config.json

{
  "model_family": "AFFINose",
  "release_name": "affinose-interaction-model",
  "checkpoint": "checkpoints/affinose_interaction_model.pt",
  "vocabulary": "vocab/bpe_vocabulary.json",
  "glycan_encoder": "BERTose glycan encoder",
  "glycan_dim": 768,
  "protein_encoder": "ESM-C 300M",
  "protein_dim": 960,
  "shared_dim": 512,
  "num_heads": 8,
  "ffn_dim": 1024,
  "num_cross_layers": 2,
  "pooling_mode": "mean",
  "interaction_mode": "concat",
  "max_glycan_length": 256,
  "max_protein_length": 1024
}