File size: 29,927 Bytes
032a961 6923c51 032a961 6923c51 032a961 6923c51 032a961 6923c51 032a961 6923c51 032a961 6923c51 032a961 6923c51 032a961 6923c51 032a961 6923c51 032a961 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 | """Spiking core: LIF reservoir + reward-modulated (three-factor) readout.
Paradigm properties — no backpropagation, no gradients, no autodiff:
* Leaky integrate-and-fire (LIF) neurons with refractory periods and
homeostatic adaptive thresholds;
* Dale's law: each reservoir neuron is permanently excitatory or
inhibitory (20% inhibitory);
* Readout learning is a three-factor rule: eligibility (Hebbian pre/post
coincidence = reservoir trace x outcome) gated by a dopaminergic reward
prediction error d = r - baseline(r);
* Recurrent synapses follow a light reward-modulated STDP (trace-based),
sign-constrained to respect Dale's law;
* One simulation tick = one token (event-time, not wall-clock ms).
All weights are constructed deterministically from a seeded mulberry32 PRNG
so the TypeScript port regenerates bit-identical connectivity.
"""
from __future__ import annotations
import numpy as np
from .hashing import Mulberry32
class SpikingCore:
def __init__(
self,
d_in: int = 1024,
k_in: int = 12,
n_res: int = 512,
n_out: int = 4097, # 4096 vocab + 1 UNK column
seed: int = 20261022,
in_fanout: int = 8,
rec_fanout: int = 24,
inh_frac: float = 0.50,
lam: float = 0.85, # membrane leak
base_thr: float = 1.0,
thr_min: float = 0.4,
thr_max: float = 8.0,
refrac: int = 2, # ticks
tau_trace: float = 0.40, # reservoir spike-trace decay
w_in_scale: float = 3.0,
w_rec_scale: float = 0.25,
w_clip: float = 4.0,
eta_delta: float = 0.5, # local Rescorla-Wagner delta rate (LMS-normalized)
eta_stdp: float = 0.0015, # recurrent modulated STDP rate
eta_homeo: float = 0.002, # adaptive-threshold rate
target_rate: float = 0.06, # target per-neuron firing probability/tick
baseline_momentum: float = 0.995,
# ---- hierarchical slow area G (multi-scale cortex, v2) ----
hier: bool = True,
n_g: int = 256, # slow-area neurons
win: int = 8, # fast ticks per slow step
w_g_scale: float = 6.0, # L -> G feedforward weight scale
w_recg_scale: float = 0.15, # G recurrent scale (fixed, no STDP)
lam_g: float = 0.6, # slow-area membrane leak
tau_trace_g: float = 0.5, # slow-area spike-trace decay
target_rate_g: float = 0.10, # target firing per slow step
eta_homeo_g: float = 0.01,
eta_delta_g: float = 2.0, # slow-readout delta rate (8x fewer updates)
eta_beta: float = 0.02, # top-down gain learning rate
beta_init: float = 0.25,
beta_max: float = 2.0,
# ---- v3 (Muse): multi-timescale traces + direct input pathway ----
trace_taus: tuple = (0.4,), # reservoir trace decays; readout sees ALL banks
direct_input: bool = False, # readout also sees a decayed trace of the
# exact input-neuron pattern (ESN-standard
# [state; input] readout, omitted in v1/v2)
direct_tau: float = 0.5, # decay of the direct input trace
direct_gain: float = 1.0,
) -> None:
self.d_in, self.k_in, self.n_res, self.n_out = d_in, k_in, n_res, n_out
self.seed = seed
self.in_fanout, self.rec_fanout = in_fanout, rec_fanout
self.inh_frac = inh_frac
self.lam, self.base_thr = lam, base_thr
self.thr_min, self.thr_max = thr_min, thr_max
self.refrac = refrac
self.tau_trace = tau_trace
self.w_in_scale, self.w_rec_scale = w_in_scale, w_rec_scale
self.w_clip = w_clip
self.eta_delta, self.eta_stdp = eta_delta, eta_stdp
self.eta_homeo, self.target_rate = eta_homeo, target_rate
self.baseline_momentum = baseline_momentum
self.hier = hier
self.n_g, self.win = n_g, win
self.w_g_scale, self.w_recg_scale = w_g_scale, w_recg_scale
self.lam_g, self.tau_trace_g = lam_g, tau_trace_g
self.target_rate_g, self.eta_homeo_g = target_rate_g, eta_homeo_g
self.eta_delta_g = eta_delta_g
self.eta_beta, self.beta0, self.beta_max = eta_beta, beta_init, beta_max
# v3 structural params
self.trace_taus = tuple(float(t) for t in trace_taus)
self.direct_input = bool(direct_input)
self.direct_tau, self.direct_gain = float(direct_tau), float(direct_gain)
self.n_banks = len(self.trace_taus)
self.n_state = self.n_res * self.n_banks + (self.d_in if self.direct_input else 0)
# ------------------------------------------------ deterministic wiring
rng = Mulberry32(seed)
# Input -> reservoir: sparse fan-out per input neuron, dense storage.
self.W_in = np.zeros((d_in, n_res), dtype=np.float32)
for i in range(d_in):
for _ in range(in_fanout):
t = int(rng.next_float() * n_res)
self.W_in[i, t] += rng.next_weight(w_in_scale)
# Reservoir recurrent: sparse fan-out per source, Dale's law by source.
self.W_rec = np.zeros((n_res, n_res), dtype=np.float32)
self.inhibitory = np.zeros(n_res, dtype=np.bool_)
w_rec_max = 3.0 * w_rec_scale
for j in range(n_res):
is_inh = rng.next_float() < inh_frac
self.inhibitory[j] = is_inh
sign = -1.0 if is_inh else 1.0
for _ in range(rec_fanout):
t = int(rng.next_float() * n_res)
self.W_rec[j, t] += sign * abs(rng.next_weight(w_rec_scale))
# Keep Dale's law under plasticity:
# excitatory rows clipped to [0, w_rec_max], inhibitory to [-w_rec_max, 0]
self._rec_lo = np.where(self.inhibitory, -w_rec_max, 0.0).astype(np.float32)
self._rec_hi = np.where(self.inhibitory, 0.0, w_rec_max).astype(np.float32)
self.W_rec = np.clip(self.W_rec, self._rec_lo[:, None], self._rec_hi[:, None])
# Readout: small seeded init, learned by the three-factor rule.
rng2 = Mulberry32(seed + 1)
self.W_out = np.zeros((self.n_state, n_out), dtype=np.float32) # v3: n_state rows
# sparse-ish init: each column connected from a random 25% of neurons
for c in range(n_out):
for _ in range(n_res // 4):
r = int(rng2.next_float() * n_res)
self.W_out[r, c] += rng2.next_weight(0.05)
# ------------------------------------------ slow area G (hierarchy)
# Wired from SEPARATE PRNG streams (seed+2 / seed+3) so the fast-area
# sequences above are byte-identical to v1 — the TS port depends on
# the exact call order.
if hier:
rng3 = Mulberry32(seed + 2)
# L -> G: per fast-source fanout 2. Sign follows Dale's law of the
# PRESYNAPTIC fast neuron: excitatory cells excite G, inhibitory
# cells inhibit it (G sees the pooled fast spike volley).
self.W_inG = np.zeros((n_res, n_g), dtype=np.float32)
for i in range(n_res):
sign = -1.0 if self.inhibitory[i] else 1.0
for _ in range(2):
t = int(rng3.next_float() * n_g)
self.W_inG[i, t] += sign * abs(rng3.next_weight(w_g_scale))
# G recurrent: sparse, Dale by source, FIXED (slower areas
# plasticize slower — G plasticity lives in its readout only)
self.W_recG = np.zeros((n_g, n_g), dtype=np.float32)
g_rec_max = 3.0 * w_recg_scale
self.inhibitory_g = np.zeros(n_g, dtype=np.bool_)
for j in range(n_g):
is_inh = rng3.next_float() < 0.5
self.inhibitory_g[j] = is_inh
sign = -1.0 if is_inh else 1.0
for _ in range(8):
t = int(rng3.next_float() * n_g)
self.W_recG[j, t] += sign * abs(rng3.next_weight(w_recg_scale))
self._recg_lo = np.where(self.inhibitory_g, -g_rec_max, 0.0).astype(np.float32)
self._recg_hi = np.where(self.inhibitory_g, 0.0, g_rec_max).astype(np.float32)
self.W_recG = np.clip(self.W_recG, self._recg_lo[:, None], self._recg_hi[:, None])
# G readout: same seeded sparse init pattern as the fast readout
rng4 = Mulberry32(seed + 3)
self.W_outG = np.zeros((n_g, n_out), dtype=np.float32)
for c in range(n_out):
for _ in range(n_g // 4):
r = int(rng4.next_float() * n_g)
self.W_outG[r, c] += rng4.next_weight(0.05)
self.reset()
# ----------------------------------------------------------------- state
def reset(self) -> None:
self.v = np.zeros(self.n_res, dtype=np.float32)
self.thr = np.full(self.n_res, self.base_thr, dtype=np.float32)
self.rhat = np.full(self.n_res, self.target_rate, dtype=np.float32)
self.refr = np.zeros(self.n_res, dtype=np.int8)
self.x = np.zeros(self.n_state, dtype=np.float32) # v3: augmented readout state
self.x_prev = np.zeros(self.n_res, dtype=np.float32) # reservoir trace t-1 (STDP)
self.x_mean = np.zeros(self.n_state, dtype=np.float32)
self.x_eff = np.zeros(self.n_state, dtype=np.float32)
self._banks = np.zeros((self.n_banks, self.n_res), dtype=np.float32)
self._direct = np.zeros(self.d_in if self.direct_input else 0, dtype=np.float32)
self.s = np.zeros(self.n_res, dtype=np.float32) # last spike vector
self.baseline = 0.0
self.tick = 0
if self.hier:
self.v_G = np.zeros(self.n_g, dtype=np.float32)
self.thr_G = np.full(self.n_g, self.base_thr, dtype=np.float32)
self.rhat_G = np.full(self.n_g, self.target_rate_g, dtype=np.float32)
self.x_G = np.zeros(self.n_g, dtype=np.float32)
self.x_mean_G = np.zeros(self.n_g, dtype=np.float32)
self.s_G = np.zeros(self.n_g, dtype=np.float32)
self.win_spikes = np.zeros(self.n_res, dtype=np.float32)
self.u_slow = np.zeros(self.n_out, dtype=np.float32)
self.beta = self.beta0
# ------------------------------------------------------------- snapshots
def snapshot(self) -> dict:
"""Full dynamical state (the homeostatic scalars are LEARNED state —
thresholds and the trace mean co-adapt with the readout)."""
d = {
"v": self.v.copy(), "thr": self.thr.copy(), "rhat": self.rhat.copy(),
"refr": self.refr.copy(), "x": self.x.copy(), "x_prev": self.x_prev.copy(),
"x_mean": self.x_mean.copy(), "s": self.s.copy(), "baseline": self.baseline,
"banks": self._banks.copy(), "direct": self._direct.copy(),
}
if self.hier:
d.update({
"v_G": self.v_G.copy(), "thr_G": self.thr_G.copy(),
"rhat_G": self.rhat_G.copy(), "x_G": self.x_G.copy(),
"x_mean_G": self.x_mean_G.copy(), "s_G": self.s_G.copy(),
"win_spikes": self.win_spikes.copy(), "u_slow": self.u_slow.copy(),
"beta": self.beta,
})
return d
def restore(self, st: dict) -> None:
self.v = st["v"].copy()
self.thr = st["thr"].copy()
self.rhat = st["rhat"].copy()
self.refr = st["refr"].copy()
self.x = st["x"].copy()
self.x_prev = st["x_prev"].copy()
self.x_mean = st["x_mean"].copy()
self.s = st["s"].copy()
self.baseline = st["baseline"]
if "banks" in st:
self._banks = st["banks"].copy()
self._direct = st["direct"].copy()
else: # reconstruct banks from the composed state vector
nb = self.n_banks * self.n_res
self._banks = self.x[:nb].reshape(self.n_banks, self.n_res).copy()
if self.direct_input:
self._direct = self.x[nb:].copy()
if self.hier and "v_G" in st:
self.v_G = st["v_G"].copy()
self.thr_G = st["thr_G"].copy()
self.rhat_G = st["rhat_G"].copy()
self.x_G = st["x_G"].copy()
self.x_mean_G = st["x_mean_G"].copy()
self.s_G = st["s_G"].copy()
self.win_spikes = st["win_spikes"].copy()
self.u_slow = st["u_slow"].copy()
self.beta = st["beta"]
def reset_dynamics(self) -> None:
"""Reset transient dynamics but KEEP learned homeostatic scalars
(thresholds, rate estimates, trace mean, top-down gain) — used before
generation."""
thr, rhat, x_mean = self.thr, self.rhat, self.x_mean
if self.hier:
thr_G, rhat_G, x_mean_G, beta = self.thr_G, self.rhat_G, self.x_mean_G, self.beta
self.reset()
self.thr, self.rhat, self.x_mean = thr, rhat, x_mean
if self.hier:
self.thr_G, self.rhat_G, self.x_mean_G, self.beta = thr_G, rhat_G, x_mean_G, beta
# ------------------------------------------------------------- inference
def step(self, input_idx) -> np.ndarray:
"""Advance one tick with the given active input neurons.
Returns the post-synaptic trace ``x`` (the state used for readout).
"""
W_in, W_rec = self.W_in, self.W_rec
I = W_in[input_idx].sum(axis=0, dtype=np.float32)
I += self.s @ W_rec
v = self.lam * self.v + I
can = self.refr == 0
v[~can] = 0.0
spikes = (v >= self.thr) & can
v[spikes] = 0.0
np.subtract(self.refr, 1, out=self.refr, where=self.refr > 0)
self.refr[spikes] = self.refrac
self.v = v
self.s = spikes.astype(np.float32)
# homeostatic threshold via EMA firing-rate estimate
self.rhat += 0.02 * (self.s - self.rhat)
self.thr += self.eta_homeo * (self.rhat - self.target_rate)
np.clip(self.thr, self.thr_min, self.thr_max, out=self.thr)
# traces (v3): x_prev keeps the BANK-0 (fast) reservoir trace for STDP;
# the readout state x is the concatenation of all trace banks plus the
# direct input trace — context older than one tick survives in the
# slow banks and in the direct trace's decayed identity history.
self.x_prev = self._banks[0].copy()
for i, tau in enumerate(self.trace_taus):
if i == 0:
self._banks[i] = tau * self._banks[i] + self.s
else:
# slow banks are NORMALIZED traces (decay-weighted averages):
# a raw tau=0.95 sum would sit at ~20x the fast bank's scale
# and swamp both the readout geometry and the LMS rate.
self._banks[i] = tau * self._banks[i] + (1.0 - tau) * self.s
if self.direct_input:
self._direct *= np.float32(self.direct_tau)
np.add.at(self._direct, input_idx, np.float32(self.direct_gain))
self.x = np.concatenate([*self._banks, self._direct])
elif self.n_banks > 1:
self.x = np.concatenate([*self._banks])
else:
self.x = self._banks[0]
# slow EMA of the trace: homeostatic "synaptic scaling" analogue used
# to mean-center the readout input (kills the shared dense background
# that otherwise dominates column norms)
self.x_mean = 0.999 * self.x_mean + 0.001 * self.x
self.x_eff = self.x - self.x_mean
self.tick += 1
if self.hier:
self.win_spikes += self.s
return self.x
def scores(self, x: np.ndarray) -> np.ndarray:
"""Readout scores from a (raw) trace — centers with the EMA mean."""
return (x - self.x_mean) @ self.W_out
# ------------------------------------------------- slow area (hierarchy)
def step_G(self) -> None:
"""Advance the slow area one slow step (one window of ``win`` fast
ticks).
Input: the pooled fast-area spike volley over the window (bottom-up,
sign-preserving). Output: the cached slow readout ``u_slow``, used as
a top-down prior fused into the fast prediction with gain ``beta``.
Pure inference dynamics (homeostasis included, same regime as the
fast area); learning happens in ``learn_G``.
"""
c = self.win_spikes * np.float32(1.0 / self.win)
I = c @ self.W_inG
I += self.s_G @ self.W_recG
v = self.lam_g * self.v_G + I
spikes = v >= self.thr_G
v[spikes] = 0.0
self.v_G = v
self.s_G = spikes.astype(np.float32)
self.rhat_G += 0.05 * (self.s_G - self.rhat_G)
self.thr_G += self.eta_homeo_g * (self.rhat_G - self.target_rate_g)
np.clip(self.thr_G, self.thr_min, self.thr_max, out=self.thr_G)
self.x_G = self.tau_trace_g * self.x_G + self.s_G
self.x_mean_G = 0.999 * self.x_mean_G + 0.001 * self.x_G
self.win_spikes[:] = 0.0
self.u_slow = (self.x_G - self.x_mean_G) @ self.W_outG
def learn_G(self, target: int, d: float) -> int:
"""Delta-rule update on the SLOW readout, gated by the same dopaminergic
RPE that gates the fast one (a global neuromodulator broadcasts to both
areas — each readout computes its own local error from its own
activity). ``target`` is the majority vocabulary column of the NEXT
window. Returns 1 if the slow readout's own top prediction matches it.
"""
x_effG = self.x_G - self.x_mean_G
u = self.u_slow
V = self.n_out - 1
own_pred = int(np.argmax(u[:V]))
correct = 1 if own_pred == target else 0
nx = 1.0 / (float(x_effG @ x_effG) + 1e-6)
k = min(16, V)
act = np.argpartition(u[:V], -k)[-k:]
if target < V:
cols = np.concatenate([act, np.array([target], dtype=np.int64)])
desired = np.zeros(len(cols), dtype=np.float32)
desired[-1] = 1.0
else:
cols = act
desired = np.zeros(len(cols), dtype=np.float32)
errs = u[cols] - desired
gate = float(np.clip(1.0 + d, 0.25, 2.0))
eta = np.float32(self.eta_delta_g * gate * nx)
W = self.W_outG
W[:, cols] -= eta * errs[None, :] * x_effG[:, None]
W[:, cols] = np.clip(W[:, cols], -self.w_clip, self.w_clip)
return correct
# ------------------------------------------------------------- learning
def learn(self, pred: int, target: int, x: np.ndarray,
u: np.ndarray | None = None, active_k: int = 16) -> tuple[int, float, float]:
"""Local delta-rule readout update (Rescorla-Wagner) gated by a
dopaminergic reward-prediction error, + modulated recurrent STDP.
Each readout unit computes its OWN prediction error from its own
activity (no gradients, no chain rule, no backprop): units in the
active top-k set and the instructive target unit move their weights
to reduce (score - desired). The learning rate is gated by dopamine
d = reward - baseline (RPE), the classical Rescorla-Wagner / TD
account of neuromodulation.
Returns (correct, reward, dopamine).
"""
correct = 1 if pred == target else 0
reward = float(correct)
self.baseline = self.baseline_momentum * self.baseline + (1 - self.baseline_momentum) * reward
d = reward - self.baseline # dopaminergic RPE
W_out = self.W_out
x_eff = x - self.x_mean
nx = 1.0 / (float(x_eff @ x_eff) + 1e-6) # LMS normalization
V = self.n_out - 1
if u is None:
u = x_eff @ W_out
# active set: top-k scored columns (+ target if in vocabulary)
k = min(active_k, V)
act = np.argpartition(u[:V], -k)[-k:]
if target < V:
cols = np.concatenate([act, np.array([target], dtype=np.int64)])
else:
cols = act
desired = np.zeros(len(cols), dtype=np.float32)
if target < V:
desired[-1] = 1.0 # one-hot with margin 1
errs = u[cols] - desired
# dopamine gates plasticity amplitude (dips shrink, bursts amplify)
gate = float(np.clip(1.0 + d, 0.25, 2.0))
eta = np.float32(self.eta_delta * gate * nx)
W_out[:, cols] -= eta * errs[None, :] * x_eff[:, None]
# clip in place (fancy-indexed views need explicit writeback)
W_out[:, cols] = np.clip(W_out[:, cols], -self.w_clip, self.w_clip)
# light reward-modulated STDP on recurrent synapses of spiked neurons
if self.s.any():
spiked = np.nonzero(self.s)[0]
W_rec = self.W_rec
delta = np.float32(self.eta_stdp * d)
# pre-trace (x_prev) paired with post spikes, gated by dopamine
W_rec[:, spiked] += delta * self.x_prev[:, None]
np.clip(W_rec[:, spiked], self._rec_lo[:, None], self._rec_hi[:, None],
out=W_rec[:, spiked])
# top-down gain: TRUST dynamics, gated by the same RPE (a
# noradrenergic gain-modulation analogue) with counterfactual credit:
# fused right + fast wrong -> the slow prior SAVED the choice -> trust builds (additive)
# fused wrong + fast right -> the slow prior CORRUPTED it -> trust decays (multiplicative)
# Trust building slowly and decaying fast (loss aversion) lets the
# system keep a genuinely informative slow area while driving a
# noise- or frequency-prior-dominated one to beta ~ 0.
if self.hier and target < V:
pred_fast = int(np.argmax(u[:V]))
if pred_fast != target and correct: # slow saved it
self.beta = min(self.beta + self.eta_beta * gate, self.beta_max)
elif pred_fast == target and not correct: # slow corrupted it
self.beta *= float(0.98) ** gate
if self.beta < 1e-4:
self.beta = 0.0
else:
us_t = float(self.u_slow[target])
us_p = float(self.u_slow[pred_fast])
norm = abs(us_t) + abs(us_p) + 1e-6
margin = float(np.tanh(3.0 * (us_t - us_p) / norm))
self.beta = float(np.clip(
self.beta + 0.25 * self.eta_beta * gate * margin,
0.0, self.beta_max))
return correct, reward, d
def learn_reservoir(self, pred: int, target: int, x: np.ndarray,
u: np.ndarray | None = None) -> tuple[int, float, float]:
"""Training-regime dynamics WITHOUT readout plasticity: same reward,
same dopaminergic RPE, same recurrent STDP — only the W_out delta
update is skipped. Used at inference so the reservoir runs in its
training operating regime (continual plasticity, frozen readout)."""
correct = 1 if pred == target else 0
reward = float(correct)
self.baseline = self.baseline_momentum * self.baseline + (1 - self.baseline_momentum) * reward
d = reward - self.baseline
if self.s.any():
spiked = np.nonzero(self.s)[0]
W_rec = self.W_rec
delta = np.float32(self.eta_stdp * d)
W_rec[:, spiked] += delta * self.x_prev[:, None]
W_rec[:, spiked] = np.clip(W_rec[:, spiked], self._rec_lo[:, None], self._rec_hi[:, None])
return correct, reward, d
# ------------------------------------------------------- training driver
def train_pass(
self,
neurons: np.ndarray, # (T, k_in) int32 active input neurons per tick
cols: np.ndarray, # (T,) int64 target column per tick (col of token t+1)
log_every: int = 5000,
log_fn=None,
decay_every: int = 1024,
decay: float = 1e-4,
record_raster_from: int | None = None,
) -> dict:
"""One epoch over a token stream (teacher forcing on the next token).
``neurons[t]`` drives the reservoir at tick t; the prediction made
from the resulting state is scored against ``cols[t]``.
"""
self.reset()
T = len(cols)
acc_ema = None
d_ema = 0.0
n_correct = 0
n_correct_fast = 0
raster: list[tuple[int, np.ndarray]] = []
V_vocab = self.n_out - 1 # UNK occupies the last column
import time
t0 = time.perf_counter()
for t in range(T):
x = self.step(neurons[t])
u = (x - self.x_mean) @ self.W_out
if self.hier:
# behavioural prediction = fast readout + top-down slow prior
fused = u + np.float32(self.beta) * self.u_slow
pred = int(np.argmax(fused[:V_vocab]))
else:
pred = int(np.argmax(u[:V_vocab])) # vocabulary-only prediction
correct, reward, d = self.learn(pred, int(cols[t]), x, u=u)
n_correct += correct
if self.hier:
pred_fast = int(np.argmax(u[:V_vocab]))
if pred_fast == int(cols[t]):
n_correct_fast += 1
if (t + 1) % self.win == 0:
self.step_G()
if t + 1 < T:
seg = cols[t + 1 : min(t + 1 + self.win, T)]
g_target = int(np.bincount(seg).argmax())
self.learn_G(g_target, d)
acc_ema = reward if acc_ema is None else 0.999 * acc_ema + 0.001 * reward
d_ema = 0.999 * d_ema + 0.001 * d
if record_raster_from is not None and t >= record_raster_from:
raster.append((t, np.nonzero(self.s)[0].astype(np.int16)))
if (t + 1) % log_every == 0 and log_fn is not None:
dt = time.perf_counter() - t0
log_fn({
"tick": t + 1, "total": T,
"acc_ema": round(acc_ema, 4),
"acc_fast_ema": (round(0.999 * (n_correct_fast / max(t + 1, 1)), 4)
if self.hier else None),
"beta": (round(self.beta, 3) if self.hier else None),
"dopamine_ema": round(d_ema, 4),
"ticks_per_sec": round((t + 1) / max(dt, 1e-9), 1),
"elapsed_s": round(dt, 1),
})
if (t + 1) % decay_every == 0:
self.W_out *= np.float32(1.0 - decay)
if self.hier:
self.W_outG *= np.float32(1.0 - decay)
dt = time.perf_counter() - t0
return {
"ticks": T,
"accuracy": n_correct / max(T, 1),
"accuracy_fast_only": (n_correct_fast / max(T, 1)) if self.hier else None,
"beta": float(self.beta) if self.hier else None,
"acc_ema_final": acc_ema,
"elapsed_s": dt,
"ticks_per_sec": T / max(dt, 1e-9),
"raster": raster,
}
# ------------------------------------------------------------ (de)hydrate
def state_dict(self) -> dict:
sd = {
"config": {
"d_in": self.d_in, "k_in": self.k_in, "n_res": self.n_res,
"n_out": self.n_out, "seed": self.seed,
"in_fanout": self.in_fanout, "rec_fanout": self.rec_fanout,
"inh_frac": self.inh_frac, "lam": self.lam,
"base_thr": self.base_thr, "refrac": self.refrac,
"tau_trace": self.tau_trace,
"w_in_scale": self.w_in_scale, "w_rec_scale": self.w_rec_scale,
"w_clip": self.w_clip, "eta_delta": self.eta_delta, "eta_stdp": self.eta_stdp,
"eta_homeo": self.eta_homeo,
"target_rate": self.target_rate,
"hier": self.hier, "n_g": self.n_g, "win": self.win,
"w_g_scale": self.w_g_scale, "w_recg_scale": self.w_recg_scale,
"lam_g": self.lam_g, "tau_trace_g": self.tau_trace_g,
"target_rate_g": self.target_rate_g, "eta_homeo_g": self.eta_homeo_g,
"eta_delta_g": self.eta_delta_g,
"eta_beta": self.eta_beta, "beta_init": self.beta0, "beta_max": self.beta_max,
"trace_taus": list(self.trace_taus), "direct_input": self.direct_input,
"direct_tau": self.direct_tau, "direct_gain": self.direct_gain,
},
"W_rec": self.W_rec.astype(np.float32),
"W_out": self.W_out.astype(np.float32),
"inhibitory": self.inhibitory,
}
if self.hier:
sd["W_out_G"] = self.W_outG.astype(np.float32)
return sd
def load_state_dict(self, sd: dict) -> None:
cfg = sd["config"]
self.__dict__.update(cfg)
# v3 derived structure (defaults reproduce v2 for old checkpoints)
self.trace_taus = tuple(float(t) for t in getattr(self, "trace_taus", (self.tau_trace,)))
self.direct_input = bool(getattr(self, "direct_input", False))
self.n_banks = len(self.trace_taus)
self.n_state = int(sd["W_out"].shape[0])
self.W_rec = np.asarray(sd["W_rec"], dtype=np.float32)
self.W_out = np.asarray(sd["W_out"], dtype=np.float32)
self.inhibitory = np.asarray(sd["inhibitory"], dtype=np.bool_)
w_rec_max = 3.0 * self.w_rec_scale
self._rec_lo = np.where(self.inhibitory, -w_rec_max, 0.0).astype(np.float32)
self._rec_hi = np.where(self.inhibitory, 0.0, w_rec_max).astype(np.float32)
if "W_out_G" in sd and self.hier:
self.W_outG = np.asarray(sd["W_out_G"], dtype=np.float32)
else:
# v1 checkpoint without the slow area
self.hier = False
self.reset()
|