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tdc
/
Geneformer

Fill-Mask
Transformers
Safetensors
bert
single-cell
genomics
Model card Files Files and versions
xet
Community

Instructions to use tdc/Geneformer with libraries, inference providers, notebooks, and local apps. Follow these links to get started.

  • Libraries
  • Transformers

    How to use tdc/Geneformer with Transformers:

    # Use a pipeline as a high-level helper
    from transformers import pipeline
    
    pipe = pipeline("fill-mask", model="tdc/Geneformer")
    # Load model directly
    from transformers import AutoTokenizer, AutoModelForMaskedLM
    
    tokenizer = AutoTokenizer.from_pretrained("tdc/Geneformer")
    model = AutoModelForMaskedLM.from_pretrained("tdc/Geneformer")
  • Notebooks
  • Google Colab
  • Kaggle
Geneformer / docs /source
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  • 2 contributors
History: 1 commit
Alejandro Velez
tdc geneformer
47990ca over 1 year ago
  • _static
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  • about.rst
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  • api.rst
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  • conf.py
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  • geneformer.classifier.rst
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  • geneformer.emb_extractor.rst
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  • geneformer.in_silico_perturber.rst
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  • geneformer.in_silico_perturber_stats.rst
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  • geneformer.mtl_classifier.rst
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  • geneformer.tokenizer.rst
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  • getstarted.rst
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  • index.rst
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