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  ---
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- <<<<<<< HEAD
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  license: apache-2.0
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- datasets:
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- - ctheodoris/Genecorpus-30M
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- ---
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- The TDC Model Hub Transformers API is under development. In the meantime, we highly recommend using the native HF Transformers library and original Geneformer repo to run inference.
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-
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- ```python
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- # Use a pipeline as a high-level helper
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- from transformers import pipeline
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-
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- pipe = pipeline("fill-mask", model="ctheodoris/Geneformer")
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- ```
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- ```python
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- # Load model directly
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- from transformers import AutoTokenizer, AutoModelForMaskedLM
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-
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- tokenizer = AutoTokenizer.from_pretrained("ctheodoris/Geneformer")
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- model = AutoModelForMaskedLM.from_pretrained("ctheodoris/Geneformer")
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- ```
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-
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- For further details see: https://huggingface.co/ctheodoris/Geneformer
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- =======
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  datasets: ctheodoris/Genecorpus-30M
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- license: apache-2.0
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  tags:
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  - single-cell
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  - genomics
@@ -115,4 +92,3 @@ Please note that GPU resources are required for efficient usage of Geneformer. A
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  # Citations
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  - C V Theodoris#, L Xiao, A Chopra, M D Chaffin, Z R Al Sayed, M C Hill, H Mantineo, E Brydon, Z Zeng, X S Liu, P T Ellinor#. Transfer learning enables predictions in network biology. _**Nature**_, 31 May 2023. (#co-corresponding authors)
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  - H Chen*, M S Venkatesh*, J Gomez Ortega, S V Mahesh, T Nandi, R Madduri, K Pelka†, C V Theodoris†#. Quantized multi-task learning for context-specific representations of gene network dynamics. _**bioRxiv**_, 19 Aug 2024. (*co-first authors, †co-senior authors, #corresponding author)
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- >>>>>>> 09de19734bf3da83050abc74408517ba15b5b185
 
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  ---
 
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  license: apache-2.0
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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  datasets: ctheodoris/Genecorpus-30M
 
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  tags:
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  - single-cell
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  - genomics
 
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  # Citations
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  - C V Theodoris#, L Xiao, A Chopra, M D Chaffin, Z R Al Sayed, M C Hill, H Mantineo, E Brydon, Z Zeng, X S Liu, P T Ellinor#. Transfer learning enables predictions in network biology. _**Nature**_, 31 May 2023. (#co-corresponding authors)
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  - H Chen*, M S Venkatesh*, J Gomez Ortega, S V Mahesh, T Nandi, R Madduri, K Pelka†, C V Theodoris†#. Quantized multi-task learning for context-specific representations of gene network dynamics. _**bioRxiv**_, 19 Aug 2024. (*co-first authors, †co-senior authors, #corresponding author)