update reqs.txt

app.ipynb

@@ -97,16 +97,41 @@
   },
   {
    "cell_type": "code",
-   "execution_count": null,
+   "execution_count": 5,
    "metadata": {},
-   "outputs": [],
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "tensor([[ 1, 15, 15, 15, 15,  2, 16,  3, 15,  5, 15, 12,  2, 13,  1,  3,  4,  1,\n",
+       "         10,  2,  6, 15, 15, 15, 15,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,\n",
+       "          0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0],\n",
+       "        [ 5,  5,  7,  7,  8,  5, 15,  6,  8, 18,  7, 18,  6,  9, 17,  8,  7,  9,\n",
+       "         10, 18, 17,  6, 17,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,\n",
+       "          0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0],\n",
+       "        [ 6, 10, 15,  9, 15, 10, 15,  9,  5, 15, 12,  9,  8,  9,  4,  9, 10,  9,\n",
+       "          9,  8,  6, 14,  9,  8, 14,  6,  5, 18, 13,  9, 10,  1, 13, 15, 17,  3,\n",
+       "         20,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0],\n",
+       "        [ 5, 10,  6,  1, 10, 19, 12, 18,  1,  9, 16, 18,  5,  0,  0,  0,  0,  0,\n",
+       "          0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,\n",
+       "          0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0],\n",
+       "        [ 9,  8,  9, 16,  2, 20, 20, 10, 13,  2,  5, 18, 17, 16,  0,  0,  0,  0,\n",
+       "          0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,\n",
+       "          0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0,  0]])"
+      ]
+     },
+     "execution_count": 5,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
    "source": [
     "seqs"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 25,
+   "execution_count": 6,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -185,7 +210,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 26,
+   "execution_count": 7,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -204,7 +229,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 27,
+   "execution_count": 8,
    "metadata": {},
    "outputs": [
     {
@@ -234,7 +259,7 @@
        "  'ADP: 0.5862, BBP: 0.5636, ACP: 0.5271, AHP: 0.5266, AIP: 0.5244, AAP: 0.5149, DPPIP: 0.5111, QSP: 0.5093, APP: 0.5074']]"
       ]
      },
-     "execution_count": 27,
+     "execution_count": 8,
      "metadata": {},
      "output_type": "execute_result"
     }

requirements.txt

@@ -2,6 +2,6 @@ torch
 numpy
 biopython
 transformers
-gradio
+gradio==3.30.0
 Bio
 fair-esm