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environment.yaml

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+name: economy
+channels:
+  - pytorch
+  - bioconda
+  - conda-forge
+  - defaults
+dependencies:
+  - _libgcc_mutex=0.1=main
+  - _openmp_mutex=4.5=3_kmp_llvm
+  - _sysroot_linux-64_curr_repodata_hack=3=haa98f57_10
+  - aiofiles=22.1.0=py39h06a4308_0
+  - anndata=0.10.9=pyhd8ed1ab_0
+  - arpack=3.9.1=nompi_hf03ea27_102
+  - array-api-compat=1.11.2=pyh29332c3_0
+  - bedtools=2.31.1=h13024bc_3
+  - binutils_impl_linux-64=2.40=h5293946_0
+  - binutils_linux-64=2.40.0=hc2dff05_2
+  - blas=1.0=mkl
+  - bottleneck=1.4.2=py39ha9d4c09_0
+  - brotli-python=1.0.9=py39h6a678d5_9
+  - bzip2=1.0.8=h5eee18b_6
+  - c-ares=1.34.5=hb9d3cd8_0
+  - ca-certificates=2025.2.25=h06a4308_0
+  - cached-property=1.5.2=py_0
+  - contourpy=1.2.1=py39hdb19cb5_1
+  - cuda-cccl_linux-64=12.8.90=ha770c72_1
+  - cuda-crt-dev_linux-64=12.8.93=ha770c72_3
+  - cuda-crt-tools=12.8.93=ha770c72_3
+  - cuda-cudart=12.8.90=h5888daf_1
+  - cuda-cudart-dev=12.8.90=h5888daf_1
+  - cuda-cudart-dev_linux-64=12.8.90=h3f2d84a_1
+  - cuda-cudart-static=12.8.90=h5888daf_1
+  - cuda-cudart-static_linux-64=12.8.90=h3f2d84a_1
+  - cuda-cudart_linux-64=12.8.90=h3f2d84a_1
+  - cuda-cuobjdump=12.8.90=hbd13f7d_1
+  - cuda-cupti=12.8.90=h5888daf_1
+  - cuda-driver-dev_linux-64=12.8.90=h3f2d84a_1
+  - cuda-nvcc=12.8.93=hcdd1206_1
+  - cuda-nvcc-dev_linux-64=12.8.93=he91c749_3
+  - cuda-nvcc-impl=12.8.93=h85509e4_3
+  - cuda-nvcc-tools=12.8.93=he02047a_3
+  - cuda-nvcc_linux-64=12.8.93=h04802cd_1
+  - cuda-nvdisasm=12.8.90=hbd13f7d_1
+  - cuda-nvrtc=12.8.93=h5888daf_1
+  - cuda-nvtx=12.8.90=h5888daf_1
+  - cuda-nvvm-dev_linux-64=12.8.93=ha770c72_3
+  - cuda-nvvm-impl=12.8.93=he02047a_3
+  - cuda-nvvm-tools=12.8.93=he02047a_3
+  - cuda-version=12.8=h5d125a7_3
+  - cudnn=9.8.0.87=h81d5506_1
+  - cycler=0.11.0=pyhd3eb1b0_0
+  - cython=3.0.11=py39h5eee18b_1
+  - deprecated=1.2.13=py39h06a4308_0
+  - exceptiongroup=1.2.2=pyhd8ed1ab_1
+  - filelock=3.17.0=py39h06a4308_0
+  - fonttools=4.55.3=py39h5eee18b_0
+  - freetype=2.13.3=h48d6fc4_0
+  - fsspec=2024.12.0=py39h06a4308_0
+  - gcc_impl_linux-64=11.2.0=h1234567_1
+  - gcc_linux-64=11.2.0=h5c386dc_2
+  - get-annotations=0.1.2=pyhd8ed1ab_0
+  - glpk=5.0=h445213a_0
+  - gmp=6.3.0=h6a678d5_0
+  - gmpy2=2.2.1=py39h5eee18b_0
+  - gxx_impl_linux-64=11.2.0=h1234567_1
+  - gxx_linux-64=11.2.0=hc2dff05_2
+  - h5py=3.13.0=nompi_py39h30a5a8d_100
+  - hdf5=1.14.3=nompi_h2d575fe_109
+  - icu=75.1=he02047a_0
+  - ignite=0.5.2=py_0
+  - igraph=0.10.15=he44f51b_1
+  - importlib-metadata=8.5.0=py39h06a4308_0
+  - importlib_resources=6.4.0=py39h06a4308_0
+  - intel-openmp=2025.0.0=h06a4308_1171
+  - jinja2=3.1.6=py39h06a4308_0
+  - joblib=1.4.2=py39h06a4308_0
+  - kernel-headers_linux-64=3.10.0=h57e8cba_10
+  - kiwisolver=1.4.4=py39h6a678d5_0
+  - krb5=1.21.3=h143b758_0
+  - lcms2=2.17=h717163a_0
+  - ld_impl_linux-64=2.40=h12ee557_0
+  - legacy-api-wrap=1.4=pyhd8ed1ab_1
+  - leidenalg=0.10.2=py39h3d6467e_0
+  - lerc=4.0.0=h6a678d5_0
+  - libabseil=20240722.0=cxx17_hbbce691_4
+  - libaec=1.1.3=h6a678d5_0
+  - libblas=3.9.0=20_linux64_mkl
+  - libcblas=3.9.0=20_linux64_mkl
+  - libcublas=12.8.4.1=h9ab20c4_1
+  - libcufft=11.3.3.83=h5888daf_1
+  - libcurand=10.3.9.90=h9ab20c4_1
+  - libcurl=8.13.0=h332b0f4_0
+  - libcusolver=11.7.3.90=h9ab20c4_1
+  - libcusparse=12.5.8.93=h5888daf_1
+  - libdeflate=1.22=h5eee18b_0
+  - libedit=3.1.20230828=h5eee18b_0
+  - libev=4.33=hd590300_2
+  - libffi=3.4.4=h6a678d5_1
+  - libgcc=14.2.0=h767d61c_2
+  - libgcc-devel_linux-64=11.2.0=h1234567_1
+  - libgcc-ng=14.2.0=h69a702a_2
+  - libgfortran=14.2.0=h69a702a_2
+  - libgfortran-ng=14.2.0=h69a702a_2
+  - libgfortran5=14.2.0=hf1ad2bd_2
+  - libgomp=14.2.0=h767d61c_2
+  - libiconv=1.18=h4ce23a2_1
+  - libjpeg-turbo=3.0.3=h5eee18b_0
+  - liblapack=3.9.0=20_linux64_mkl
+  - libleidenalg=0.11.1=h00ab1b0_0
+  - libllvm14=14.0.6=hcd5def8_4
+  - libllvm19=19.1.7=ha7bfdaf_1
+  - libllvm20=20.1.2=ha7bfdaf_0
+  - liblzma=5.8.1=hb9d3cd8_0
+  - libmagma=2.8.0=h566cb83_2
+  - libmagma_sparse=2.8.0=h0af6554_0
+  - libmlir19=19.1.7=hdb19cb5_0
+  - libnghttp2=1.64.0=h161d5f1_0
+  - libnsl=2.0.1=hd590300_0
+  - libnvjitlink=12.8.93=h5888daf_1
+  - libpng=1.6.47=h943b412_0
+  - libprotobuf=5.28.2=h5b01275_0
+  - libsqlite=3.49.1=hee588c1_2
+  - libssh2=1.11.1=hf672d98_0
+  - libstdcxx=14.2.0=h8f9b012_2
+  - libstdcxx-devel_linux-64=11.2.0=h1234567_1
+  - libstdcxx-ng=14.2.0=h4852527_2
+  - libtiff=4.7.0=hc4654cb_2
+  - libtorch=2.5.1=cuda126_h5a272cc_302
+  - libuuid=2.38.1=h0b41bf4_0
+  - libuv=1.50.0=hb9d3cd8_0
+  - libwebp-base=1.5.0=h851e524_0
+  - libxcb=1.17.0=h8a09558_0
+  - libxcrypt=4.4.36=hd590300_1
+  - libxml2=2.13.7=h4bc477f_1
+  - libzlib=1.3.1=hb9d3cd8_2
+  - lit=19.1.7=py39h06a4308_1
+  - llvm-openmp=20.1.2=h024ca30_0
+  - llvmlite=0.43.0=py39h6a678d5_1
+  - lz4-c=1.9.4=h6a678d5_1
+  - magma=2.8.0=h51420fd_0
+  - markupsafe=3.0.2=py39h5eee18b_0
+  - matplotlib-base=3.9.2=py39hbfdbfaf_1
+  - mkl=2023.2.0=h84fe81f_50496
+  - mkl-service=2.4.0=py39h5eee18b_2
+  - mkl_fft=1.3.11=py39h5eee18b_0
+  - mkl_random=1.2.8=py39h1128e8f_0
+  - mpc=1.3.1=h5eee18b_0
+  - mpfr=4.2.1=h5eee18b_0
+  - mpmath=1.3.0=py39h06a4308_0
+  - natsort=8.4.0=pyh29332c3_1
+  - nccl=2.26.2.1=ha44e49d_1
+  - ncurses=6.4=h6a678d5_0
+  - networkx=3.2.1=py39h06a4308_0
+  - numba=0.60.0=py39h0320e7d_0
+  - numexpr=2.10.1=py39h3c60e43_0
+  - openjpeg=2.5.3=h5fbd93e_0
+  - openssl=3.5.0=h7b32b05_0
+  - opentelemetry-api=1.30.0=py39h06a4308_0
+  - packaging=24.2=pyhd8ed1ab_2
+  - pandas=2.2.3=py39h6a678d5_0
+  - patsy=1.0.1=py39h06a4308_0
+  - pillow=11.1.0=py39h15c0740_0
+  - pthread-stubs=0.3=h0ce48e5_1
+  - pybedtools=0.12.0=py39h475c85d_0
+  - pybind11-abi=4=hd3eb1b0_1
+  - pydantic=1.8.2=py39h5eee18b_1
+  - pynndescent=0.5.4=pyhd3eb1b0_0
+  - pyparsing=3.2.0=py39h06a4308_0
+  - pysam=0.23.0=py39hdd5828d_0
+  - python=3.9.18=h0755675_1_cpython
+  - python-dateutil=2.9.0post0=py39h06a4308_2
+  - python-igraph=0.11.8=py39hb479397_0
+  - python-multipart=0.0.20=py39h06a4308_0
+  - python-tzdata=2023.3=pyhd3eb1b0_0
+  - python_abi=3.9=6_cp39
+  - pytorch=2.5.1=cuda126_py39hfe5c751_302
+  - pytz=2024.1=py39h06a4308_0
+  - pyyaml=6.0.2=py39h5eee18b_0
+  - readline=8.2=h5eee18b_0
+  - scanpy=1.10.3=pyhd8ed1ab_0
+  - scikit-learn=1.6.1=py39h6a678d5_0
+  - scipy=1.13.1=py39h5f9d8c6_1
+  - seaborn=0.13.2=py39h06a4308_2
+  - session-info=1.0.0=pyhd8ed1ab_0
+  - six=1.17.0=py39h06a4308_0
+  - sleef=3.8=h1b44611_0
+  - sparse=0.15.5=pyh72ffeb9_0
+  - sqlite=3.31.1=h7b6447c_0
+  - statsmodels=0.14.4=py39h5eee18b_0
+  - stdlib-list=0.10.0=py39h06a4308_0
+  - sympy=1.13.3=py39h06a4308_1
+  - sysroot_linux-64=2.17=h57e8cba_10
+  - tbb=2021.8.0=hdb19cb5_0
+  - texttable=1.7.0=pyhd8ed1ab_1
+  - threadpoolctl=3.5.0=py39h2f386ee_0
+  - tk=8.6.13=noxft_h4845f30_101
+  - tqdm=4.67.1=py39h2f386ee_0
+  - triton=3.2.0=cuda126py39h21886b0_1
+  - typing-extensions=4.12.2=py39h06a4308_0
+  - typing_extensions=4.12.2=py39h06a4308_0
+  - tzdata=2025a=h04d1e81_0
+  - umap-learn=0.5.7=py39hf3d152e_1
+  - unicodedata2=15.1.0=py39h5eee18b_1
+  - wheel=0.45.1=py39h06a4308_0
+  - wrapt=1.17.0=py39h5eee18b_0
+  - xorg-libxau=1.0.12=hb9d3cd8_0
+  - xorg-libxdmcp=1.1.5=hb9d3cd8_0
+  - xz=5.6.4=h5eee18b_1
+  - yaml=0.2.5=h7b6447c_0
+  - zipp=3.21.0=py39h06a4308_0
+  - zlib=1.3.1=hb9d3cd8_2
+  - zstd=1.5.7=hb8e6e7a_2
+  - pip:
+      - anyio==4.9.0
+      - click==8.1.8
+      - dill==0.3.9
+      - fastapi==0.115.12
+      - h11==0.14.0
+      - idna==3.10
+      - numpy==1.26.4
+      - nvidia-ml-py3==7.352.0
+      - parse==1.20.2
+      - pip==25.0.1
+      - setuptools==78.1.0
+      - sniffio==1.3.1
+      - starlette==0.46.1
+      - uvicorn==0.34.0
+prefix: /home/ning/anaconda3/envs/economy