config.json

{
  "version": "deeptaxa.v1.0.0",
  "model_type": "hybridcnnbert",
  "tokenizer_name": "zhihan1996/DNABERT-2-117M",
  "max_length": 512,
  "dropout_prob": 0.2,
  "total_parameters": 72635154,
  "taxonomic_levels": {
    "domain": 2,
    "phylum": 106,
    "class": 244,
    "order": 630,
    "family": 1353,
    "genus": 4798,
    "species": 10547
  },
  "training_hyperparameters": {
    "learning_rate": 0.0001,
    "batch_size": 16,
    "epochs": 10,
    "focal_gamma": 2.0,
    "level_weights": [1.0, 1.5, 2.0, 2.5, 3.0, 4.0, 5.0],
    "optimizer": "AdamW",
    "optimizer_params": {
      "lr": 0.0001,
      "betas": [0.9, 0.999],
      "weight_decay": 0.01
    }
  },
  "training_date": "2025-04-04"
}