#!/usr/bin/env bash
# Smoke test: protein → a few RNAs (skip motif for a fast path check).
set -euo pipefail
ROOT="$(cd "$(dirname "$0")/.." && pwd)"
cd "$ROOT"
if [[ ! -f configs/paths.env ]]; then
  echo "First run: cp configs/paths.env.example configs/paths.env and set VESM paths."
  exit 1
fi
# Short peptide is only for plumbing; use a full RBP sequence for real demos.
SEQ="${1:-MSKSLYKVL}"
python api/generate_rna_and_motif.py \
  --protein "$SEQ" \
  --p-id DemoSmoke \
  --num-sequences 8 \
  --length-bp 40 \
  --skip-motif