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Update app.py
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app.py
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import gradio as gr
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import tensorflow as tf
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from tensorflow.keras.models import load_model
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from
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import numpy as np
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from PIL import Image
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import os
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from huggingface_hub import hf_hub_download
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#
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if not os.path.exists(MODEL_PATH):
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print("Downloading model...")
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hf_hub_download(
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repo_id="yolac/BacterialMorphologyClassification",
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filename="model.keras",
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local_dir="./",
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)
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# Load the model
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print("Loading model...")
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model = load_model(MODEL_PATH)
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# Define class labels
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class_labels = ["Cocci", "Bacilli", "Spirilla"]
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# Preprocessing function
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def preprocess_image(image):
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image = image.resize((224, 224)) #
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return image
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# Prediction function
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def
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predictions = model.predict(
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return f"
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# Gradio
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title = "Bacterial Morphology Classifier"
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description = (
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"Upload an image of bacteria, and the model will classify it into one of three types: "
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"**Cocci**, **Bacilli**, or **Spirilla**."
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)
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interface = gr.Interface(
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fn=
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inputs=gr.Image(type="pil"),
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outputs="text",
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title=
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description=
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examples=[
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["https://huggingface.co/datasets/yolac/BacterialMorphologyClassification/resolve/main/img%20290.jpg"],
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["https://huggingface.co/datasets/yolac/BacterialMorphologyClassification/resolve/main/img%20565.jpg"],
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["https://huggingface.co/datasets/yolac/BacterialMorphologyClassification/resolve/main/img%208.jpg"]
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],
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)
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if __name__ == "__main__":
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interface.launch()
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import gradio as gr
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from tensorflow.keras.models import load_model
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from huggingface_hub import hf_hub_download
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import numpy as np
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from PIL import Image
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# Define constants
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MODEL_REPO = "yolac/BacterialMorphologyClassification"
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MODEL_FILENAME = "model.keras"
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MODEL_PATH = hf_hub_download(repo_id=MODEL_REPO, filename=MODEL_FILENAME)
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# Load the model
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print("Loading model...")
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model = load_model(MODEL_PATH)
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# Preprocessing function
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def preprocess_image(image):
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image = image.resize((224, 224)) # Adjust size as per your model input
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image_array = np.array(image) / 255.0 # Normalize to [0, 1]
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image_array = np.expand_dims(image_array, axis=0) # Add batch dimension
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return image_array
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# Prediction function
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def predict(image):
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image_array = preprocess_image(image)
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predictions = model.predict(image_array)
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class_names = ["Cocci", "Bacilli", "Spirilla"]
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predicted_class = class_names[np.argmax(predictions)]
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return f"Predicted Class: {predicted_class}"
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# Gradio Interface
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interface = gr.Interface(
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fn=predict,
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inputs=gr.Image(type="pil"),
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outputs="text",
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title="Bacterial Morphology Classification",
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description="Upload an image of bacteria to classify as Cocci, Bacilli, or Spirilla."
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)
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# Launch the app
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if __name__ == "__main__":
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interface.launch()
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