following keys:
:`'ac_dim'`: action space dimension
:`'all_shapes'`: dictionary that maps observation key string to shape
:`'all_obs_keys'`: list of all observation modalities used
:`'use_images'`: bool, whether or not image modalities are present
:`'use_depths'`: bool, whether or not depth modalities are present
"""
shape_meta = {}
# read demo file for some metadata
dataset_path = os.path.expandvars(os.path.expanduser(dataset_path))
f = h5py.File(dataset_path, "r")
if ds_format == "robomimic":
demo_id = list(f["data"].keys())[0]
demo = f["data/{}".format(demo_id)]
for key in action_keys:
assert len(demo[key].shape) == 2 # shape should be (B, D)
action_dim = sum([demo[key].shape[1] for key in action_keys])
shape_meta["ac_dim"] = action_dim
# observation dimensions
all_shapes = OrderedDict()
if all_obs_keys is None:
# use all modalities present in the file
all_obs_keys = [k for k in demo["obs"]]
for k in sorted(all_obs_keys):
initial_shape = demo["obs/{}".format(k)].shape[1:]
if verbose:
print("obs key {} with shape {}".format(k, initial_shape))
# Store processed shape for each obs key
all_shapes[k] = ObsUtils.get_processed_shape(
obs_modality=ObsUtils.OBS_KEYS_TO_MODALITIES[k],
input_shape=initial_shape,
)
elif ds_format == "r2d2":
for key in action_keys:
assert len(f[key].shape) == 2 # shape should be (B, D)
action_dim = sum([f[key].shape[1] for key in action_keys])
shape_meta["ac_dim"] = action_dim
# observation dimensions
all_shapes = OrderedDict()
# hack all relevant obs shapes for now
for k in [
"robot_state/cartesian_position",
"robot_state/gripper_position",
"robot_state/joint_positions",
"camera/image/hand_camera_image",
"camera/image/varied_camera_1_image",
"camera/image/varied_camera_2_image",
]:
initial_shape = f["observation/{}".format(k)].shape[1:]
if len(initial_shape) == 0:
initial_shape = (1,)
all_shapes[k] = ObsUtils.get_processed_shape(
obs_modality=ObsUtils.OBS_KEYS_TO_MODALITIES[k],
input_shape=initial_shape,
)
else:
raise ValueError
f.close()
shape_meta['all_shapes'] = all_shapes
shape_meta['all_obs_keys'] = all_obs_keys
shape_meta['use_images'] = ObsUtils.has_modality("rgb", all_obs_keys)
shape_meta['use_depths'] = ObsUtils.has_modality("depth", all_obs_keys)
return shape_meta
def get_intervention_segments(interventions):
"""
Splits interventions list into a list of start and end indices (windows) of continuous intervention segments.
"""
interventions = interventions.reshape(-1).astype(int)
# pad before and after to make it easy to count starting and ending intervention segments
expanded_ints = [False] + interventions.astype(bool).tolist() + [False]
start_inds = []
end_inds = []
for i in range(1, len(expanded_ints)):
if expanded_ints[i] and (not expanded_ints[i - 1]):
# low to high edge means start of new window
start_inds.append(i - 1) # record index in original array which is one less (since we added an element to the beg)
elif (not expanded_ints[i]) and expanded_ints[i - 1]:
# high to low edge means end of previous window
end_inds.append(i - 1) # record index in original array which is one less (since we added an element to the beg)
# run some sanity checks
assert len(start_inds) == len(end_inds), "missing window edge"
assert np.all([np.sum(interventions[s : e]) == (e - s) for s, e in zip(start_inds, end_inds)]), "window computation covers non-interventions"
assert sum([np.sum(interventions[s : e]) for s, e in zip(start_inds, end_inds)]) == np.sum(interventions), "window computation does not cover all interventions"
return list(zip(start_inds, end_inds))
def load_dict_from_checkpoint(ckpt_path):
"""
Load checkpoint dictionary from a checkpoint file.
Args:
ckpt_path (str): Path to checkpoint file.
Returns:
ckpt_dict (dict): Loaded checkpoint dictionary.
"""
ckpt_path = os.path.expandvars(os.path.expanduser(ckpt_path))
if not torch.cuda.is_available():
ckpt_dict = torch.load(ckpt_path, map_location=lambda storage, loc: storage)
else:
ckpt_dict = torch.load(ckpt_path)
return ckpt_dict
def maybe_dict_from_checkpoint(ckpt_path=None, ckpt_dict=None):
"""
Utility function for the common use case where either an ckpt path
or a ckpt_dict is provided. This is a no-op if ckpt_dict is not
None, otherwise it loads the model dict from the ckpt path.
Args:
ckpt_path (str): Path to checkpoint file. Only needed if not providing @ckpt_dict.
ckpt_dict(dict): Loaded model checkpoint dictionary. Only needed if not providing @ckpt_path.
Returns:
ckpt_dict (dict): Loaded checkpoint dictionary.
"""
assert (ckpt_path is not None) or (ckpt_dict is not None)
if ckpt_dict is None:
ckpt_dict = load_dict_from_checkpoint(ckpt_path)
return ckpt_dict
def algo_name_from_checkpoint(ckpt_path=None, ckpt_dict=None):
"""
Return algorithm name that was used to train a checkpoint or
loaded model dictionary.
Args:
ckpt_path (str): Path to checkpoint file. Only needed if not providing @ckpt_dict.
ckpt_dict(dict): Loaded model checkpoint dictionary. Only needed if not providing @ckpt_path.
Returns:
algo_name (str): algorithm name
ckpt_dict (dict): loaded checkpoint dictionary (convenient to avoid
re-loading checkpoint from disk multiple times)
"""
ckpt_dict = maybe_dict_from_checkpoint(ckpt_path=ckpt_path, ckpt_dict=ckpt_dict)
algo_name = ckpt_dict["algo_name"]
return algo_name, ckpt_dict
def update_config(cfg):
"""
Updates the config for backwards-compatibility if it uses outdated configurations.
See https://github.com/ARISE-Initiative/robomimic/releases/tag/v0.2.0 for more info.
Args:
cfg (dict): Raw dictionary of config values
"""
# Check if image modality is defined -- this means we're using an outdated config
# Note: There may be a nested hierarchy, so we possibly check all the nested obs cfgs which can include
# e.g. a planner and actor for HBC
def find_obs_dicts_recursively(dic):
dics = []
if "modalities" in dic:
dics.append(dic)
else:
for child_dic in dic.values():
dics += find_obs_dicts_recursively(child_dic)
return dics
obs_cfgs = find_obs_dicts_recursively(cfg["observation"])
for obs_cfg in obs_cfgs:
modalities = obs_cfg["modalities"]
found_img = False
for modality_group in ("obs", "subgoal", "goal"):
if modality_group in modalities:
img_modality = modalities[modality_group].pop("image", None)
if img_modality is not None:
found_img = True
modalities[modality_group]["rgb"] = img_modality
if found_img:
# Also need to map encoder kwargs correctly
old_encoder_cfg = obs_cfg.pop("encoder")
# Create new encoder entry for RGB
rgb_encoder_cfg = {
"core_class": "VisualCore",
"core_kwargs": {
"backbone_kwargs": dict(),
"pool_kwargs": dict(),
},
"obs_randomizer_class": None,
"obs_randomizer_kwargs": dict(),
}
if "visual_feature_dimension" in old_encoder_cfg:
rgb_encoder_cfg["core_kwargs"]["feature_dimension"] = old_encoder_cfg["visual_feature_dimension"]
if "visual_core" in old_encoder_cfg:
rgb_encoder_cfg["core_kwargs"]["backbone_class"] = old_encoder_cfg["visual_core"]
for kwarg in ("pretrained", "input_coord_conv"):
if "visual_core_kwargs" in old_encoder_cfg and kwarg in old_encoder_cfg["visual_core_kwargs"]:
rgb_encoder_cfg["core_kwargs"]["backbone_kwargs"][kwarg] = old_encoder_cfg["visual_core_kwargs"][kwarg]
# Optionally add pooling info too
if old_encoder_cfg.get("use_spatial_softmax", True):
rgb_encoder_cfg["core_kwargs"]["pool_class"] = "SpatialSoftmax"
for kwarg in ("num_kp", "learnable_temperature", "temperature", "noise_std"):
if "spatial_softmax_kwargs" in old_encoder_cfg and kwarg in old_encoder_cfg["spatial_softmax_kwargs"]:
rgb_encoder_cfg["core_kwargs"]["pool_kwargs"][kwarg] = old_encoder_cfg["spatial_softmax_kwargs"][kwarg]
# Update obs randomizer as well
for kwarg in ("obs_randomizer_class", "obs_randomizer_kwargs"):
if kwarg in old_encoder_cfg:
rgb_encoder_cfg[kwarg] = old_encoder_cfg[kwarg]
# Store rgb config
obs_cfg["encoder"] = {"rgb": rgb_encoder_cfg}
# Also add defaults for low dim
obs_cfg["encoder"]["low_dim"] = {
"core_class": None,
"core_kwargs": {
"backbone_kwargs": dict(),
"pool_kwargs": dict(),
},
"obs_randomizer_class": None,
"obs_randomizer_kwargs": dict(),
}
def config_from_checkpoint(algo_name=None, ckpt_path=None, ckpt_dict=None, verbose=False):
"""
Helper function to restore config from a checkpoint file or loaded model dictionary.
Args:
algo_name (str): Algorithm name.
ckpt_path (str): Path to checkpoint file. Only needed if not providing @ckpt_dict.
ckpt_dict(dict): Loaded model checkpoint dictionary. Only needed if not providing @ckpt_path.
verbose (bool): if True, include print statements
Returns:
config (dict): Raw loaded configuration, without properties replaced.
ckpt_dict (dict): loaded checkpoint dictionary (convenient to avoid
re-loading checkpoint from disk multiple times)
"""
ckpt_dict = maybe_dict_from_checkpoint(ckpt_path=ckpt_path, ckpt_dict=ckpt_dict)
if algo_name is None:
algo_name, _ = algo_name_from_checkpoint(ckpt_dict=ckpt_dict)
# restore config from loaded model dictionary
config_dict = json.loads(ckpt_dict['config'])
update_config(cfg=config_dict)
if verbose:
print("============= Loaded Config =============")
print(json.dumps(config_dict, indent=4))
config = config_factory(algo_name, dic=config_dict)
# lock config to prevent further modifications and ensure missing keys raise errors
config.lock()
return config, ckpt_dict
def policy_from_checkpoint(device=None, ckpt_path=None, ckpt_dict=None, verbose=False):
"""
This function restores a trained policy from a checkpoint file or
loaded model dictionary.
Args:
device (torch.device): if provided, put model on this device
ckpt_path (str): Path to checkpoint file. Only needed if not providing @ckpt_dict.
ckpt_dict(dict): Loaded model checkpoint dictionary. Only needed if not providing @ckpt_path.
verbose (bool): if True, include print statements
Returns:
model (RolloutPolicy): instance of Algo that has the saved weights from
the checkpoint file, and also acts as a policy that can easily
interact with an environment in a training loop
ckpt_dict (dict): loaded checkpoint dictionary (convenient to avoid
re-loading checkpoint from disk multiple times)
"""
ckpt_dict = maybe_dict_from_checkpoint(ckpt_path=ckpt_path, ckpt_dict=ckpt_dict)
# algo name and config from model dict
algo_name, _ = algo_name_from_checkpoint(ckpt_dict=ckpt_dict)
config, _ = config_from_checkpoint(algo_name=algo_name, ckpt_dict=ckpt_dict, verbose=verbose)
# read config to set up metadata for observation modalities (e.g. detecting rgb observations)
ObsUtils.initialize_obs_utils_with_config(config)
# shape meta from model dict to get info needed to create model
shape_meta = ckpt_dict["shape_metadata"]
# maybe restore observation normalization stats
obs_normalization_stats = ckpt_dict.get("obs_normalization_stats", None)
if obs_normalization_stats is not None:
assert config.train.hdf5_normalize_obs
for m in obs_normalization_stats:
for k in obs_normalization_stats[m]:
obs_normalization_stats[m][k] = np.array(obs_normalization_stats[m][k])
# maybe restore action normalization stats
action_normalization_stats = ckpt_dict.get("action_normalization_stats", None)
if action_normalization_stats is not None:
for m in action_normalization_stats:
for k in action_normalization_stats[m]:
action_normalization_stats[m][k] = np.array(action_normalization_stats[m][k])
if device is None:
# get torch device
device = TorchUtils.get_torch_device(try_to_use_cuda=config.train.cuda)
# create model and load weights
model = algo_factory(
algo_name,
config,
obs_key_shapes=shape_meta["all_shapes"],
ac_dim=shape_meta["ac_dim"],
device=device,
)
model.deserialize(ckpt_dict["model"])
model.set_eval()
model = RolloutPolicy(
model,
obs_normalization_stats=obs_normalization_stats,
action_normalization_stats=action_normalization_stats
)
if verbose:
print("============= Loaded Policy =============")
print(model)
return model, ckpt_dict
def env_from_checkpoint(ckpt_path=None, ckpt_dict=None, env_name=None, render=False, render_offscreen=False, verbose=False):
"""
Creates an environment using the metadata saved in a checkpoint.
Args:
ckpt_path (str): Path to checkpoint file. Only needed if not providing @ckpt_dict.
ckpt_dict(dict): Loaded model checkpoint dictionary. Only needed if not providing @ckpt_path.
env_name (str): if provided, override environment name saved in checkpoint
render (bool): if True, environment supports on-screen rendering
render_offscreen (bool): if True, environment supports off-screen rendering. This
is forced to be True if saved model uses image observations.
Returns:
env (EnvBase instance): environment created using checkpoint
ckpt_dict (dict): loaded checkpoint dictionary (convenient to avoid
re-loading checkpoint from disk multiple times)
"""
ckpt_dict = maybe_dict_from_checkpoint(ckpt_path=ckpt_path, ckpt_dict=ckpt_dict)
# metadata from model dict to get info needed to create environment
env_meta = ckpt_dict["env_metadata"]
shape_meta = ckpt_dict["shape_metadata"]
# create env from saved metadata
env = EnvUtils.create_env_from_metadata(
env_meta=env_meta,
env_name=env_name,
render=render,
render_offscreen=render_offscreen,
use_image_obs=shape_meta.get("use_images", False),
use_depth_obs=shape_meta.get("use_depths", False),
)
config, _ = config_from_checkpoint(algo_name=ckpt_dict["algo_name"], ckpt_dict=ckpt_dict, verbose=False)
env = EnvUtils.wrap_env_from_config(env, config=config) # apply environment wrapper, if applicable
if verbose:
print("============= Loaded Environment =============")
print(env)
return env, ckpt_dict
class DownloadProgressBar(tqdm):
def update_to(self, b=1, bsize=1, tsize=None):
if tsize is not None:
self.total = tsize
self.update(b * bsize - self.n)
def url_is_alive(url):
"""
Checks that a given URL is reachable.
From https://gist.github.com/dehowell/884204.
Args:
url (str): url string
Returns:
is_alive (bool): True if url is reachable, False otherwise
"""
request = urllib.request.Request(url)
request.get_method = lambda: 'HEAD'
try:
urllib.request.urlopen(request)
return True
except urllib.request.HTTPError:
return False
def download_url(url, download_dir, check_overwrite=True):
"""
First checks that @url is reachable, then downloads the file
at that url into the directory specified by @download_dir.
Prints a progress bar during the download using tqdm.
Modified from https://github.com/tqdm/tqdm#hooks-and-callbacks, and
https://stackoverflow.com/a/53877507.
Args:
url (str): url string
download_dir (str): path to directory where file should be downloaded
check_overwrite (bool): if True, will sanity check the download fpath to make sure a file of that name
doesn't already exist there
"""
# check if url is reachable. We need the sleep to make sure server doesn't reject subsequent requests
assert url_is_alive(url), "@download_url got unreachable url: {}".format(url)
time.sleep(0.5)
# infer filename from url link
fname = url.split("/")[-1]
file_to_write = os.path.join(download_dir, fname)
# If we're checking overwrite and the path already exists,
# we ask the user to verify that they want to overwrite the file
if check_overwrite and os.path.exists(file_to_write):
user_response = input(f"Warning: file {file_to_write} already exists. Overwrite? y/n\n")
assert user_response.lower() in {"yes", "y"}, f"Did not receive confirmation. Aborting download."
with DownloadProgressBar(unit='B', unit_scale=True,
miniters=1, desc=fname) as t:
urllib.request.urlretrieve(url, filename=file_to_write, reporthook=t.update_to)
def find_and_replace_path_prefix(org_path, replace_prefixes, new_prefix, assert_replace=False):
"""
Try to find and replace one of several prefixes (@replace_prefixes) in string @org_path
with another prefix (@new_prefix). If @assert_replace is True, the function asserts that
replacement did occur.
"""
check_ind = -1
for i, x in enumerate(replace_prefixes):
if org_path.startswith(x):
check_ind = i
if assert_replace:
assert check_ind != -1
if check_ind == -1:
return org_path
replace_prefix = replace_prefixes[check_ind]
return org_path.replace(replace_prefix, new_prefix, 1)