"""ATOM-native text model built around ``AtomPacket`` observations. The canonical toroidal modules are intentionally not modified here. This adapter replaces the GPT-2 ID/embedding input path with: AtomPacket.features -> eight toroidal atom properties and replaces the 50k-class surface target with a bounded byte packet head. The recurrent field, RK4 dynamics, interactions, aggregation, abstraction and consolidation are the existing ATOM components. This is the primary text path. Legacy GPT-2 tokenizer wrappers live under ``_quarantine_transformer_slop/``. The toroidal core remains in ``src.toroidal``. """ from __future__ import annotations import math from pathlib import Path from typing import Iterable import torch import torch.nn as nn import torch.nn.functional as F from .io.atomizer import AtomPacket, Atomizer from .speech_lock import format_dialogue_prompt, speech_ok from .toroidal.atom import ToroidalAtom from .toroidal.model import ToroidalFractalIntelligence # Sane band for shared energy_decay (always applied). Values near 0 turn the # decay term into near-total wipe; values >1 flip it into growth. DEFAULT_ENERGY_DECAY_BOUNDS: tuple[float, float] = (0.3, 0.95) # Fixed distinct prompts for L_ign α_bar when --field-ignorance-prompt-bank is on. # Probe-style set (not adjacent train ticks). Keep short for refresh cost. DEFAULT_IGNORANCE_PROMPTS: tuple[str, ...] = ( "Bonjour", "Qui es-tu ?", "Il était une fois", "Utilisateur: Bonjour\nAssistant:", "The future of AI is", "Valkyria Chronicles III is", "Hello, how are you?", "Comment ça va aujourd'hui ?", ) class AtomCompiler(nn.Module): """Compile a packet observation into the eight atom properties. There is no vocabulary lookup here. The only learned input map receives the fixed-size physical observation produced by ``Atomizer``. """ def __init__(self, feature_dim: int, d_model: int, hidden_dim: int | None = None) -> None: super().__init__() hidden_dim = hidden_dim or max(32, 2 * d_model) self.feature_dim = feature_dim self.d_model = d_model self.mapping = nn.Sequential( nn.Linear(feature_dim, hidden_dim), nn.GELU(), nn.Linear(hidden_dim, 8 * d_model), ) self.operation_gate = nn.Linear(feature_dim, 7) def forward(self, features: torch.Tensor, atom_count: int = 0) -> tuple[ToroidalAtom, torch.Tensor, torch.Tensor]: if features.ndim == 1: features = features.unsqueeze(0) if features.shape[-1] != self.feature_dim: raise ValueError( f"expected packet features with {self.feature_dim} values, got {features.shape[-1]}" ) raw = self.mapping(features).view(features.shape[0], 8, self.d_model) r = F.normalize(raw[:, 0], dim=-1) phi = raw[:, 1] omega = F.softplus(raw[:, 2]) + 1e-3 energy = torch.sigmoid(raw[:, 3]) kappa = F.softplus(raw[:, 4]) memory = F.normalize(raw[:, 5], dim=-1) tau = F.softplus(raw[:, 6]) + 1e-6 rho = torch.full( (features.shape[0], 1), min(atom_count // 64, 4), dtype=features.dtype, device=features.device, ) atom = ToroidalAtom( r=r, phi=phi, omega=omega, E=energy, kappa=kappa, M=memory, tau=tau, rho=rho, ) operation_logits = self.operation_gate(features) operation = operation_logits.argmax(dim=-1) confidence = operation_logits.softmax(dim=-1).max(dim=-1).values return atom, operation, confidence class AlphaOnlyMLP(nn.Module): """α-conditioned 2-layer map: Linear → GELU → Linear (no byte_decoder bypass). Used under ``field_obligatory_hard`` as the *only* trainable α→logit adapter. Input is the JL fingerprint (or any α-only feature); hidden defaults to 4*d. """ def __init__( self, in_dim: int, out_dim: int, hidden_dim: int, *, bias_out: bool = False, ) -> None: super().__init__() if hidden_dim < 1: raise ValueError("hidden_dim must be positive") self.in_dim = int(in_dim) self.hidden_dim = int(hidden_dim) self.out_dim = int(out_dim) self.fc1 = nn.Linear(self.in_dim, self.hidden_dim) self.fc2 = nn.Linear(self.hidden_dim, self.out_dim, bias=bias_out) def forward(self, x: torch.Tensor) -> torch.Tensor: return self.fc2(F.gelu(self.fc1(x))) class LastAtomReadout(nn.Module): """Last-atom readout + dentate 2-gram (ARCHITECTURE.md, bridges #20/#1). Next-byte logits from the last committed byte + previous byte + last atom phase. NOT payload-copy (no hist/winner broadcast). 1. embed last byte, embed previous byte (2-gram) 2. dentate: expand 4x -> ReLU -> keep top 25% -> project back 3. add phase(cos phi, sin phi) projection, GELU 4. linear to 256 logits """ def __init__(self, d_model: int, embed_dim: int | None = None, expand: int = 4) -> None: super().__init__() embed_dim = int(embed_dim or d_model) self.embed_dim = embed_dim self.d_model = int(d_model) self.byte_embed = nn.Embedding(256, embed_dim) hidden = expand * 2 * embed_dim self.expand = nn.Linear(2 * embed_dim, hidden) self.contract = nn.Linear(hidden, embed_dim) self.phase_proj = nn.Linear(2 * d_model, embed_dim) self.head = nn.Linear(embed_dim, 256) def dentate_keep(self, hidden_dim: int) -> int: return max(1, hidden_dim // 4) def forward(self, last_byte: int, prev_byte: int, phi: torch.Tensor) -> torch.Tensor: """Return 256 next-byte logits. ``phi`` is (d_model,) live phase.""" device = self.head.weight.device last = torch.tensor([int(last_byte) % 256], dtype=torch.long, device=device) prev = torch.tensor([int(prev_byte) % 256], dtype=torch.long, device=device) pair = torch.cat([self.byte_embed(last), self.byte_embed(prev)], dim=-1) h = F.relu(self.expand(pair)) keep = self.dentate_keep(h.shape[-1]) top_values, top_index = torch.topk(h, keep, dim=-1) sparse = torch.zeros_like(h).scatter(-1, top_index, top_values) z = self.contract(sparse) flat = phi.reshape(-1).to(device=device, dtype=z.dtype) if flat.numel() != self.d_model: raise ValueError(f"last-atom phi needs {self.d_model} elems, got {flat.numel()}") phase = torch.cat([torch.cos(flat), torch.sin(flat)], dim=-1) out = F.gelu(z + self.phase_proj(phase).unsqueeze(0)) return self.head(out).reshape(256) def _byte_cycle(buf: bytearray | bytes) -> bool: """True if the tail of ``buf`` closes a 2-8 byte repeat (anti-repeat). ARCHITECTURE.md says 2-6; extended to 8 because byte-tick outputs loop on 7-byte attractors (e.g. "Tu ont: "). Decode only, weights untouched. """ n_buf = len(buf) for n in (2, 3, 4, 5, 6, 7, 8): if n_buf >= 2 * n and bytes(buf[-n:]) == bytes(buf[-2 * n : -n]): return True return False def _tail_bytes(atom_payloads: list[bytes] | None) -> tuple[int, int]: """(last byte, previous byte) of living payloads; prev falls back to last.""" tails = [bytes(p or b"") for p in (atom_payloads or [])] tails = [p for p in tails if p] last = tails[-1][-1] if tails else 0 prev = tails[-2][-1] if len(tails) > 1 else last return last, prev class AtomSurfaceHead(nn.Module): """Decode one variable-length surface packet from the living toroidal field. The output alphabet is raw bytes (256 classes), not GPT-2's 50,257 token vocabulary. A bounded packet contains 1..``max_payload_bytes`` bytes and has a separate length distribution. Readout contract (field-first): surface_input = f(spectral field α, optional consolidation, atom.r) A LayerNorm + legacy linear path is retained for checkpoint compatibility, but every decode also mixes an explicit spectral summary of α (mean‖std) and a bias-free field→logit skip so prompt-conditioned α is not drowned by a shared decoder bias (the failure mode where inter-prompt logit cosine stayed ≈ 0.998 while α cosine was ≈ 0.74). """ # Printable UTF-8 / Latin-1 friendly prior used when ``prefer_printable``. _PRINTABLE = set(range(0x20, 0x7F)) | {0x09, 0x0A, 0x0D} | set(range(0xC2, 0xF5)) | set(range(0x80, 0xC0)) def __init__( self, d_model: int, max_payload_bytes: int = 32, n_modes: int | None = None, last_atom_readout: bool = False, ) -> None: super().__init__() if max_payload_bytes < 1: raise ValueError("max_payload_bytes must be positive") self.d_model = d_model self.n_modes = int(n_modes) if n_modes is not None else d_model self.max_payload_bytes = max_payload_bytes # Spectral living-field features: [mean(α) ‖ std(α) ‖ persist ‖ atom.r] self.field_feat_dim = 4 * d_model self.field_feat_norm = nn.LayerNorm(self.field_feat_dim) self.field_to_state = nn.Linear(self.field_feat_dim, d_model) # sigmoid(field_gate)≈0.88 at init → field-conditioned state dominates. self.field_gate = nn.Parameter(torch.tensor(2.0)) # Bias-free skip so α differences reach logits even when |b| is large. self.field_byte_skip = nn.Linear(self.field_feat_dim, max_payload_bytes * 256, bias=False) self.field_length_skip = nn.Linear(self.field_feat_dim, max_payload_bytes, bias=False) # softplus(4)≈4.0 — enough for inter-prompt logit cosine << 0.998 at load. self.skip_gate = nn.Parameter(torch.tensor(1.0)) # Hard-path couple: dedicated (NOT in _freeze_non_alpha_bypass). Soft hard # zeros field_byte_skip; this head re-opens persist‖atom.r → logits when # field_hard_couple_scale > 0. self.field_hard_couple_byte = nn.Linear( self.field_feat_dim, max_payload_bytes * 256, bias=False ) self.field_hard_couple_length = nn.Linear( self.field_feat_dim, max_payload_bytes, bias=False ) # Obligatory α readout (main CE path): full-α JL fingerprint → logits. # Frozen random map cannot be CE-collapsed; trainable residual can adapt. # zeros_like(α) ⇒ exact zero branch. Persist/atom_r cannot bypass. self.alpha_only_dim = 2 * d_model self._alpha_flat_dim = int(self.n_modes) * int(d_model) # Fixed JL projection of flattened α (buffer — not trained). jl = torch.empty(self.alpha_only_dim, self._alpha_flat_dim) torch.manual_seed(20260918) nn.init.normal_(jl, mean=0.0, std=(1.0 / self._alpha_flat_dim) ** 0.5) self.register_buffer("alpha_jl", jl, persistent=True) # Frozen random α→logit map (buffer) + trainable adapter. fr_b = torch.empty(max_payload_bytes * 256, self.alpha_only_dim) fr_l = torch.empty(max_payload_bytes, self.alpha_only_dim) nn.init.normal_(fr_b, mean=0.0, std=(1.0 / self.alpha_only_dim) ** 0.5) nn.init.normal_(fr_l, mean=0.0, std=(1.0 / self.alpha_only_dim) ** 0.5) self.register_buffer("alpha_byte_frozen", fr_b, persistent=True) self.register_buffer("alpha_length_frozen", fr_l, persistent=True) # Deeper α-only decode (hard-v2+): α_feat → hidden 4*d → logits. # Still conditioned ONLY on α (JL fingerprint); no byte_decoder/skip bypass. self.alpha_mlp_hidden = 4 * d_model self.alpha_byte_proj = AlphaOnlyMLP( self.alpha_only_dim, max_payload_bytes * 256, self.alpha_mlp_hidden, bias_out=False, ) self.alpha_length_proj = AlphaOnlyMLP( self.alpha_only_dim, max_payload_bytes, self.alpha_mlp_hidden, bias_out=False, ) # mix_w ∈ [obl_mix_floor, 1] applied to FROZEN branch — CE cannot shut off. self.obl_mix = nn.Parameter(torch.tensor(0.0)) self.obl_mix_floor = 0.35 self.obl_gate = nn.Parameter(torch.tensor(1.0)) # trainable additive scale self.obl_floor = 0.5 self.field_obligatory_readout = False # enabled via AtomNativeModel flag self.field_obligatory_hard = False # hard-v2: floor=1.0 + freeze bypass + α-proj self._soft_obl_mix_floor = 0.35 self.state_norm = nn.LayerNorm(d_model) self.byte_decoder = nn.Linear(d_model, max_payload_bytes * 256) self.length_decoder = nn.Linear(d_model, max_payload_bytes) self._init_field_readout() self._init_obligatory_readout() # Binary mask over byte alphabet (1=printable UTF-8 / Latin-1 friendly). # Used by decode bias and by printable_aux train loss on hard logits. _pm = torch.zeros(256) for value in self._PRINTABLE: _pm[value] = 1.0 self.register_buffer("printable_mask", _pm, persistent=False) # Atom-payload production (hard path): per-atom α-local embed + copy-bias # (no mean-pool / global-hist). NOT byte_decoder bypass. self.byte_embed = nn.Embedding(256, d_model) self.payload_alpha_gate = nn.Linear(self.alpha_only_dim, d_model, bias=False) self.payload_to_byte = nn.Linear(d_model, max_payload_bytes * 256, bias=False) self.payload_to_length = nn.Linear(d_model, max_payload_bytes, bias=False) self.payload_copy_scale = nn.Parameter(torch.tensor(1.0)) self.payload_enabled = True self._init_payload_production() self.last_atom_readout = bool(last_atom_readout) self.last_atom = None # CLI --last-atom-scale S (default 1.0): fixed gain on la_byte (hard mix). # S=1.0 = current behavior. Opt-in adaptive: see last_atom_scale_adaptive. self.last_atom_scale = 1.0 self.last_atom_scale_adaptive = False self.last_atom_scale_min = 0.0 self.last_atom_scale_max = 1.0 # Opt-in: reinject full field feats (mean‖std‖persist‖atom.r) into hard # logits via the existing bias-free field_byte_skip (hard early-return # otherwise discards that path). Default 0 = identical to current hard. self.field_hard_couple_scale = 0.0 # CLI --last-atom-dropout P (default 0.0 = exact current behavior, no RNG # draw). Training only (self.training AND grad enabled): each forward = # one byte-tick position; with prob P the la_byte contribution is zeroed # (no inverted scaling) so CE must be carried by the field path. # Eval / generation / no-grad predictions (efference own-byte pick) ignore P. self.last_atom_dropout = 0.0 # Runtime diagnostic only (not persisted): force la_byte = 0 in any mode. self.last_atom_force_off = False if self.last_atom_readout: if max_payload_bytes != 1: raise ValueError("last_atom_readout requires max_payload_bytes=1 (byte-tick)") self.last_atom = LastAtomReadout(d_model) def effective_last_atom_scale( self, alpha_term: "torch.Tensor", la_raw: "torch.Tensor", eps: float = 1e-8, ) -> "torch.Tensor": """Return S_eff for hard-mix last_atom contribution. Fixed mode: scalar last_atom_scale (default 1.0). Adaptive mode (opt-in): S_eff = clamp(α_rms / (la_rms + eps), S_min, S_max) with RMS detached so the scale itself is not a gradient pathway. """ if not bool(getattr(self, "last_atom_scale_adaptive", False)): return torch.tensor( float(getattr(self, "last_atom_scale", 1.0)), device=la_raw.device, dtype=la_raw.dtype, ) alpha_rms = alpha_term.detach().pow(2).mean().sqrt() la_rms = la_raw.detach().pow(2).mean().sqrt() s_min = float(getattr(self, "last_atom_scale_min", 0.0)) s_max = float(getattr(self, "last_atom_scale_max", 1.0)) s_eff = alpha_rms / (la_rms + float(eps)) return s_eff.clamp(min=s_min, max=s_max) def _init_payload_production(self) -> None: """Small init so payload branch is audible but does not swamp frozen α.""" with torch.no_grad(): nn.init.normal_(self.byte_embed.weight, mean=0.0, std=0.02) nn.init.zeros_(self.payload_alpha_gate.weight) # Slight identity-ish open: gate starts near 0.5 after sigmoid(0). nn.init.normal_(self.payload_to_byte.weight, mean=0.0, std=0.02) nn.init.normal_(self.payload_to_length.weight, mean=0.0, std=0.02) self.payload_copy_scale.fill_(1.0) def _init_field_readout(self) -> None: """Identity-on-mean + std residual; seeded Xavier skips. Safe for fresh + migrate.""" with torch.no_grad(): self.field_to_state.weight.zero_() eye = torch.eye(self.d_model, device=self.field_to_state.weight.device) self.field_to_state.weight[:, : self.d_model].copy_(eye) self.field_to_state.weight[:, self.d_model : 2 * self.d_model].copy_(0.5 * eye) self.field_to_state.bias.zero_() # Deterministic skip init so migrated checkpoints probe reproducibly. gen = torch.Generator(device="cpu") gen.manual_seed(20260917) for module in (self.field_byte_skip, self.field_length_skip): w = module.weight fan_in = w.shape[1] bound = (6.0 / (fan_in + w.shape[0])) ** 0.5 w.copy_( torch.empty_like(w, device="cpu") .uniform_(-bound, bound, generator=gen) .to(device=w.device, dtype=w.dtype) ) self.field_gate.fill_(2.0) self.skip_gate.fill_(1.0) # Small open so S>0 is audible but does not swamp α-MLP at tip load. nn.init.normal_(self.field_hard_couple_byte.weight, mean=0.0, std=0.02) nn.init.normal_(self.field_hard_couple_length.weight, mean=0.0, std=0.02) def _init_obligatory_readout(self) -> None: """Seed JL/frozen buffers + trainable adapter (deterministic).""" with torch.no_grad(): gen = torch.Generator(device="cpu") gen.manual_seed(20260918) jl = torch.empty_like(self.alpha_jl, device="cpu") jl.normal_(generator=gen, mean=0.0, std=(1.0 / self._alpha_flat_dim) ** 0.5) self.alpha_jl.copy_(jl.to(device=self.alpha_jl.device, dtype=self.alpha_jl.dtype)) for buf_name, fan_out in ( ("alpha_byte_frozen", self.alpha_byte_frozen.shape[0]), ("alpha_length_frozen", self.alpha_length_frozen.shape[0]), ): buf = getattr(self, buf_name) tmp = torch.empty_like(buf, device="cpu") tmp.normal_( generator=gen, mean=0.0, std=(1.0 / self.alpha_only_dim) ** 0.5, ) buf.copy_(tmp.to(device=buf.device, dtype=buf.dtype)) self._init_alpha_trainable_mlp(generator=gen) self.obl_gate.fill_(1.0) self.obl_mix.fill_(0.0) def _init_alpha_trainable_mlp( self, generator: torch.Generator | None = None ) -> None: """Xavier-uniform init for α-only MLP adapters (does not touch frozen JL/maps).""" if generator is None: generator = torch.Generator(device="cpu") generator.manual_seed(20260918) with torch.no_grad(): for module in (self.alpha_byte_proj, self.alpha_length_proj): for layer in (module.fc1, module.fc2): w = layer.weight fan_in = w.shape[1] bound = (6.0 / (fan_in + w.shape[0])) ** 0.5 w.copy_( torch.empty_like(w, device="cpu") .uniform_(-bound, bound, generator=generator) .to(device=w.device, dtype=w.dtype) ) if layer.bias is not None: layer.bias.zero_() def alpha_only_features(self, alpha: torch.Tensor) -> torch.Tensor: """JL fingerprint of full flattened α — no persist/atom_r (zeros stay zeros). mean‖std alone collapses inter-prompt cosine (~0.93) while full α sits near ~0.71; a fixed JL map preserves that separation without new attention. """ flat = alpha.reshape(-1) # Match buffer device/dtype; pad/trim if shape drifts. if flat.numel() < self._alpha_flat_dim: flat = F.pad(flat, (0, self._alpha_flat_dim - flat.numel())) elif flat.numel() > self._alpha_flat_dim: flat = flat[: self._alpha_flat_dim] flat = flat.to(device=self.alpha_jl.device, dtype=self.alpha_jl.dtype) return self.alpha_jl @ flat def obligatory_scale(self) -> torch.Tensor: """softplus(obl_gate) + floor — additive residual cannot reach zero.""" return F.softplus(self.obl_gate) + float(self.obl_floor) def obligatory_mix_weight(self) -> torch.Tensor: """Convex mix weight ∈ [obl_mix_floor, 1] — CE cannot shut α-branch off.""" floor = float(self.obl_mix_floor) return floor + (1.0 - floor) * torch.sigmoid(self.obl_mix) def payload_produce( self, atom_payloads: list[bytes] | None, a_hat: torch.Tensor, a_only: torch.Tensor, *, atom_energies: list[float | torch.Tensor] | None = None, ) -> tuple[torch.Tensor, torch.Tensor]: """Per-atom α-local payload embed + copy-bias (no mean-pool / global-hist). Each living atom contributes from its own payload, gated by similarity of that atom's embed with the α-derived gate and by atom energy. Softmax over atoms keeps the mixture local to α so distinct prompt atoms diversify surface logits. Returns (byte_logits [L,256], length_logits [L]). Vanishes when α is exactly zero or no non-empty payloads. No Transformer QKV; no byte_decoder reopen. """ device = a_hat.device dtype = a_hat.dtype L = self.max_payload_bytes zero_b = torch.zeros(L, 256, device=device, dtype=dtype) zero_l = torch.zeros(L, device=device, dtype=dtype) raw = list(atom_payloads or []) energy_raw = list(atom_energies) if atom_energies is not None else [1.0] * len(raw) if len(energy_raw) < len(raw): energy_raw = energy_raw + [1.0] * (len(raw) - len(energy_raw)) embeds: list[torch.Tensor] = [] lengths: list[int] = [] local_hists: list[torch.Tensor] = [] energies: list[torch.Tensor] = [] kept_payloads: list[bytes] = [] for payload, energy in zip(raw, energy_raw): payload_b = bytes(payload) if payload else b"" ids = list(payload_b[:L]) if not ids: continue kept_payloads.append(payload_b) lengths.append(len(ids)) idx = torch.tensor(ids, device=device, dtype=torch.long) embeds.append(self.byte_embed(idx).mean(dim=0)) hist_i = torch.zeros(256, device=device, dtype=dtype) hist_i.scatter_add_( 0, idx, torch.ones(idx.numel(), device=device, dtype=dtype), ) local_hists.append(hist_i) if torch.is_tensor(energy): e_val = energy.detach().to(device=device, dtype=dtype).reshape(-1).mean() else: e_val = torch.tensor(float(energy), device=device, dtype=dtype) energies.append(F.softplus(e_val).clamp_min(1e-6)) if not embeds: return zero_b, zero_l gate = torch.sigmoid(self.payload_alpha_gate(a_hat)) # α-local scores: payload-embed alignment with α-gate × energy. scores = [] for embed, energy in zip(embeds, energies): sim = (embed * gate).sum() scores.append(sim + torch.log(energy)) score_t = torch.stack(scores, dim=0) # Soft pool for embed MLP path; hard α-local winner for copy-bias so one # living atom's payload owns surface bytes (no mean-pool / global-hist). pool_w = F.softmax(score_t, dim=0) copy_w = torch.zeros_like(score_t) copy_w[int(score_t.argmax().item())] = 1.0 pooled = torch.stack( [pool_w[i] * embeds[i] for i in range(len(embeds))], dim=0 ).sum(dim=0) gated = pooled * gate byte_logits = self.payload_to_byte(gated).view(L, 256) length_logits = self.payload_to_length(gated) # Architectural gain: single-atom copy must stay audible vs frozen α RMS (~1). copy = F.softplus(self.payload_copy_scale) * 4.0 # Position-aligned copy only. No unigram broadcast across span slots. for i, payload in enumerate(kept_payloads): w = copy_w[i] for pos, b in enumerate(payload[:L]): byte_logits[pos, int(b)] = byte_logits[pos, int(b)] + copy * w if lengths: # Length prior from sharp α-local winner length (not uniform mean). mean_len = float( sum(copy_w[i].detach() * float(lengths[i]) for i in range(len(lengths))) / max(float(copy_w.detach().sum().item()), 1e-8) ) li = max(0, min(L - 1, int(round(mean_len)) - 1)) length_logits = length_logits.clone() length_logits[li] = length_logits[li] + copy # Presence gate: exact α=0 ⇒ off (hard zeroing); nonzero α ⇒ full-strength # payload branch (do not crush copy-bias by tiny JL RMS). alive = (a_only.detach().pow(2).sum() > 0).to(dtype=dtype) return alive * byte_logits, alive * length_logits def set_obligatory_hard(self, enabled: bool) -> None: """Hard-v2 obligatory: mix floor 1.0; freeze non-α bypass; α-proj + payload. Forward: logits = frozen_α_map(α) + cap * (scale*α_MLP(α) + payload_prod) with cap≤1 so trainable RMS cannot exceed frozen RMS. Decoder / field skip / gates stay zeroed+frozen; CE may train alpha_*_proj MLP (+ obl_gate) and atom-payload production. Field dynamics still train. Payload path is atom-native (not byte_decoder reopen). """ enabled = bool(enabled) self.field_obligatory_hard = enabled if enabled: self.field_obligatory_readout = True self.obl_mix_floor = 1.0 self._freeze_non_alpha_bypass(True) else: self.obl_mix_floor = float(getattr(self, "_soft_obl_mix_floor", 0.35)) self._freeze_non_alpha_bypass(False) def _freeze_non_alpha_bypass(self, freeze: bool) -> None: """Zero + freeze decoder/skip/gates that can bypass α on the CE path.""" modules = ( self.field_to_state, self.field_byte_skip, self.field_length_skip, self.byte_decoder, self.length_decoder, ) scalars = (self.field_gate, self.skip_gate, self.obl_mix) with torch.no_grad(): if freeze: for module in modules: for param in module.parameters(): param.zero_() param.requires_grad_(False) for param in scalars: param.zero_() param.requires_grad_(False) else: for module in modules: for param in module.parameters(): param.requires_grad_(True) for param in scalars: param.requires_grad_(True) def field_features( self, alpha: torch.Tensor, persistent_state: torch.Tensor | None = None, atom_r: torch.Tensor | None = None, ) -> torch.Tensor: """Build spectral living-field features from α (+ consolidation, atom).""" if alpha.ndim == 1: alpha = alpha.unsqueeze(0) mean = alpha.mean(dim=0) std = alpha.std(dim=0, unbiased=False) if persistent_state is None: persist = torch.zeros_like(mean) else: persist = ( persistent_state.mean(dim=0) if persistent_state.ndim > 1 else persistent_state ) persist = persist.to(device=mean.device, dtype=mean.dtype).reshape(-1) if persist.numel() != mean.numel(): persist = persist[: mean.numel()] if persist.numel() < mean.numel(): persist = F.pad(persist, (0, mean.numel() - persist.numel())) if atom_r is None: atom = torch.zeros_like(mean) else: atom = atom_r.mean(dim=0) if atom_r.ndim > 1 else atom_r atom = atom.to(device=mean.device, dtype=mean.dtype).reshape(-1) if atom.numel() != mean.numel(): atom = atom[: mean.numel()] if atom.numel() < mean.numel(): atom = F.pad(atom, (0, mean.numel() - atom.numel())) return torch.cat([mean, std, persist, atom], dim=-1) def field_conditioned_state( self, alpha: torch.Tensor, persistent_state: torch.Tensor | None = None, atom_r: torch.Tensor | None = None, legacy_state: torch.Tensor | None = None, ) -> torch.Tensor: """d_model state where spectral α dominates (gated residual w/ legacy).""" feats = self.field_feat_norm( self.field_features(alpha, persistent_state, atom_r) ) field_state = self.field_to_state(feats) gate = torch.sigmoid(self.field_gate) if legacy_state is None: return field_state legacy = legacy_state.mean(dim=0) if legacy_state.ndim > 1 else legacy_state legacy = legacy.to(device=field_state.device, dtype=field_state.dtype) return gate * field_state + (1.0 - gate) * legacy def forward( self, state: torch.Tensor | None = None, *, alpha: torch.Tensor | None = None, persistent_state: torch.Tensor | None = None, atom_r: torch.Tensor | None = None, atom_payloads: list[bytes] | None = None, atom_energies: list[float | torch.Tensor] | None = None, last_phi: torch.Tensor | None = None, ) -> dict[str, torch.Tensor]: """Decode from living field α when provided; else legacy mean-state path. When ``field_obligatory_readout`` is on, an α-only residual (mean‖std) is always added into the main CE logits with a non-zero floor scale so persist/atom_r / decoder bias cannot fully bypass living α. Under ``field_obligatory_hard``, living ``atom_payloads`` drive an α-local per-atom payload branch (no mean-pool / global-hist) alongside α-MLP. """ if alpha is not None: feats = self.field_feat_norm( self.field_features(alpha, persistent_state, atom_r) ) field_state = self.field_to_state(feats) gate = torch.sigmoid(self.field_gate) if state is None: combined = field_state else: legacy = state.mean(dim=0) if state.ndim > 1 else state legacy = legacy.to(device=field_state.device, dtype=field_state.dtype) combined = gate * field_state + (1.0 - gate) * legacy h = self.state_norm(combined) byte_logits = self.byte_decoder(h).view(self.max_payload_bytes, 256) length_logits = self.length_decoder(h) skip = F.softplus(self.skip_gate) # When obligatory: skip uses α-only feats (padded) so shared persist/ # atom_r cannot substitute for α inside the skip path either. if self.field_obligatory_readout: a_only = self.alpha_only_features(alpha) a_rms = a_only.pow(2).mean().sqrt().clamp_min(1e-8) a_hat = a_only / a_rms skip_in = F.pad(a_hat, (0, self.field_feat_dim - self.alpha_only_dim)) skip_in = self.field_feat_norm(skip_in) else: skip_in = feats byte_logits = byte_logits + skip * self.field_byte_skip(skip_in).view( self.max_payload_bytes, 256 ) length_logits = length_logits + skip * self.field_length_skip(skip_in) if self.field_obligatory_readout: a_only = self.alpha_only_features(alpha) a_rms = a_only.pow(2).mean().sqrt().clamp_min(1e-8) a_hat = a_only / a_rms # Frozen branch (CE cannot collapse) + trainable adapter. frozen_byte = (self.alpha_byte_frozen @ a_hat).view( self.max_payload_bytes, 256 ) frozen_len = self.alpha_length_frozen @ a_hat if getattr(self, "field_obligatory_hard", False): # Hard speech mix (ARCHITECTURE.md): trainable α-MLP + # 0.3 frozen JL + optional payload branch. No RMS cap on # the trainable branch: the cap pinned cap≈0.01 and crushed # trainable gradients ~100x (measured), blocking learning. # Payload stays outside any cap; α=0 still zeros payload # via unclamped a_scale. No decoder/skip reopen. train_byte = self.alpha_byte_proj(a_hat).view( self.max_payload_bytes, 256 ) train_len = self.alpha_length_proj(a_hat) if getattr(self, "payload_enabled", True): pay_byte, pay_len = self.payload_produce( atom_payloads, a_hat, a_only, atom_energies=atom_energies, ) else: pay_byte = torch.zeros_like(frozen_byte) pay_len = torch.zeros_like(frozen_len) obl = self.obligatory_scale() la_byte = torch.zeros_like(frozen_byte) if getattr(self, "last_atom", None) is not None: last_b, prev_b = _tail_bytes(atom_payloads) phi_vec = last_phi if phi_vec is None: phi_vec = torch.zeros( self.d_model, device=frozen_byte.device, dtype=frozen_byte.dtype, ) la_raw = self.last_atom(last_b, prev_b, phi_vec).unsqueeze(0) # Equalize last_atom vs α-MLP (obl*train_byte) when adaptive. scale = self.effective_last_atom_scale(obl * train_byte, la_raw) la_byte = scale * la_raw if bool(getattr(self, "last_atom_force_off", False)): la_byte = torch.zeros_like(la_byte) else: p_drop = float(getattr(self, "last_atom_dropout", 0.0) or 0.0) if ( p_drop > 0.0 and self.training and torch.is_grad_enabled() and (p_drop >= 1.0 or float(torch.rand(())) < p_drop) ): la_byte = torch.zeros_like(la_byte) # Field→hard-decode couple: reinject full spectral feats # (incl. persist‖atom.r) that the hard early-return else drops. # Uses dedicated W (field_byte_skip is zeroed+frozen under hard). couple_byte = torch.zeros_like(frozen_byte) couple_len = torch.zeros_like(frozen_len) s_couple = float(getattr(self, "field_hard_couple_scale", 0.0) or 0.0) if s_couple > 0.0: # `feats` already = LN([mean‖std‖persist‖atom.r]) above. couple_byte = s_couple * self.field_hard_couple_byte(feats).view( self.max_payload_bytes, 256 ) couple_len = s_couple * self.field_hard_couple_length(feats) return { "byte_logits": obl * train_byte + 0.3 * frozen_byte + pay_byte + la_byte + couple_byte, "length_logits": obl * train_len + 0.3 * frozen_len + pay_len + couple_len, } train_byte = self.alpha_byte_proj(a_hat).view(self.max_payload_bytes, 256) train_len = self.alpha_length_proj(a_hat) mix = self.obligatory_mix_weight() # Hard mix uses FROZEN map so inter-prompt α structure reaches logits. byte_logits = (1.0 - mix) * byte_logits + mix * frozen_byte length_logits = (1.0 - mix) * length_logits + mix * frozen_len obl = self.obligatory_scale() byte_logits = byte_logits + obl * train_byte length_logits = length_logits + obl * train_len return {"byte_logits": byte_logits, "length_logits": length_logits} if state is None: raise ValueError("AtomSurfaceHead.forward requires state or alpha") if state.ndim > 1: state = state.mean(dim=0) state = self.state_norm(state) byte_logits = self.byte_decoder(state).view(self.max_payload_bytes, 256) length_logits = self.length_decoder(state) return {"byte_logits": byte_logits, "length_logits": length_logits} def _apply_printable_bias(self, byte_logits: torch.Tensor, strength: float = 2.0) -> torch.Tensor: """Softly discourage control/non-text bytes without hard-masking UTF-8.""" if strength <= 0: return byte_logits mask = getattr(self, "printable_mask", None) if mask is None: penalty = torch.full( (256,), -strength, dtype=byte_logits.dtype, device=byte_logits.device, ) for value in self._PRINTABLE: penalty[value] = 0.0 else: # printable→0, non-printable→-strength (vectorized) penalty = (1.0 - mask.to(device=byte_logits.device, dtype=byte_logits.dtype)) * (-strength) # Keep NUL strongly suppressed; allow tab/LF/CR via printable set. penalty = penalty.clone() penalty[0] = -strength * 2.0 return byte_logits + penalty def printable_mass(self, byte_logits: torch.Tensor) -> torch.Tensor: """Per-position softmax mass on printable UTF-8 / Latin-1 friendly bytes.""" probs = byte_logits.softmax(dim=-1) mask = self.printable_mask.to(device=probs.device, dtype=probs.dtype) return (probs * mask).sum(dim=-1) def decode( self, output: dict[str, torch.Tensor], temperature: float = 1.0, top_k: int | None = None, deterministic: bool = True, prefer_printable: bool = True, ) -> bytes: if temperature <= 0: raise ValueError("temperature must be positive") length_logits = output["length_logits"] / temperature if deterministic: length = int(length_logits.argmax().item()) + 1 else: k = length_logits.numel() if top_k and top_k > 0: k = min(top_k, k) length_values, length_indices = torch.topk(length_logits, k) # Guard against non-finite / zero-mass softmax from extreme logits. probs = length_values.softmax(dim=-1) if not torch.isfinite(probs).all() or float(probs.sum()) <= 0: length = int(length_logits.argmax().item()) + 1 else: length = int(length_indices[torch.multinomial(probs, 1)].item()) + 1 length = max(1, min(length, self.max_payload_bytes)) byte_logits = output["byte_logits"][:length] / temperature # Hard α-MLP path: always prefer printable (chat_atom_native contract). if prefer_printable or getattr(self, "field_obligatory_hard", False): strength = 2.5 if getattr(self, "field_obligatory_hard", False) else 2.0 byte_logits = self._apply_printable_bias(byte_logits, strength=strength) if deterministic: values = byte_logits.argmax(dim=-1) else: if top_k and top_k > 0 and top_k < byte_logits.shape[-1]: values, indices = torch.topk(byte_logits, top_k, dim=-1) probs = values.softmax(dim=-1) if not torch.isfinite(probs).all(): values = byte_logits.argmax(dim=-1) else: picks = torch.multinomial(probs, 1) values = indices.gather(-1, picks).squeeze(-1) else: probs = byte_logits.softmax(dim=-1) if not torch.isfinite(probs).all(): values = byte_logits.argmax(dim=-1) else: values = torch.multinomial(probs, num_samples=1).squeeze(-1) return bytes(int(value) for value in values.tolist()) def field_leak_spectrum_rates( n_modes: int, lmin: float, lmax: float, slow_frac: float = 1.0 ) -> torch.Tensor: """Per-mode leak rates λ_m for ``--field-leak-spectrum LMIN LMAX``. λ is a geometric ladder from LMIN (slow memory) to LMAX (fast / local byte context) over the ``n_modes`` modes. The ladder is assigned by the *only* mode-dependent term of the linear toroidal dynamics, the rotation rate ``sin(mode_phase_m)`` (linear rate ``sin φ_m + energy_decay - 1``): the mode with the least intrinsic decay gets LMIN, the most-damped mode gets LMAX (stable argsort, ties -> lower index first). Because sin φ is smooth on the ring, λ is a smooth V-shaped profile around the torus (slowest at m≈n/4, fastest at m≈3n/4), so the neighbour coupling (phase_sync Laplacian) only mixes modes of similar timescale; interleaving would put a fast mode next to every slow one and the Laplacian would drain the slow modes. ``slow_frac`` F in (0, 1]: only the k = max(2, round(F·n)) lowest-decay modes carry the ladder LMIN → LMAX; all other modes sit at LMAX. F = 1 (default) = the ladder spans every mode. """ n = int(n_modes) slow_frac = float(slow_frac) if not 0.0 < slow_frac <= 1.0: raise ValueError("slow_frac must be in (0, 1]") k = n if slow_frac >= 1.0 else min(n, max(2, int(round(slow_frac * n)))) lmin = float(lmin) lmax = float(lmax) phase = torch.arange(n, dtype=torch.float64) * (2.0 * torch.pi / n) growth = torch.sin(phase) # stable: descending growth, ties broken by mode index order = sorted(range(n), key=lambda m: (-round(float(growth[m]), 12), m)) rank = torch.empty(n, dtype=torch.float64) for r, m in enumerate(order): rank[m] = float(r) frac = (rank / max(1, k - 1)).clamp(max=1.0) lam = lmin * (lmax / lmin) ** frac return lam.to(torch.float32) def field_leak_slow_block_modes(n_modes: int, frac: float) -> list[int]: """Modes of ``--field-leak-slow-block F``: one CONTIGUOUS block of k = max(2, round(F·n)) modes centred on m = n/2 (sin φ = 0, the ring point where the intrinsic RK4 rate dt·(sin φ_m + energy_decay − 1) is ~0). Contiguous so the phase-sync Laplacian only drains the block at its two edges (interleaved slow/fast modes would be drained every tick).""" n = int(n_modes) frac = float(frac) if not 0.0 < frac < 1.0: raise ValueError("field_leak_slow_block fraction must be in (0, 1)") k = min(n - 1, max(2, int(round(frac * n)))) start = n // 2 - k // 2 return [(start + i) % n for i in range(k)] def slow_mode_indices(rates: torch.Tensor | None, tol: float = 1e-6) -> list[int]: """Modes that are slower than the fast leak LMAX (the ``--field-leak-spectrum`` ladder minus its top rung). Empty when no spectrum / every mode at LMAX.""" if rates is None: return [] r = rates.detach().reshape(-1).to(torch.float64) lmax = float(r.max()) return [int(m) for m in range(r.numel()) if float(r[m]) < lmax - tol] class SlowModeReadout(nn.Module): """Own readout for the slow modes of ``--field-leak-spectrum`` (opt-in). ``--slow-mode-readout`` (docs/SLOW_MODE_READOUT.md). Input = the slow modes' state α[slow_idx] (n_slow × d_model), flattened and divided by its own RMS (so the slow content is read at unit scale whatever its amplitude, and never has to compete with the fast modes inside the 64-d a_hat JL fingerprint): x = (ŝ − μ) / σ per-dim running standardization (buffers) z = tanh(W_t · x + b_t) (rank-r trunk) Δlogits = W_o · sg(z) W_o zero-init -> step-0 logits unchanged mem_K(z) = W_K · z + b_K one 256-way head per memory lag K (aux only) Next-byte CE trains only W_o (z is a stop-gradient feature there); the trunk is trained only by the memory aux (``--slow-memory-loss``). μ/σ: ~92% of ŝ's energy is a static offset (measured on the 4996k weights), so unstandardized input let the head learn only that offset (the trunk saturated, z became a constant). μ/σ are running per-dim statistics updated on training ticks only (cumulative average for the first ``STAT_WINDOW`` ticks, then an EMA with that window), saved with the checkpoint and frozen at eval. Still α-only (no attention, no token lookup). Built under a forked RNG with a dedicated generator so enabling it never shifts the global RNG stream. """ SEED = 20260929 STAT_WINDOW = 2000 VAR_FLOOR = 1e-4 def __init__(self, n_slow: int, d_model: int, rank: int, out_dim: int, lags: Iterable[int] = ()) -> None: super().__init__() self.n_slow = int(n_slow) self.d_model = int(d_model) self.rank = int(rank) self.out_dim = int(out_dim) if self.n_slow < 1 or self.rank < 1: raise ValueError("SlowModeReadout needs n_slow >= 1 and rank >= 1") self.in_dim = self.n_slow * self.d_model self.register_buffer("in_mean", torch.zeros(self.in_dim)) self.register_buffer("in_var", torch.ones(self.in_dim)) self.register_buffer("n_seen", torch.zeros((), dtype=torch.float64)) with torch.random.fork_rng(devices=[]): self.trunk = nn.Linear(self.in_dim, self.rank) self.to_logits = nn.Linear(self.rank, self.out_dim, bias=False) self.mem_heads = nn.ModuleDict() gen = torch.Generator(device="cpu") gen.manual_seed(self.SEED) with torch.no_grad(): self._xavier(self.trunk.weight, gen) self.trunk.bias.zero_() self.to_logits.weight.zero_() for k in lags: self.add_lag(int(k)) @staticmethod def _xavier(w: torch.Tensor, gen: torch.Generator) -> None: bound = (6.0 / (w.shape[0] + w.shape[1])) ** 0.5 w.copy_(torch.empty(w.shape).uniform_(-bound, bound, generator=gen).to(w)) def add_lag(self, k: int) -> None: key = str(int(k)) if key in self.mem_heads: return with torch.random.fork_rng(devices=[]): head = nn.Linear(self.rank, 256) gen = torch.Generator(device="cpu") gen.manual_seed(self.SEED + 1 + int(k)) with torch.no_grad(): self._xavier(head.weight, gen) head.bias.zero_() head.to(device=self.trunk.weight.device, dtype=self.trunk.weight.dtype) self.mem_heads[key] = head def set_lags(self, lags: Iterable[int]) -> None: want = {str(int(k)) for k in lags} for key in list(self.mem_heads.keys()): if key not in want: del self.mem_heads[key] for k in sorted(int(x) for x in want): self.add_lag(k) def features(self, slow: torch.Tensor, update_stats: bool = False) -> torch.Tensor: flat = slow.reshape(-1).to(device=self.trunk.weight.device, dtype=self.trunk.weight.dtype) x = flat / flat.pow(2).mean().sqrt().clamp_min(1e-8) if update_stats: with torch.no_grad(): self.n_seen.add_(1.0) m = 1.0 / min(float(self.n_seen), float(self.STAT_WINDOW)) xd = x.detach() delta = xd - self.in_mean self.in_mean.add_(m * delta) self.in_var.mul_(1.0 - m).add_(m * delta * (xd - self.in_mean)) if float(self.n_seen) <= 1.0: self.in_var.fill_(1.0) x = (x - self.in_mean) / self.in_var.clamp_min(self.VAR_FLOOR).sqrt() return torch.tanh(self.trunk(x)) class FieldAmplitudeController: """Bound field amplitude without changing the toroidal core equations. The controller is an opt-in safety policy around the existing adapter. It rescales only when the field RMS exceeds ``max_rms``; directions and small amplitudes are left untouched. Dynamics, interactions and the eight atom properties remain the same. """ def __init__(self, max_rms: float | None = None, eps: float = 1e-6) -> None: if max_rms is not None and max_rms <= 0: raise ValueError("max_rms must be positive or None") self.max_rms = max_rms self.eps = eps def __call__(self, field: torch.Tensor) -> tuple[torch.Tensor, dict[str, float]]: rms_before = torch.sqrt(field.pow(2).mean() + self.eps) if self.max_rms is None: scale = torch.ones_like(rms_before) stabilized = field else: scale = torch.minimum( torch.ones_like(rms_before), field.new_tensor(self.max_rms) / (rms_before + self.eps), ) stabilized = field * scale rms_after = torch.sqrt(stabilized.pow(2).mean() + self.eps) return stabilized, { "field_rms_before": float(rms_before.detach().item()), "field_rms_after": float(rms_after.detach().item()), "field_scale": float(scale.detach().item()), } class AtomNativeModel(nn.Module): """Use existing ATOM dynamics with an atom-native input/output contract.""" def __init__( self, d_model: int = 8, n_modes: int = 8, n_atoms_max: int = 128, max_payload_bytes: int = 32, atomizer: Atomizer | None = None, field_max_rms: float | None = None, energy_decay_bounds: tuple[float, float] | None = None, enable_merge: bool = True, merge_coherence_threshold: float = 0.45, merge_energy_floor: float = 0.08, slow_every: int = 1, field_loss_weight: float = 0.0, field_contrast_weight: float = 0.0, field_contrast_margin: float = 0.55, field_ignorance_weight: float = 0.0, field_ignorance_margin: float = 0.85, field_ignorance_ablate_shared: bool = False, field_ignorance_prompt_bank: bool = False, field_obligatory_readout: bool = False, field_obligatory_hard: bool = False, last_atom_readout: bool = False, printable_aux_weight: float = 0.0, field_next_packet_weight: float = 0.0, field_leak: float = 0.0, field_leak_spectrum: tuple[float, float] | None = None, field_leak_spectrum_gain: str = "none", field_leak_spectrum_slow_frac: float = 1.0, slow_rms_rel_tol: float = 0.15, slow_mode_readout: bool = False, slow_readout_rank: int = 64, slow_readout_ahat: str = "exclude", slow_memory_weight: float = 0.0, slow_memory_lags: tuple[int, ...] = (16, 32, 64), slow_memory_target: str = "bag", field_bptt: int = 0, field_leak_learnable: bool = False, ) -> None: super().__init__() self.atomizer = atomizer or Atomizer(max_span_bytes=max_payload_bytes, pack_mode="linguistic") self.core = ToroidalFractalIntelligence( vocab_size=256, d_model=d_model, n_modes=n_modes, n_atoms_max=n_atoms_max, ) self.compiler = AtomCompiler(self.atomizer.feature_dim, d_model) self.surface = AtomSurfaceHead( d_model, max_payload_bytes=max_payload_bytes, n_modes=n_modes, last_atom_readout=bool(last_atom_readout), ) self.max_payload_bytes = max_payload_bytes self.field_controller = FieldAmplitudeController(field_max_rms) self.field_max_rms = field_max_rms # Opt-in per-tick field leak λ (--field-leak). 0.0 = exact legacy path # (no op at all). λ>0: α ← (1-λ)·α before each atom injection, so the # field is a contractive, recency-weighted memory instead of an # integrator whose unstable modes pin it at the field_max_rms clamp. self.field_leak = float(field_leak) if not 0.0 <= self.field_leak < 1.0: raise ValueError("field_leak must be in [0, 1)") # Opt-in multi-timescale leak (--field-leak-spectrum LMIN LMAX). None = # off = exact current behavior (scalar --field-leak path, or nothing). # When set it REPLACES the scalar leak: α_m ← (1-λ_m)·α_m per mode. self.field_leak_spectrum = None self.field_leak_spectrum_gain = "none" self.field_leak_spectrum_slow_frac = 1.0 self._field_leak_vec = None self._field_gain_vec = None self.set_field_leak_spectrum( field_leak_spectrum, gain=field_leak_spectrum_gain, slow_frac=field_leak_spectrum_slow_frac, ) # Always-on physical band. The weak prior floor (1e-3) let persist # training drift energy_decay to ~0.001 and collapse the field. if energy_decay_bounds is None: energy_decay_bounds = DEFAULT_ENERGY_DECAY_BOUNDS self.energy_decay_bounds = energy_decay_bounds # Continuum intelligence knobs (structure + field dependence, not Θ growth). self.enable_merge = bool(enable_merge) self.merge_coherence_threshold = float(merge_coherence_threshold) self.merge_energy_floor = float(merge_energy_floor) self.core.aggregation.phase_coherence_threshold = self.merge_coherence_threshold self.core.aggregation.merge_energy_floor = self.merge_energy_floor self.slow_every = max(1, int(slow_every)) self.field_loss_weight = float(field_loss_weight) self.field_contrast_weight = float(field_contrast_weight) self.field_contrast_margin = float(field_contrast_margin) self.field_ignorance_weight = float(field_ignorance_weight) self.field_ignorance_margin = float(field_ignorance_margin) self.field_ignorance_ablate_shared = bool(field_ignorance_ablate_shared) self.field_ignorance_prompt_bank = bool(field_ignorance_prompt_bank) self.field_obligatory_hard = bool(field_obligatory_hard) self.last_atom_readout = bool(last_atom_readout) self.field_obligatory_readout = bool(field_obligatory_readout) or self.field_obligatory_hard # Light aux: push hard α-MLP logits toward printable UTF-8 mass (no decoder bypass). self.printable_aux_weight = float(printable_aux_weight) # Predict *next* packet features from α (+ atom_r in field_features). self.field_next_packet_weight = float(field_next_packet_weight) self.surface.field_obligatory_readout = self.field_obligatory_readout if self.field_obligatory_hard: self.surface.set_obligatory_hard(True) else: self.surface.field_obligatory_hard = False self.slow_rms_rel_tol = float(slow_rms_rel_tol) self.field_probe = nn.Linear(self.surface.field_feat_dim, self.atomizer.feature_dim) self.field_next_probe = nn.Linear(self.surface.field_feat_dim, self.atomizer.feature_dim) self.merge_count_total = 0 self._tick = 0 self._efference_every = 0 # set by trainer CLI (--efference-every) self._prev_field_rms: float | None = None # Detached rolling α snapshots for harder field-contrast negatives # (mode-shuffle alone is too weak vs CE; inter-prompt collapse returns). self._alpha_bank: list[torch.Tensor] = [] self._alpha_bank_max = 8 # Distinct-prompt α bank for L_ign (filled by _refresh_prompt_alpha_bank). self._prompt_alpha_bank: list[torch.Tensor] = [] self._prompt_bank_refresh_every = 256 self._ignorance_prompts: tuple[str, ...] = DEFAULT_IGNORANCE_PROMPTS # The legacy encoder and legacy 256-way production head are not used # by this adapter. Keep them in the core checkpoint for compatibility, # but make clear that no GPT-style embedding participates in training. for parameter in self.core.encoder.parameters(): parameter.requires_grad_(False) for parameter in self.core.production.parameters(): parameter.requires_grad_(False) self.core.state.alpha.requires_grad_(False) # Opt-in own readout for the slow spectrum modes (--slow-mode-readout, # docs/SLOW_MODE_READOUT.md). Off = no module, no state, no RNG draw: # every code path below is skipped and behaviour is exactly unchanged. self.slow_mode_readout = False self.slow_readout = None self.slow_readout_rank = int(slow_readout_rank) self.slow_readout_ahat = "exclude" self.slow_memory_weight = 0.0 self.slow_memory_lags: tuple[int, ...] = tuple(int(k) for k in slow_memory_lags) self.slow_memory_target = "bag" self._slow_idx = None self._slow_fast_mask = None self._slow_hist = bytearray() if slow_mode_readout: self.set_slow_mode_readout( True, rank=slow_readout_rank, ahat=slow_readout_ahat, memory_weight=slow_memory_weight, memory_lags=slow_memory_lags, memory_target=slow_memory_target, ) # Opt-in truncated BPTT through the field (--field-bptt K, # docs/DECODE_FIX_AND_BPTT.md). 0 = off = exact legacy path (α detached # every tick, injection under no_grad). K>0: while training with grad # enabled, α_t keeps its autograd graph to α_{t-1} and the atom injection # is differentiable; the trainer backprops/steps every K ticks and calls # detach_field_graph() at the window boundary. Forward values are # identical to the legacy path (same ops, same order). self.field_bptt = 0 self._bptt_alpha: torch.Tensor | None = None self.set_field_bptt(field_bptt) # Opt-in learnable per-mode leak (--field-leak-learnable): λ_m = # sigmoid(field_leak_logit_m), init at --field-leak. None = off (no # parameter, checkpoint layout unchanged). self.field_leak_logit: nn.Parameter | None = None if field_leak_learnable: self.set_field_leak_learnable(True) # --field-leak-slow-block (opt-in, needs the learnable leak): None = off. self.field_leak_slow_block: dict | None = None self._slow_block_mask: torch.Tensor | None = None self._slow_block_floor: torch.Tensor | None = None # ------------------------------------------------------------------ # Truncated BPTT through the field (opt-in) # ------------------------------------------------------------------ def set_field_bptt(self, k: int) -> None: k = int(k or 0) if k < 0: raise ValueError("field_bptt must be >= 0") self.field_bptt = k self._bptt_alpha = None def detach_field_graph(self) -> None: """Window boundary: keep α's value, drop its autograd history.""" if self._bptt_alpha is not None: self._bptt_alpha = self._bptt_alpha.detach() def _bptt_prev_alpha(self) -> torch.Tensor: """α_{t-1} with its graph when it is still the live field value, else a detached copy (after reset/load/eval ticks the graph is stale).""" prev = self._bptt_alpha st = self.core.state.alpha if prev is None or prev.shape != st.shape or not torch.equal(prev.detach(), st.detach()): return st.detach().clone() return prev def _bptt_active(self) -> bool: return bool(self.field_bptt > 0 and self.training and torch.is_grad_enabled()) def set_field_leak_learnable(self, enabled: bool, init: float | None = None) -> None: if getattr(self, "field_leak_slow_block", None) is not None: self.field_leak_slow_block = None self._slow_block_mask = None self._slow_block_floor = None if not enabled: self.field_leak_logit = None return if getattr(self, "field_leak_spectrum", None) is not None: raise ValueError("field_leak_learnable is exclusive with field_leak_spectrum") lam = float(self.field_leak if init is None else init) lam = min(max(lam, 1e-4), 1.0 - 1e-4) n_modes = self.core.state.n_modes logit = math.log(lam / (1.0 - lam)) self.field_leak_logit = nn.Parameter( torch.full((n_modes, 1), logit, dtype=torch.float32, device=self.core.state.alpha.device) ) def learnable_leak_rates(self) -> torch.Tensor | None: if self.field_leak_logit is None: return None if getattr(self, "field_leak_slow_block", None) is not None: return self._slow_block_rates(self.field_leak_logit) return torch.sigmoid(self.field_leak_logit) # ------------------------------------------------------------------ # --field-leak-slow-block F [cap C] [gain ema|none] (opt-in long memory) # ------------------------------------------------------------------ SLOW_BLOCK_INIT_SIGMA = 0.25 # slow-mode logit init: λ = floor + cap·0.25 SLOW_BLOCK_EPS = 1e-3 # net per-tick decay floor of a slow mode def _slow_block_rates(self, logit: torch.Tensor) -> torch.Tensor: cfg = self.field_leak_slow_block mask = self._slow_block_mask.to(device=logit.device) floor = self._slow_block_floor.to(device=logit.device, dtype=logit.dtype) sig = torch.sigmoid(logit) return torch.where(mask, floor + float(cfg["cap"]) * sig, sig) def slow_block_input_gain(self, lam: torch.Tensor | None = None) -> torch.Tensor | None: """Per-mode input gain g_m for the slow block ('ema': g_m = λ_m / ref, so a slow mode is an EMA of its input with the amplitude of a λ=ref mode instead of a 1/λ_m integrator that would swamp the readout / hit the RMS cap). None = no gain.""" cfg = getattr(self, "field_leak_slow_block", None) if cfg is None or cfg.get("gain", "ema") == "none": return None if lam is None: lam = self.learnable_leak_rates() mask = self._slow_block_mask.to(device=lam.device) return torch.where(mask, lam / float(cfg["ref"]), torch.ones_like(lam)) def set_field_leak_slow_block(self, frac: float | None, cap: float = 0.02, gain: str = "ema", ref: float | None = None, reinit: bool = True) -> None: """Enable/disable the slow block (needs --field-leak-learnable). Slow modes (``field_leak_slow_block_modes``): λ_m = floor_m + cap·sigmoid(logit_m), floor_m = max(0, dt·(sin φ_m + ed_max − 1)) + 1e-3, so the net per-tick retention (1−λ_m)·exp(dt·(sin φ_m + ed − 1)) stays < 1 for every allowed energy_decay (no runaway mode) while λ can go ~100× below the learned fast leak; the optimiser can never push a slow mode above floor+cap. Other modes are unchanged (sigmoid). ``reinit``: slow logits start at sigmoid = 0.25. Disabling keeps every λ_m value (logits re-expressed in the plain sigmoid form).""" if self.field_leak_logit is None: if frac: raise ValueError("--field-leak-slow-block needs --field-leak-learnable") self.field_leak_slow_block = None return if not frac: if getattr(self, "field_leak_slow_block", None) is not None: lam = self.learnable_leak_rates().detach().clamp(1e-6, 1 - 1e-6) self.field_leak_slow_block = None with torch.no_grad(): self.field_leak_logit.copy_(torch.log(lam / (1 - lam))) self.field_leak_slow_block = None self._slow_block_mask = None self._slow_block_floor = None return n = int(self.core.state.n_modes) modes = field_leak_slow_block_modes(n, frac) cap = float(cap) if not 0.0 < cap < 0.5: raise ValueError("slow block cap must be in (0, 0.5)") if gain not in ("ema", "none"): raise ValueError("slow block gain must be 'ema' or 'none'") dt = float(getattr(self.core.dynamics, "dt", 0.01)) ed_hi = float((self.energy_decay_bounds or DEFAULT_ENERGY_DECAY_BOUNDS)[1]) phase = torch.arange(n, dtype=torch.float64) * (2.0 * math.pi / n) floor = (dt * (torch.sin(phase) + ed_hi - 1.0)).clamp(min=0.0) + self.SLOW_BLOCK_EPS mask = torch.zeros(n, 1, dtype=torch.bool) mask[modes, 0] = True was_on = getattr(self, "field_leak_slow_block", None) is not None self._slow_block_mask = mask self._slow_block_floor = floor.to(torch.float32).view(n, 1) self.field_leak_slow_block = {"frac": float(frac), "cap": cap, "gain": gain, "ref": float(self.field_leak if ref is None else ref) or 0.05, "modes": modes} if reinit and not was_on: s0 = self.SLOW_BLOCK_INIT_SIGMA with torch.no_grad(): self.field_leak_logit[mask] = math.log(s0 / (1 - s0)) @property def trainable_parameters(self) -> Iterable[nn.Parameter]: return (parameter for parameter in self.parameters() if parameter.requires_grad) def trainable_parameter_count(self) -> int: return sum(parameter.numel() for parameter in self.trainable_parameters) def stabilize_dynamics_parameters(self) -> dict[str, float]: """Project shared dynamics params into a physical range every step. ``energy_decay`` is called a decay parameter by the core. Without a strong floor it can drift near 0 and wipe the field each tick (``decay = (energy_decay - 1) * alpha``). Bounds are always-on (default ``DEFAULT_ENERGY_DECAY_BOUNDS``). Does not alter ``src/toroidal/dynamics.py``. """ parameter = self.core.dynamics.dynamics bounds = self.energy_decay_bounds or DEFAULT_ENERGY_DECAY_BOUNDS low, high = bounds if not (0.0 < low <= high): raise ValueError("energy_decay_bounds must satisfy 0 < low <= high") with torch.no_grad(): before = float(parameter.energy_decay.detach().item()) parameter.energy_decay.clamp_(low, high) parameter.coupling_scale.clamp_(0.0, 2.0) parameter.phase_sync.clamp_(-1.0, 1.0) after = float(parameter.energy_decay.detach().item()) return { "coupling_scale": float(parameter.coupling_scale.detach().item()), "energy_decay": after, "phase_sync": float(parameter.phase_sync.detach().item()), "energy_decay_before": before, "energy_decay_repaired": before != after, "energy_decay_bounds": (float(low), float(high)), } def reset_state(self, reset_atomizer: bool = True) -> None: """Start a new explicit episode while preserving learned weights.""" if getattr(self, "_bptt_alpha", None) is not None: self._bptt_alpha = None with torch.no_grad(): self.core.state.alpha.zero_() self.core.state.t.zero_() self.core.consolidation.persistence.zero_() self.core.consolidation.persistence_strength.zero_() self.core.abstraction.abstraction_memory.zero_() self.core.abstraction.abstraction_usage.zero_() self.core.abstraction.abstraction_age.zero_() self.core.atoms = type(self.core.atoms)() self.core.energy_history = [] self.core.consolidation_count = 0 self.core.abstraction_count = 0 self._tick = 0 self._prev_field_rms = None self._alpha_bank = [] if getattr(self, "slow_readout", None) is not None: self._slow_hist = bytearray() if reset_atomizer: self.atomizer.reset() def _output_state( self, alpha: torch.Tensor, persistent_state: torch.Tensor | None, abstractions: list[dict], atom_r: torch.Tensor | None = None, ) -> torch.Tensor: """Field-dominated surface conditioning vector (also used by probes). Prefer the spectral living-field readout when available so probes and decode agree. Abstractions remain a light residual on the legacy mean. """ legacy = alpha.mean(dim=0) if alpha.ndim > 1 else alpha if persistent_state is not None: legacy = legacy + ( persistent_state.mean(dim=0) if persistent_state.ndim > 1 else persistent_state ) if abstractions: patterns = [ item["pattern"].to(device=legacy.device, dtype=legacy.dtype).reshape(-1) for item in abstractions if item["pattern"].numel() == self.core.encoder.d_model ] if patterns: legacy = legacy + 0.1 * torch.stack(patterns).mean(dim=0) # Always-on consolidation buffer when per-tick persist is absent. persist = persistent_state if persist is None: persist = self.core.consolidation.persistence return self.surface.field_conditioned_state( alpha, persistent_state=persist, atom_r=atom_r, legacy_state=legacy, ) def set_merge_thresholds( self, coherence_threshold: float | None = None, energy_floor: float | None = None, ) -> None: """Apply MERGE gates onto AggregationEngine (CLI / resume overrides).""" if coherence_threshold is not None: self.merge_coherence_threshold = float(coherence_threshold) self.core.aggregation.phase_coherence_threshold = self.merge_coherence_threshold if energy_floor is not None: self.merge_energy_floor = float(energy_floor) self.core.aggregation.merge_energy_floor = self.merge_energy_floor @staticmethod def _atom_prop_batch1(t: torch.Tensor, *, is_rho: bool = False) -> torch.Tensor: """Normalize MERGE outputs to AtomCompiler shapes: (1, d) / rho (1, 1).""" x = t.detach().clone().reshape(-1) if is_rho: return x[:1].reshape(1, 1) return x.reshape(1, -1) def _maybe_merge_atoms(self, *, enabled: bool | None = None) -> tuple[int, dict]: """MERGE coherent structural atoms into heavier ones (detached memory). ``enabled`` overrides ``self.enable_merge`` for one call. Chat/probe ingest passes ``enabled=False`` so prompt packets stay distinct living atoms; training leaves it ``None`` and keeps MERGE thr=0.45. """ empty_diag = {"max_phase_coherence": 0.0, "n_pairs_above_energy_floor": 0} use_merge = self.enable_merge if enabled is None else bool(enabled) if not use_merge or len(self.core.atoms) < 2: return 0, empty_diag atoms = self.core.atoms merged, remove_idx, merge_count, diag = self.core.aggregation.merge_coherent( atoms.r, atoms.phi, atoms.omega, atoms.E, atoms.kappa, atoms.M, atoms.tau, atoms.rho, ) if merge_count <= 0 or not remove_idx: return 0, diag # Capture payloads before remove (MERGE concatenates constituent bytes). pre_payloads = [bytes(getattr(a, "payload", b"") or b"") for a in atoms.atoms] atoms.remove(remove_idx) # Aggregation squeezes the compiler's leading batch-1 dim for math; restore # (1, d) / (1, 1) so ToroidalAtomCollection can stack with live atoms. max_keep = max(64, int(self.max_payload_bytes) * 4) new_atoms = [] for item in merged: constituents = item.get("constituents") or [] merged_payload = b"".join( pre_payloads[i] for i in constituents if 0 <= i < len(pre_payloads) ) if len(merged_payload) > max_keep: merged_payload = merged_payload[-max_keep:] new_atoms.append( ToroidalAtom( r=self._atom_prop_batch1(item["r"]), phi=self._atom_prop_batch1(item["phi"]), omega=self._atom_prop_batch1(item["omega"]), E=self._atom_prop_batch1(item["E"]), kappa=self._atom_prop_batch1(item["kappa"]), M=self._atom_prop_batch1(item["M"]), tau=self._atom_prop_batch1(item["tau"]), rho=self._atom_prop_batch1(item["rho"], is_rho=True), payload=merged_payload, ) ) atoms.extend(new_atoms) self.merge_count_total += merge_count return merge_count, diag FIELD_LEAK_SPECTRUM_GAINS = ("none", "ema", "sqrt") def set_field_leak_spectrum( self, spectrum, gain: str | None = None, slow_frac: float | None = None ) -> None: """Set/clear the per-mode leak spectrum (None/empty = off). ``gain`` (only used when the spectrum is on) scales the per-tick *input* of mode m (this tick's evolve of the atom projection + token drive from a zero field) by g_m, so slow modes do not integrate the input to a much larger amplitude than fast ones and swamp the normalized a_hat readout: none : g_m = 1 (pure per-mode leak) ema : g_m = λ_m / LMAX (every mode ≈ an EMA of the input; the LMAX modes are exactly the scalar-λ=LMAX field) sqrt : g_m = sqrt(λ_m / LMAX) ``slow_frac`` (see ``field_leak_spectrum_rates``): fraction of modes carrying the LMIN→LMAX ladder, the rest at LMAX. ``None`` keeps the current setting for ``gain`` / ``slow_frac``. """ if slow_frac is not None: slow_frac = float(slow_frac) if not 0.0 < slow_frac <= 1.0: raise ValueError("field_leak_spectrum_slow_frac must be in (0, 1]") self.field_leak_spectrum_slow_frac = slow_frac if gain is not None: gain = str(gain or "none") if gain not in self.FIELD_LEAK_SPECTRUM_GAINS: raise ValueError(f"field_leak_spectrum_gain must be one of {self.FIELD_LEAK_SPECTRUM_GAINS}") self.field_leak_spectrum_gain = gain if spectrum is None or len(spectrum) == 0: self.field_leak_spectrum = None self._field_leak_vec = None self._field_gain_vec = None self._refresh_slow_idx() return if len(spectrum) != 2: raise ValueError("field_leak_spectrum must be (LMIN, LMAX)") lmin, lmax = float(spectrum[0]), float(spectrum[1]) if not (0.0 < lmin <= lmax < 1.0): raise ValueError("field_leak_spectrum needs 0 < LMIN <= LMAX < 1") self.field_leak_spectrum = (lmin, lmax) n_modes = int(self.core.state.n_modes) lam = field_leak_spectrum_rates( n_modes, lmin, lmax, getattr(self, "field_leak_spectrum_slow_frac", 1.0) ) # [n_modes, 1] retention factor, broadcast over d_model. self._field_leak_vec = (1.0 - lam).view(n_modes, 1) g = getattr(self, "field_leak_spectrum_gain", "none") if g == "ema": self._field_gain_vec = (lam / lmax).view(n_modes, 1) elif g == "sqrt": self._field_gain_vec = (lam / lmax).sqrt().view(n_modes, 1) else: self._field_gain_vec = None self._refresh_slow_idx() SLOW_READOUT_AHAT = ("exclude", "mix") SLOW_MEMORY_TARGETS = ("bag", "byte") def _refresh_slow_idx(self) -> None: """Recompute slow-mode indices / fast mask when the readout exists. No spectrum (or no slow mode) -> readout inactive (idx None).""" if getattr(self, "slow_readout", None) is None: return idx = slow_mode_indices(self.field_leak_rates()) if not idx or len(idx) != self.slow_readout.n_slow: self._slow_idx = None self._slow_fast_mask = None return n_modes = int(self.core.state.n_modes) self._slow_idx = torch.tensor(idx, dtype=torch.long) mask = torch.ones(n_modes, 1) mask[self._slow_idx] = 0.0 self._slow_fast_mask = mask def slow_readout_active(self) -> bool: return getattr(self, "slow_readout", None) is not None and getattr(self, "_slow_idx", None) is not None def set_slow_mode_readout( self, enabled: bool, *, rank: int | None = None, ahat: str | None = None, memory_weight: float | None = None, memory_lags: Iterable[int] | None = None, memory_target: str | None = None, ) -> None: """Enable/disable the slow-mode readout (``--slow-mode-readout``). Needs ``--field-leak-spectrum`` (the slow modes are its λ < LMAX modes). An existing compatible head (same n_slow / rank) is kept, so a resumed checkpoint keeps its trained weights; memory heads are added/removed to match ``memory_lags``. ``enabled=False`` drops the module entirely. """ if not enabled: self.slow_mode_readout = False self.slow_readout = None self._slow_idx = None self._slow_fast_mask = None self.slow_memory_weight = 0.0 self._slow_hist = bytearray() return if rank is not None: self.slow_readout_rank = int(rank) if ahat is not None: if ahat not in self.SLOW_READOUT_AHAT: raise ValueError(f"slow_readout_ahat must be one of {self.SLOW_READOUT_AHAT}") self.slow_readout_ahat = str(ahat) if memory_weight is not None: if float(memory_weight) < 0: raise ValueError("slow_memory_weight must be >= 0") self.slow_memory_weight = float(memory_weight) if memory_lags is not None: lags = tuple(sorted({int(k) for k in memory_lags})) if any(k < 1 for k in lags): raise ValueError("slow_memory_lags must be >= 1") self.slow_memory_lags = lags if memory_target is not None: if memory_target not in self.SLOW_MEMORY_TARGETS: raise ValueError(f"slow_memory_target must be one of {self.SLOW_MEMORY_TARGETS}") self.slow_memory_target = str(memory_target) if getattr(self, "field_leak_spectrum", None) is None: raise ValueError("slow_mode_readout requires field_leak_spectrum (the slow modes)") idx = slow_mode_indices(self.field_leak_rates()) if not idx: raise ValueError("slow_mode_readout: the spectrum has no mode slower than LMAX") d_model = int(self.core.encoder.d_model) sr = getattr(self, "slow_readout", None) if sr is None or sr.n_slow != len(idx) or sr.d_model != d_model or sr.rank != self.slow_readout_rank: sr = SlowModeReadout( len(idx), d_model, self.slow_readout_rank, self.max_payload_bytes * 256, self.slow_memory_lags, ).to(device=self.core.state.alpha.device) self.slow_readout = sr else: sr.set_lags(self.slow_memory_lags) self.slow_mode_readout = True self._slow_hist = bytearray() self._refresh_slow_idx() def readout_alpha(self, alpha: torch.Tensor) -> torch.Tensor: """α as the existing (a_hat) readout sees it: slow modes zeroed when the slow readout is active with ``slow_readout_ahat='exclude'``; else α.""" if self.slow_readout_active() and self.slow_readout_ahat == "exclude": return alpha * self._slow_fast_mask.to(device=alpha.device, dtype=alpha.dtype) return alpha def _slow_memory_loss(self, output: dict) -> tuple[torch.Tensor, dict[str, float]]: """Aux: predict the recent past from the slow modes through their own head. target 'bag' : for each lag K, the byte histogram of the bytes at lags [K//2, K) (lag 0 = the current byte) -> soft-target CE. target 'byte' : the single byte at lag K -> CE. The slow state is detached here: with 1-tick truncated gradients the aux can only make the modes *readable* (train the head), it cannot change what earlier ticks wrote, and it must not steer the shared dynamics. """ sr = self.slow_readout slow = output["slow_state"].detach() z = sr.features(slow) hist = self._slow_hist n = len(hist) losses = [] info: dict[str, float] = {} for k in self.slow_memory_lags: head = sr.mem_heads[str(int(k))] if self.slow_memory_target == "byte": if n < k + 1: continue tgt = torch.tensor([hist[n - 1 - k]], dtype=torch.long, device=z.device) lk = F.cross_entropy(head(z).unsqueeze(0), tgt) else: lo, hi = max(0, n - k), n - k // 2 if hi <= lo: continue ids = torch.tensor(list(hist[lo:hi]), dtype=torch.long, device=z.device) p = torch.zeros(256, device=z.device, dtype=z.dtype) p.scatter_add_(0, ids, torch.ones(ids.numel(), device=z.device, dtype=z.dtype)) p = p / p.sum() lk = -(p * F.log_softmax(head(z), dim=-1)).sum() losses.append(lk) info[f"slow_memory_loss_{int(k)}"] = float(lk.detach().item()) if not losses: return torch.zeros((), device=z.device), info loss = torch.stack(losses).mean() info["slow_memory_loss"] = float(loss.detach().item()) return loss, info def field_leak_rates(self) -> torch.Tensor | None: """Per-mode λ actually applied each tick (None = no per-mode leak).""" if getattr(self, "_field_leak_vec", None) is None: return None return 1.0 - self._field_leak_vec.view(-1) def _field_rms_stable(self, rms: float) -> bool: prev = self._prev_field_rms self._prev_field_rms = rms if prev is None: return False return abs(rms - prev) / (abs(prev) + 1e-6) <= self.slow_rms_rel_tol def _advance( self, atom: ToroidalAtom, operation: torch.Tensor, confidence: torch.Tensor, *, merge_enabled: bool | None = None, ) -> dict: """Advance the unchanged toroidal core by one compiled atom. Fast path (every tick): inject + evolve + surface. Slow path (``slow_every`` + RMS-stable): abstraction + consolidation. Optional MERGE densifies coherent structural memory without GPU farms. ``merge_enabled`` overrides training MERGE for chat/probe ingest only. """ self._tick += 1 keep = getattr(self, "_field_leak_vec", None) gain_vec = getattr(self, "_field_gain_vec", None) if keep is not None else None injected = None bptt = self._bptt_active() if hasattr(self, "field_bptt") else False learn_lam = self.learnable_leak_rates() if getattr(self, "field_leak_logit", None) is not None else None alpha_graph = None if bptt: # --field-bptt: same ops/order as the legacy block below, but out of # place and with autograd (leak, then differentiable injection). alpha_graph = self._bptt_prev_alpha() if keep is not None: alpha_graph = alpha_graph * keep.to(device=alpha_graph.device, dtype=alpha_graph.dtype) elif learn_lam is not None: alpha_graph = alpha_graph * (1.0 - learn_lam) else: leak = float(getattr(self, "field_leak", 0.0) or 0.0) if leak > 0.0: alpha_graph = alpha_graph * (1.0 - leak) injected = self.core.state._projection( atom.r, atom.phi, atom.omega, atom.E, atom.kappa ) slow_gain = self.slow_block_input_gain(learn_lam) if learn_lam is not None else None if slow_gain is not None: alpha_graph = alpha_graph + injected * slow_gain else: alpha_graph = alpha_graph + injected with torch.no_grad(): self.core.state.alpha.copy_(alpha_graph.detach()) elif learn_lam is not None: with torch.no_grad(): self.core.state.alpha.mul_(1.0 - learn_lam) slow_gain = self.slow_block_input_gain(learn_lam) if slow_gain is not None: self.core.state.alpha.add_( self.core.state._projection(atom.r, atom.phi, atom.omega, atom.E, atom.kappa) * slow_gain ) else: self.core.state.add_atom_contribution(atom.r, atom.phi, atom.omega, atom.E, atom.kappa) elif keep is not None: # Multi-timescale leak: per-mode α_m ← (1-λ_m)·α_m (replaces scalar λ). with torch.no_grad(): alpha_state = self.core.state.alpha alpha_state.mul_(keep.to(device=alpha_state.device, dtype=alpha_state.dtype)) else: leak = float(getattr(self, "field_leak", 0.0) or 0.0) if leak > 0.0: with torch.no_grad(): self.core.state.alpha.mul_(1.0 - leak) if alpha_graph is not None or learn_lam is not None: pass # --field-bptt / --field-leak-learnable: already injected above elif gain_vec is not None: # Same op as add_atom_contribution, but keep the projection for the # per-mode input gain below. with torch.no_grad(): injected = self.core.state._projection( atom.r, atom.phi, atom.omega, atom.E, atom.kappa ) self.core.state.alpha.add_(injected) else: self.core.state.add_atom_contribution(atom.r, atom.phi, atom.omega, atom.E, atom.kappa) # Structural memory is intentionally detached from the current loss # graph. The current atom still drives dynamics and receives gradients. memory_atom = ToroidalAtom( r=atom.r.detach().clone(), phi=atom.phi.detach().clone(), omega=atom.omega.detach().clone(), E=atom.E.detach().clone(), kappa=atom.kappa.detach().clone(), M=atom.M.detach().clone(), tau=atom.tau.detach().clone(), rho=atom.rho.detach().clone(), payload=bytes(getattr(atom, "payload", b"") or b""), ) self.core.atoms.add(memory_atom) merge_count, merge_diag = self._maybe_merge_atoms(enabled=merge_enabled) if alpha_graph is not None: alpha = alpha_graph else: alpha = self.core.state.get_field().detach().clone() alpha_new = self.core.dynamics.evolve(alpha, input_token=atom.r) if gain_vec is not None: # The tick is affine in α: evolve(x + p) = Lin(x) + evolve(p) with # evolve(p) = this tick's input (projection + token drive). Scale # only the input part per mode: + (g_m - 1)·evolve(p). tick_input = self.core.dynamics.evolve(injected, input_token=atom.r) g = gain_vec.to(device=alpha_new.device, dtype=alpha_new.dtype) alpha_new = alpha_new + (g - 1.0) * tick_input interaction_energy = self.core.interaction.field_interaction(alpha_new) left = torch.roll(alpha_new, 1, 0) right = torch.roll(alpha_new, -1, 0) alpha_new = alpha_new + 0.1 * self.core.dynamics.dynamics.phase_sync * ( left + right - 2.0 * alpha_new ) alpha_new, amplitude = self.field_controller(alpha_new) rms_after = float(amplitude["field_rms_after"]) do_slow = self.slow_every <= 1 or ( self._tick % self.slow_every == 0 and self._field_rms_stable(rms_after) ) if self.slow_every > 1 and self._tick % self.slow_every != 0: self._prev_field_rms = rms_after aggregates: list[dict] = [] abstractions: list[dict] = [] persistent_state = None if do_slow: if len(self.core.atoms) > 10: aggregates, _ = self.core.aggregation.aggregate( self.core.atoms.r, self.core.atoms.phi, self.core.atoms.omega, self.core.atoms.E, self.core.atoms.kappa, self.core.atoms.M, self.core.atoms.tau, self.core.atoms.rho, ) for aggregate in aggregates: index = self.core.abstraction.create_or_update_abstraction([aggregate]) if index >= 0: abstractions.append( { "id": index, "pattern": self.core.abstraction.abstraction_memory[index].detach(), } ) self.core.abstraction_count += 1 self.core.abstraction.step_age() if len(self.core.energy_history) > 5: energy = self.core.atoms.E.mean(dim=0) stability = self.core.consolidation.compute_stability( energy, self.core.energy_history ) persistent_state, mask = self.core.consolidation.consolidate( alpha_new, energy.unsqueeze(0), stability.unsqueeze(0), ) if mask.any(): self.core.consolidation_count += int(mask.sum().item()) self.core.energy_history.append(self.core.atoms.E.mean(dim=0).detach()) self.core.energy_history = self.core.energy_history[-20:] # Living consolidation buffer (EMA) — not only the per-tick consolidate(). persist_for_readout = persistent_state if persist_for_readout is None: persist_for_readout = self.core.consolidation.persistence slow_on = self.slow_readout_active() # --slow-mode-readout with ahat='exclude': the existing readout sees α # with the slow modes zeroed; they are read only by their own head. alpha_read = self.readout_alpha(alpha_new) if slow_on else alpha_new output_state = self._output_state( alpha_read, persist_for_readout, abstractions, atom_r=atom.r ) living_atoms = list(self.core.atoms.atoms) living_payloads = [ bytes(getattr(a, "payload", b"") or b"") for a in living_atoms ] living_energies = [ a.E.detach().float().mean() for a in living_atoms ] la_last_b, la_prev_b = _tail_bytes(living_payloads) surface = self.surface( output_state, alpha=alpha_read, persistent_state=persist_for_readout, atom_r=atom.r, atom_payloads=living_payloads, atom_energies=living_energies, last_phi=atom.phi.reshape(-1), ) slow_extra: dict = {} if slow_on: # Own slow-mode readout: Δlogits = W_o·z, z = tanh(W_t·ŝ), W_o zero-init. # A field term, so it stays on under last_atom_force_off. z is a # stop-gradient feature for next-byte CE: CE trains W_o only. The # trunk W_t is shaped only by --slow-memory-loss (first sweep: when CE # also trained W_t, it drove the trunk bias into tanh saturation, # z became a constant and the head degenerated into an output bias). slow_state = alpha_new[self._slow_idx.to(alpha_new.device)] upd = bool(self.training and torch.is_grad_enabled()) with torch.no_grad(): z = self.slow_readout.features(slow_state, update_stats=upd) add = self.slow_readout.to_logits(z).view_as(surface["byte_logits"]) surface = {**surface, "byte_logits": surface["byte_logits"] + add} self._slow_hist.extend(bytes(getattr(atom, "payload", b"") or b"")) keep = max(self.slow_memory_lags or (1,)) + 1 if len(self._slow_hist) > 4 * keep: del self._slow_hist[: len(self._slow_hist) - keep] slow_extra = {"slow_state": slow_state, "slow_z": z} with torch.no_grad(): self.core.state.alpha.copy_(alpha_new.detach()) self.core.state.t.add_(self.core.dynamics.dt) if hasattr(self, "field_bptt"): self._bptt_alpha = alpha_new if bptt else None return { **slow_extra, "surface": surface, "field": alpha_new, "confidence": confidence, "operation": operation, "interaction_energy": interaction_energy, "aggregates": aggregates, "abstractions": abstractions, "persistent_state": persistent_state, "n_atoms": len(self.core.atoms), "merge_count": merge_count, "merge_count_total": self.merge_count_total, "max_phase_coherence": float(merge_diag.get("max_phase_coherence", 0.0)), "n_pairs_above_energy_floor": int(merge_diag.get("n_pairs_above_energy_floor", 0)), "slow_tick": do_slow, "atom_r": atom.r, "la_bytes": (la_last_b, la_prev_b), "la_phi": atom.phi.reshape(-1).detach(), **amplitude, } def forward_packet( self, packet: AtomPacket, *, merge_enabled: bool | None = None ) -> dict: features = packet.features.to(self.core.state.alpha.device) atom, operation, confidence = self.compiler(features, atom_count=len(self.core.atoms)) # Living atom carries the packet's surface bytes for payload production. atom.payload = bytes(packet.payload or b"") return self._advance(atom, operation, confidence, merge_enabled=merge_enabled) @torch.no_grad() def _refresh_prompt_alpha_bank(self) -> None: """Fill ``_prompt_alpha_bank`` from fixed distinct prompts without lasting mutation of the live train field / atoms / atomizer / train α-bank. Snapshots core + atomizer + tick bookkeeping, runs each prompt from a clean episode, stores detached α, then restores. Used only when ``field_ignorance_prompt_bank`` is on. """ device = self.core.state.alpha.device snap = { "state": {k: v.detach().clone() if torch.is_tensor(v) else v for k, v in self.core.state.state_dict().items()}, "atoms": self.core.atoms.state_dict(), "consolidation": { k: v.detach().clone() if torch.is_tensor(v) else v for k, v in self.core.consolidation.state_dict().items() }, "abstraction": { k: v.detach().clone() if torch.is_tensor(v) else v for k, v in self.core.abstraction.state_dict().items() }, "atomizer": self.atomizer.state_dict(), "energy_history": list(self.core.energy_history), "consolidation_count": self.core.consolidation_count, "abstraction_count": self.core.abstraction_count, "tick": self._tick, "prev_field_rms": self._prev_field_rms, "alpha_bank": [a.detach().clone() for a in self._alpha_bank], "training": self.training, } was_training = self.training self.eval() bank: list[torch.Tensor] = [] try: for text in self._ignorance_prompts: self.reset_state(reset_atomizer=True) # restore train α-bank after reset_state cleared it (temp) packets = self.atomizer.encode(text, reset=True) if not packets: continue out = None for packet in packets: out = self.forward_packet(packet) if out is not None: bank.append(out["field"].detach().clone().to(device=device)) finally: self.core.state.load_state_dict(snap["state"], strict=False) self.core.atoms.load_state_dict(snap["atoms"]) self.core.consolidation.load_state_dict(snap["consolidation"]) self.core.abstraction.load_state_dict(snap["abstraction"]) self.atomizer.load_state_dict(snap["atomizer"]) self.core.energy_history = snap["energy_history"] self.core.consolidation_count = snap["consolidation_count"] self.core.abstraction_count = snap["abstraction_count"] self._tick = snap["tick"] self._prev_field_rms = snap["prev_field_rms"] self._alpha_bank = snap["alpha_bank"] if was_training: self.train() else: self.eval() self._prompt_alpha_bank = bank def _field_auxiliary_losses( self, output: dict, current: AtomPacket, target: AtomPacket | None = None, ) -> tuple[torch.Tensor, dict[str, float]]: """Keep surface conditioned on α; probe persistence + next-packet from field. Contrastive hinge: logits from true α must differ from zeroed / shuffled α (cosine below margin). Field-ignorance hinge: logits from true α must differ from logits under stopgrad mean/bank of *other* prompts' α (not zero). Persistence probe: reconstruct *current* packet features from spectral field feats. Next-packet production: predict *target* packet features from the same α (+ atom_r) features — small weight under hard. Weighted small vs CE. """ device = output["field"].device zero = torch.zeros((), device=device) info: dict[str, float] = { "field_contrast_loss": 0.0, "field_persist_loss": 0.0, "field_next_packet_loss": 0.0, "field_ignorance_loss": 0.0, "printable_aux_loss": 0.0, "printable_mass_mean": float("nan"), "field_logit_cos_zero": float("nan"), "field_logit_cos_shuf": float("nan"), "field_logit_cos_ignorance": float("nan"), } contrast = zero persist = zero next_pkt = zero ignorance = zero printable = zero alpha = output["field"] atom_r = output.get("atom_r") persist_state = output.get("persistent_state") if persist_state is None: persist_state = self.core.consolidation.persistence true_flat = output["surface"]["byte_logits"].reshape(-1) # Last-atom readout: aux hinges compare same-bytes/different-alpha so # they keep isolating alpha (bytes held constant, no shape change). la_extra: dict = {} if getattr(self.surface, "last_atom", None) is not None: la_pair = output.get("la_bytes") or (0, 0) la_extra = { "atom_payloads": [bytes([la_pair[1]]), bytes([la_pair[0]])], "last_phi": output.get("la_phi"), } if self.field_contrast_weight > 0: surf_zero = self.surface( None, alpha=torch.zeros_like(alpha), persistent_state=persist_state, atom_r=atom_r, **la_extra, ) cos_z = F.cosine_similarity( true_flat.unsqueeze(0), surf_zero["byte_logits"].reshape(-1).unsqueeze(0), ).squeeze() if alpha.shape[0] > 1: shuf_alpha = alpha[torch.randperm(alpha.shape[0], device=alpha.device)] else: shuf_alpha = -alpha surf_shuf = self.surface( None, alpha=shuf_alpha, persistent_state=persist_state, atom_r=atom_r, **la_extra, ) cos_s = F.cosine_similarity( true_flat.unsqueeze(0), surf_shuf["byte_logits"].reshape(-1).unsqueeze(0), ).squeeze() # Harder negative: a prior living field from the episode bank (if any). cos_b = true_flat.new_zeros(()) if self._alpha_bank: bank_alpha = self._alpha_bank[int(torch.randint(len(self._alpha_bank), (1,)).item())] bank_alpha = bank_alpha.to(device=alpha.device, dtype=alpha.dtype) if bank_alpha.shape == alpha.shape and not torch.allclose(bank_alpha, alpha, atol=1e-5): surf_bank = self.surface( None, alpha=bank_alpha, persistent_state=persist_state, atom_r=atom_r, **la_extra, ) cos_b = F.cosine_similarity( true_flat.unsqueeze(0), surf_bank["byte_logits"].reshape(-1).unsqueeze(0), ).squeeze() margin = self.field_contrast_margin # Tighter margin on bank negatives so inter-prompt logits must separate. contrast = ( F.relu(cos_z - margin) + F.relu(cos_s - margin) + F.relu(cos_b - (margin - 0.15)) ) info["field_logit_cos_zero"] = float(cos_z.detach().item()) info["field_logit_cos_shuf"] = float(cos_s.detach().item()) info["field_logit_cos_bank"] = float(cos_b.detach().item()) if cos_b.ndim == 0 or cos_b.numel()==1 else float("nan") info["field_contrast_loss"] = float(contrast.detach().item()) feats = None if self.field_loss_weight > 0 or self.field_next_packet_weight > 0: feats = self.surface.field_feat_norm( self.surface.field_features(alpha, persist_state, atom_r) ) if self.field_loss_weight > 0: pred = self.field_probe(feats) cur_feat = current.features.to(device=pred.device, dtype=pred.dtype) cos = F.cosine_similarity(pred.unsqueeze(0), cur_feat.unsqueeze(0)).squeeze() persist = 1.0 - cos info["field_persist_loss"] = float(persist.detach().item()) # Field → next-packet production: predict *upcoming* packet features from α+atoms. if self.field_next_packet_weight > 0 and target is not None: pred_next = self.field_next_probe(feats) next_feat = target.features.to(device=pred_next.device, dtype=pred_next.dtype) cos_n = F.cosine_similarity(pred_next.unsqueeze(0), next_feat.unsqueeze(0)).squeeze() next_pkt = 1.0 - cos_n info["field_next_packet_loss"] = float(next_pkt.detach().item()) # Field-ignorance: surface must not map any non-zero α to one shared # logit template. Compare ℓ(α) vs ℓ(sg[α_bar]) where α_bar is the # sliding mean (or bank) of *other* prompts — not zero, not same-prompt. if self.field_ignorance_weight > 0: if self.field_ignorance_prompt_bank: if not self._prompt_alpha_bank: self._refresh_prompt_alpha_bank() source = self._prompt_alpha_bank else: # Bank already includes current snap (appended in transition_loss); # use other entries only. source = self._alpha_bank[:-1] others = [ a for a in source if a.shape == alpha.shape and not torch.allclose(a, alpha.detach(), atol=1e-5) ] if others: alpha_bar = torch.stack( [a.to(device=alpha.device, dtype=alpha.dtype) for a in others] ).mean(dim=0) alpha_bar = alpha_bar.detach() # sg[α_bar] # Ablate shared atom_r / persistence on the α_bar call only so # the hinge isolates α-driven readout. ℓ(α) keeps live state. if self.field_ignorance_ablate_shared: bar_persist = None bar_atom_r = None else: bar_persist = persist_state bar_atom_r = atom_r surf_bar = self.surface( None, alpha=alpha_bar, persistent_state=bar_persist, atom_r=bar_atom_r, **la_extra, ) cos_ign = F.cosine_similarity( true_flat.unsqueeze(0), surf_bar["byte_logits"].reshape(-1).unsqueeze(0), ).squeeze() ignorance = F.relu(cos_ign - self.field_ignorance_margin) info["field_logit_cos_ignorance"] = float(cos_ign.detach().item()) info["field_ignorance_loss"] = float(ignorance.detach().item()) # Printable UTF-8 aux on hard (or any) surface logits: reward mass on # printable bytes so CE under frozen+MLP stops favoring binary garbage. # Gradients flow into α-MLP only under hard (decoder frozen). if self.printable_aux_weight > 0: byte_logits = output["surface"]["byte_logits"] mass = self.surface.printable_mass(byte_logits) # 1 - mass ∈ [0,1]; also lightly penalize via -log(mass) for sharp push. printable = (1.0 - mass).mean() + 0.25 * (-mass.clamp_min(1e-6).log()).mean() info["printable_aux_loss"] = float(printable.detach().item()) info["printable_mass_mean"] = float(mass.detach().mean().item()) total_aux = ( self.field_contrast_weight * contrast + self.field_loss_weight * persist + self.field_next_packet_weight * next_pkt + self.field_ignorance_weight * ignorance + self.printable_aux_weight * printable ) return total_aux, info def transition_loss(self, current: AtomPacket, target: AtomPacket) -> tuple[torch.Tensor, dict]: """Predict the complete next atom surface packet (+ optional field aux).""" output = self.forward_packet(current) # Update α bank (detached) for cross-field contrast on later steps. with torch.no_grad(): snap = output["field"].detach().clone() self._alpha_bank.append(snap) if len(self._alpha_bank) > self._alpha_bank_max: self._alpha_bank.pop(0) # Refresh distinct-prompt bank for L_ign (does not alter train bank). if ( self.field_ignorance_prompt_bank and self.field_ignorance_weight > 0 and ( not self._prompt_alpha_bank or (self._tick > 0 and self._tick % self._prompt_bank_refresh_every == 0) ) ): self._refresh_prompt_alpha_bank() surface = output["surface"] payload = target.payload[: self.max_payload_bytes] target_length = torch.tensor( [len(payload) - 1], dtype=torch.long, device=surface["length_logits"].device ) length_loss = F.cross_entropy(surface["length_logits"].unsqueeze(0), target_length) target_bytes = torch.tensor(list(payload), dtype=torch.long, device=surface["byte_logits"].device) byte_logits = surface["byte_logits"][: len(payload)] byte_loss = F.cross_entropy(byte_logits, target_bytes) ce_loss = length_loss + byte_loss aux_loss, aux_info = self._field_auxiliary_losses(output, current, target) loss = ce_loss + aux_loss if "slow_state" in output and float(getattr(self, "slow_memory_weight", 0.0)) > 0.0: mem_loss, mem_info = self._slow_memory_loss(output) loss = loss + self.slow_memory_weight * mem_loss aux_info = {**aux_info, **mem_info} return loss, { "loss": float(loss.detach().item()), "ce_loss": float(ce_loss.detach().item()), "length_loss": float(length_loss.detach().item()), "byte_loss": float(byte_loss.detach().item()), "n_atoms": len(self.core.atoms), "surface": surface, "field_norm": float(output["field"].detach().norm().item()), "field_rms_before": output["field_rms_before"], "field_rms_after": output["field_rms_after"], "field_scale": output["field_scale"], "merge_count": int(output.get("merge_count", 0)), "merge_count_total": int(output.get("merge_count_total", self.merge_count_total)), "max_phase_coherence": float(output.get("max_phase_coherence", 0.0)), "n_pairs_above_energy_floor": int(output.get("n_pairs_above_energy_floor", 0)), "slow_tick": bool(output.get("slow_tick", True)), **aux_info, } def efference_loss(self, current: AtomPacket, target: AtomPacket) -> tuple[torch.Tensor, dict]: """One efference tick (bridge #9): predict from gold state, commit the model's OWN byte (generate-like), then CE on the gold target from that state. Trains recovery from free-run drift (train~=generate). Falls back to a normal transition when the atomizer holds a pending span (only possible off byte-tick; byte-tick buffer is always empty). """ if len(self.atomizer._buffer) == 0: with torch.no_grad(): pred_bytes = self.predict_packet(current, deterministic=True, merge_enabled=False) pred_packet = self.atomizer.packet_from_payload(bytes(pred_bytes)) return self.transition_loss(pred_packet, target) return self.transition_loss(current, target) def free_run_aux_loss( self, start: AtomPacket, golds: list[AtomPacket], *, weight: float = 1.0, ) -> tuple[torch.Tensor, dict]: """Multi-tick free-run CE using the SAME commit path as generate_packets. Math (L_roll): for horizon H = len(golds), L_roll = (1/H) Σ_h CE(logits(s_h), gold_h) where s_0 = start, and s_{h+1} = packet_from_payload(argmax(decode(s_h))) with the discrete commit stop-grad (scheduled sampling). Gradients flow through each step's surface logits (α-MLP + last_atom + …) under the free-run field trajectory — closing teacher-forced ↔ chat mismatch. Mutates living field like generate (no restore): continuum after this step is free-run-drifted. Falls back to transition_loss when golds is empty or atomizer has a pending span. """ if not golds: raise ValueError("free_run_aux_loss requires at least one gold packet") if len(self.atomizer._buffer) != 0: return self.transition_loss(start, golds[0]) device = self.core.state.alpha.device total_ce = torch.zeros((), device=device) byte_losses: list[float] = [] length_losses: list[float] = [] current = start n_steps = 0 last_output: dict | None = None for gold in golds: output = self.forward_packet(current, merge_enabled=False) last_output = output surface = output["surface"] payload = gold.payload[: self.max_payload_bytes] if not payload: # Skip empty gold; still need a commit to advance free-run. with torch.no_grad(): pred_bytes = self.surface.decode( surface, deterministic=True, prefer_printable=True ) current = self.atomizer.packet_from_payload(bytes(pred_bytes)) continue target_length = torch.tensor( [len(payload) - 1], dtype=torch.long, device=surface["length_logits"].device ) length_loss = F.cross_entropy( surface["length_logits"].unsqueeze(0), target_length ) target_bytes = torch.tensor( list(payload), dtype=torch.long, device=surface["byte_logits"].device ) byte_logits = surface["byte_logits"][: len(payload)] byte_loss = F.cross_entropy(byte_logits, target_bytes) step_ce = length_loss + byte_loss total_ce = total_ce + step_ce byte_losses.append(float(byte_loss.detach().item())) length_losses.append(float(length_loss.detach().item())) n_steps += 1 # Discrete free-run commit (stop-grad) — same decode as chat. with torch.no_grad(): pred_bytes = self.surface.decode( surface, deterministic=True, prefer_printable=True ) current = self.atomizer.packet_from_payload(bytes(pred_bytes)) if n_steps == 0: return self.transition_loss(start, golds[0]) mean_ce = total_ce / float(n_steps) w = float(weight) loss = w * mean_ce mean_byte = sum(byte_losses) / len(byte_losses) mean_len = sum(length_losses) / len(length_losses) out = last_output or {} return loss, { "loss": float(loss.detach().item()), "ce_loss": float(mean_ce.detach().item()), "byte_loss": mean_byte, "length_loss": mean_len, "n_atoms": len(self.core.atoms), "field_norm": float(out.get("field", self.core.state.alpha).detach().norm().item()) if "field" in out else float(self.core.state.alpha.detach().norm().item()), "field_rms_before": float(out.get("field_rms_before", 0.0) or 0.0), "field_rms_after": float(out.get("field_rms_after", 0.0) or 0.0), "field_scale": float(out.get("field_scale", 1.0) or 1.0), "merge_count": int(out.get("merge_count", 0) or 0), "merge_count_total": int(out.get("merge_count_total", self.merge_count_total) or self.merge_count_total), "max_phase_coherence": float(out.get("max_phase_coherence", 0.0) or 0.0), "n_pairs_above_energy_floor": int(out.get("n_pairs_above_energy_floor", 0) or 0), "slow_tick": bool(out.get("slow_tick", True)), "free_run_aux": True, "free_run_horizon": int(n_steps), "free_run_aux_weight": w, "field_contrast_loss": 0.0, "field_persist_loss": 0.0, "field_ignorance_loss": 0.0, "printable_aux_loss": 0.0, "printable_mass_mean": float("nan"), "field_next_packet_loss": 0.0, } @torch.no_grad() def predict_packet( self, packet: AtomPacket, temperature: float = 1.0, top_k: int | None = None, deterministic: bool = True, prefer_printable: bool = True, *, merge_enabled: bool | None = None, ) -> bytes: output = self.forward_packet(packet, merge_enabled=merge_enabled) return self.surface.decode( output["surface"], temperature=temperature, top_k=top_k, deterministic=deterministic, prefer_printable=prefer_printable, ) def generate_packets( self, prompt: str, max_packets: int = 8, temperature: float = 1.0, top_k: int | None = None, deterministic: bool = True, max_length: int | None = None, prefer_printable: bool = True, reset: bool = True, merge_enabled: bool = False, payload_copy: bool = False, dialogue_wrap: bool = True, speech_gate: bool = True, anti_repeat: bool = True, ) -> bytes: """Prime on a prompt and generate bounded atom surface packets.""" self.eval() if self.field_obligatory_hard: self.surface.set_obligatory_hard(True) prefer_printable = True prev_payload_flag = bool(getattr(self.surface, "payload_enabled", True)) self.surface.payload_enabled = bool(payload_copy) try: if reset: self.reset_state(reset_atomizer=True) if dialogue_wrap: prompt = format_dialogue_prompt(prompt) prompt_packets = self.atomizer.encode(prompt, reset=reset) if not prompt_packets: raise ValueError("prompt must produce at least one atom packet") for packet in prompt_packets[:-1]: self.forward_packet(packet, merge_enabled=merge_enabled) current = prompt_packets[-1] generated = bytearray() for _ in range(max_packets): payload = self.predict_packet( current, temperature=temperature, top_k=top_k, deterministic=deterministic, prefer_printable=prefer_printable, merge_enabled=merge_enabled, ) if anti_repeat and payload and _byte_cycle(generated + payload): # N-gram anti-repeat (ARCHITECTURE.md): the new bytes close # a 2-6 byte cycle -> draw once more. RNG state is # saved/restored and the redraw is seeded by position so # deterministic probes stay reproducible. rng_state = torch.get_rng_state() try: torch.manual_seed(0xA700 + len(generated)) payload = self.predict_packet( current, temperature=0.7, top_k=8, deterministic=False, prefer_printable=prefer_printable, merge_enabled=merge_enabled, ) finally: torch.set_rng_state(rng_state) if not payload: break # Byte-tick contract (ARCHITECTURE.md): the speech gate judges # the accumulated phrase, never a single (1-byte) packet. if ( speech_gate and len(generated) >= 8 and not speech_ok(bytes(generated)) ): break generated.extend(payload) current = self.atomizer.packet_from_payload(payload) if max_length is not None and len(generated) >= max_length: break if generated.endswith(b"\n\n") and len(generated) > 2: break if max_length is not None: return bytes(generated[:max_length]) return bytes(generated) finally: self.surface.payload_enabled = prev_payload_flag def _checkpoint(self) -> dict: core = self.core return { "compiler": self.compiler.state_dict(), "surface": self.surface.state_dict(), "core": { "encoder": core.encoder.state_dict(), "state": core.state.get_state_dict(), "dynamics": core.dynamics.state_dict(), "interaction": core.interaction.state_dict(), "aggregation": core.aggregation.state_dict(), "abstraction": core.abstraction.state_dict(), "consolidation": core.consolidation.state_dict(), "production": core.production.state_dict(), "atoms": core.atoms.state_dict(), "energy_history": core.energy_history, "training_loss": core.training_loss, "consolidation_count": core.consolidation_count, "abstraction_count": core.abstraction_count, }, "atomizer": self.atomizer.state_dict(), "config": { "d_model": core.encoder.d_model, "n_modes": core.state.n_modes, "n_atoms_max": core.encoder.n_atoms_max, "max_payload_bytes": self.max_payload_bytes, "atomizer_version": self.atomizer.VERSION, "field_max_rms": self.field_max_rms, "field_leak": float(getattr(self, "field_leak", 0.0) or 0.0), "field_leak_spectrum": ( list(self.field_leak_spectrum) if getattr(self, "field_leak_spectrum", None) is not None else None ), "field_leak_spectrum_gain": str(getattr(self, "field_leak_spectrum_gain", "none")), "field_leak_spectrum_slow_frac": float( getattr(self, "field_leak_spectrum_slow_frac", 1.0) ), "energy_decay_bounds": self.energy_decay_bounds, "enable_merge": self.enable_merge, "merge_coherence_threshold": float(self.merge_coherence_threshold), "merge_energy_floor": float(self.merge_energy_floor), "slow_every": self.slow_every, "field_loss_weight": self.field_loss_weight, "field_contrast_weight": self.field_contrast_weight, "field_contrast_margin": self.field_contrast_margin, "field_ignorance_weight": self.field_ignorance_weight, "field_ignorance_margin": self.field_ignorance_margin, "field_ignorance_ablate_shared": self.field_ignorance_ablate_shared, "field_ignorance_prompt_bank": self.field_ignorance_prompt_bank, "field_obligatory_readout": bool(self.field_obligatory_readout), "field_obligatory_hard": bool(self.field_obligatory_hard), "payload_copy": bool(getattr(self.surface, "payload_enabled", True)), "last_atom_readout": bool(self.last_atom_readout), "last_atom_scale": float(getattr(self.surface, "last_atom_scale", 1.0)), "last_atom_scale_adaptive": bool( getattr(self.surface, "last_atom_scale_adaptive", False) ), "last_atom_scale_min": float( getattr(self.surface, "last_atom_scale_min", 0.0) ), "last_atom_scale_max": float( getattr(self.surface, "last_atom_scale_max", 1.0) ), "field_hard_couple_scale": float( getattr(self.surface, "field_hard_couple_scale", 0.0) ), "last_atom_dropout": float( getattr(self.surface, "last_atom_dropout", 0.0) ), "printable_aux_weight": float(self.printable_aux_weight), "field_next_packet_weight": float(self.field_next_packet_weight), "merge_count_total": self.merge_count_total, }, "field_probe": self.field_probe.state_dict(), "field_next_probe": self.field_next_probe.state_dict(), **self._slow_readout_checkpoint(), **self._bptt_checkpoint(), } def _bptt_checkpoint(self) -> dict: """Extra keys only when --field-bptt / --field-leak-learnable are on (off = checkpoint layout exactly as before).""" out: dict = {} if int(getattr(self, "field_bptt", 0) or 0) > 0: out["field_bptt"] = int(self.field_bptt) if getattr(self, "field_leak_logit", None) is not None: out["field_leak_logit"] = self.field_leak_logit.detach().cpu().clone() if getattr(self, "field_leak_slow_block", None) is not None: out["field_leak_slow_block"] = {k: v for k, v in self.field_leak_slow_block.items() if k != "modes"} return out def _slow_readout_checkpoint(self) -> dict: """Extra checkpoint keys, present only when the slow readout exists (off = checkpoint layout exactly as before).""" sr = getattr(self, "slow_readout", None) if sr is None: return {} return { "slow_readout": sr.state_dict(), "slow_readout_config": { "slow_mode_readout": True, "n_slow": int(sr.n_slow), "slow_idx": [int(i) for i in (self._slow_idx.tolist() if self._slow_idx is not None else [])], "rank": int(sr.rank), "ahat": str(self.slow_readout_ahat), "memory_weight": float(self.slow_memory_weight), "memory_lags": [int(k) for k in self.slow_memory_lags], "memory_target": str(self.slow_memory_target), }, } def save(self, path: str | Path, extra_state: dict | None = None) -> str: checkpoint = self._checkpoint() if extra_state is not None: checkpoint["training"] = extra_state path = str(path) Path(path).parent.mkdir(parents=True, exist_ok=True) torch.save(checkpoint, path) return path @staticmethod def _pad_copy_leading(dst: torch.Tensor, src: torch.Tensor) -> int: """Copy leading rows/elems from src into dst; return rows copied on dim0.""" if dst.ndim == 0 or src.ndim == 0: return 0 n = min(int(dst.shape[0]), int(src.shape[0])) if n <= 0: return 0 if dst.ndim == 1: dst[:n].copy_(src[:n].to(device=dst.device, dtype=dst.dtype)) else: # Match trailing dims; truncate if src wider (should not happen on grow). if dst.shape[1:] != src.shape[1:]: # Best-effort: copy overlapping trailing slice. slices = [slice(0, n)] for d_dim, s_dim in zip(dst.shape[1:], src.shape[1:]): slices.append(slice(0, min(d_dim, s_dim))) dst[tuple(slices)].copy_(src[tuple(slices)].to(device=dst.device, dtype=dst.dtype)) else: dst[:n].copy_(src[:n].to(device=dst.device, dtype=dst.dtype)) return n def _migrate_span_head_weights(self, surface_state: dict) -> dict: """Grow max_payload surface heads: keep prefix weights; init only new rows. Does **not** touch field/core. Used when resuming 16-byte hard ckpt into a larger max_payload (e.g. 32) under hard-v2 α-MLP. """ info = { "span_head_migrated": False, "padded_keys": [], "old_max_payload": None, "new_max_payload": int(self.max_payload_bytes), } new_max = int(self.max_payload_bytes) # Infer old max from length_decoder bias/weight if present. old_len = surface_state.get("length_decoder.bias") if old_len is None: old_len = surface_state.get("length_decoder.weight") if old_len is None: old_len = surface_state.get("alpha_length_frozen") if old_len is None or not hasattr(old_len, "shape"): return info old_max = int(old_len.shape[0]) info["old_max_payload"] = old_max if old_max >= new_max: return info # shrink or equal — filtered load handles equal; shrink rare current = self.surface.state_dict() padded = [] with torch.no_grad(): for key, dst in current.items(): if key not in surface_state: continue src = surface_state[key] if not hasattr(src, "shape") or not hasattr(dst, "shape"): continue if tuple(src.shape) == tuple(dst.shape): continue # Only pad along output (dim0) growth for known span heads. if src.shape[0] >= dst.shape[0]: continue if key.endswith(".fc1.weight") or key.endswith(".fc1.bias"): continue # MLP input layer not payload-sized n = self._pad_copy_leading(dst, src) if n > 0: padded.append(key) # Re-apply padded tensors onto the module. if padded: patch = {k: current[k] for k in padded} self.surface.load_state_dict(patch, strict=False) info["span_head_migrated"] = bool(padded) info["padded_keys"] = padded return info def load(self, path: str | Path) -> dict | None: checkpoint = torch.load(path, map_location="cpu", weights_only=False) self.compiler.load_state_dict(checkpoint["compiler"]) surface_state = checkpoint["surface"] # Legacy checkpoints predate ``state_norm`` and/or field-α readout. # Load matching tensors; activate new field path; damp biases that drown α. legacy_surface = "state_norm.weight" not in surface_state field_readout_missing = "field_to_state.weight" not in surface_state has_alpha_proj = any( key.startswith("alpha_byte_proj") for key in surface_state ) obligatory_missing = (not has_alpha_proj) or ("alpha_jl" not in surface_state) current = self.surface.state_dict() filtered = {key: value for key, value in surface_state.items() if key in current and current[key].shape == value.shape} missing = [key for key in current if key not in filtered] has_la_keys = any(key.startswith("last_atom") for key in surface_state) want_la = getattr(self.surface, "last_atom", None) is not None if has_la_keys and not want_la: print("warning: checkpoint has last-atom weights but model built without last_atom_readout (keys dropped)") if want_la and not has_la_keys: print("info: last_atom_readout on but checkpoint lacks last-atom weights (fresh init kept)") self.surface.load_state_dict(filtered, strict=False) # If max_payload grew (e.g. 16→32), pad-copy span heads before any reinit wipe. span_migrate = self._migrate_span_head_weights(surface_state) if span_migrate.get("span_head_migrated"): # Recompute missing after pad: only truly-absent keys remain "missing". current = self.surface.state_dict() filtered_keys = set(filtered) | set(span_migrate.get("padded_keys") or []) missing = [key for key in current if key not in filtered_keys] mlp_missing = any( key.startswith("alpha_byte_proj") or key.startswith("alpha_length_proj") for key in missing ) def _is_payload_key(key: str) -> bool: return ( key.startswith("byte_embed") or key.startswith("payload_") ) payload_missing = any(_is_payload_key(key) for key in missing) def _is_hard_couple_key(key: str) -> bool: # New opt-in head: must NOT trigger full field-readout reinit # (that would wipe tip field_feat_norm / field_to_state). return key.startswith("field_hard_couple_") non_mlp_missing = [ key for key in missing if not ( key.startswith("alpha_byte_proj") or key.startswith("alpha_length_proj") or key.startswith("last_atom") or _is_payload_key(key) or _is_hard_couple_key(key) ) ] if payload_missing: with torch.no_grad(): self.surface._init_payload_production() couple_missing = any(_is_hard_couple_key(key) for key in missing) if couple_missing: with torch.no_grad(): nn.init.normal_( self.surface.field_hard_couple_byte.weight, mean=0.0, std=0.02 ) nn.init.normal_( self.surface.field_hard_couple_length.weight, mean=0.0, std=0.02 ) if legacy_surface or non_mlp_missing or field_readout_missing: with torch.no_grad(): if legacy_surface or "state_norm.weight" in missing: self.surface.state_norm.reset_parameters() # Shrink decoder bias so field-conditioned Wx / skip can compete. self.surface.byte_decoder.bias.mul_(0.05) self.surface.length_decoder.bias.mul_(0.05) if field_readout_missing or any( ( (key.startswith("field_") and not _is_hard_couple_key(key)) or key in {"skip_gate"} ) for key in missing ): self.surface._init_field_readout() self.surface.field_feat_norm.reset_parameters() # Open skip strongly so migrated ckpts separate logits before retrain. self.surface.skip_gate.fill_(4.0) # _init_field_readout already seeds couple weights; keep them. frozen_alpha_missing = any( key in missing for key in ( "alpha_jl", "alpha_byte_frozen", "alpha_length_frozen", "obl_gate", "obl_mix", ) ) if obligatory_missing or frozen_alpha_missing: with torch.no_grad(): self.surface._init_obligatory_readout() # Slight bias damp so fresh α-only residual is audible on load. if not (legacy_surface or field_readout_missing): self.surface.byte_decoder.bias.mul_(0.5) self.surface.length_decoder.bias.mul_(0.5) elif mlp_missing: # Linear→MLP deepen: keep loaded frozen JL / maps; reinit trainable MLP only. with torch.no_grad(): self.surface._init_alpha_trainable_mlp() core_state = checkpoint["core"] core = self.core core.encoder.load_state_dict(core_state["encoder"]) core.state.load_state_dict(core_state["state"]) core.dynamics.load_state_dict(core_state["dynamics"]) core.interaction.load_state_dict(core_state["interaction"]) core.aggregation.load_state_dict(core_state["aggregation"]) core.abstraction.load_state_dict(core_state["abstraction"]) core.consolidation.load_state_dict(core_state["consolidation"]) core.production.load_state_dict(core_state["production"]) core.atoms.load_state_dict(core_state["atoms"]) core.energy_history = core_state.get("energy_history", []) core.training_loss = core_state.get("training_loss", 0.0) core.consolidation_count = core_state.get("consolidation_count", 0) core.abstraction_count = core_state.get("abstraction_count", 0) self.atomizer.load_state_dict(checkpoint["atomizer"]) if "field_probe" in checkpoint: try: self.field_probe.load_state_dict(checkpoint["field_probe"]) except Exception: pass # feature_dim / d_model drift — keep fresh probe if "field_next_probe" in checkpoint: try: self.field_next_probe.load_state_dict(checkpoint["field_next_probe"]) except Exception: pass cfg = checkpoint.get("config") or {} if "enable_merge" in cfg: self.enable_merge = bool(cfg["enable_merge"]) if "merge_coherence_threshold" in cfg: self.merge_coherence_threshold = float(cfg["merge_coherence_threshold"]) self.core.aggregation.phase_coherence_threshold = self.merge_coherence_threshold if "merge_energy_floor" in cfg: self.merge_energy_floor = float(cfg["merge_energy_floor"]) self.core.aggregation.merge_energy_floor = self.merge_energy_floor if "slow_every" in cfg: self.slow_every = max(1, int(cfg["slow_every"])) if "field_loss_weight" in cfg: self.field_loss_weight = float(cfg["field_loss_weight"]) if "field_contrast_weight" in cfg: self.field_contrast_weight = float(cfg["field_contrast_weight"]) if "field_contrast_margin" in cfg: self.field_contrast_margin = float(cfg["field_contrast_margin"]) if "field_ignorance_weight" in cfg: self.field_ignorance_weight = float(cfg["field_ignorance_weight"]) if "field_ignorance_margin" in cfg: self.field_ignorance_margin = float(cfg["field_ignorance_margin"]) if "field_ignorance_ablate_shared" in cfg: self.field_ignorance_ablate_shared = bool(cfg["field_ignorance_ablate_shared"]) if "field_ignorance_prompt_bank" in cfg: self.field_ignorance_prompt_bank = bool(cfg["field_ignorance_prompt_bank"]) if "field_obligatory_readout" in cfg: self.field_obligatory_readout = bool(cfg["field_obligatory_readout"]) if "printable_aux_weight" in cfg: self.printable_aux_weight = float(cfg["printable_aux_weight"]) if "field_next_packet_weight" in cfg: self.field_next_packet_weight = float(cfg["field_next_packet_weight"]) if "field_obligatory_hard" in cfg and bool(cfg["field_obligatory_hard"]): self.field_obligatory_hard = True self.field_obligatory_readout = True self.surface.set_obligatory_hard(True) else: self.field_obligatory_hard = False self.surface.field_obligatory_hard = False # Constructor / CLI may set obligatory after load; always sync surface. self.surface.field_obligatory_readout = bool(self.field_obligatory_readout) self.merge_count_total = int(cfg.get("merge_count_total", 0) or 0) if "payload_copy" in cfg: self.surface.payload_enabled = bool(cfg["payload_copy"]) # Provenance scale; CLI --last-atom-scale / --last-atom-scale-adaptive # win after load in run_atom_native. if "last_atom_scale" in cfg: self.surface.last_atom_scale = float(cfg["last_atom_scale"]) if "last_atom_scale_adaptive" in cfg: self.surface.last_atom_scale_adaptive = bool(cfg["last_atom_scale_adaptive"]) if "last_atom_scale_min" in cfg: self.surface.last_atom_scale_min = float(cfg["last_atom_scale_min"]) if "last_atom_scale_max" in cfg: self.surface.last_atom_scale_max = float(cfg["last_atom_scale_max"]) if "field_hard_couple_scale" in cfg: self.surface.field_hard_couple_scale = float(cfg["field_hard_couple_scale"]) # Provenance only; CLI --last-atom-dropout wins after load in run_atom_native # (and P is ignored at eval/generation regardless). if "last_atom_dropout" in cfg: self.surface.last_atom_dropout = float(cfg["last_atom_dropout"]) # Field leak changes inference dynamics, so it is restored from the # checkpoint (chat/eval see what was trained); trainer CLI --field-leak # wins after load. Absent key (older ckpts) = 0.0 = legacy. if "field_leak" in cfg: self.field_leak = float(cfg["field_leak"] or 0.0) # Multi-timescale leak spectrum: same restore rule (absent/None = off). if "field_leak_spectrum" in cfg: self.set_field_leak_spectrum( cfg["field_leak_spectrum"], gain=cfg.get("field_leak_spectrum_gain", "none"), slow_frac=cfg.get("field_leak_spectrum_slow_frac", 1.0), ) # Slow-mode readout (after the spectrum): restored with its weights so # chat/eval see the trained head. Absent key = off (trainer CLI wins). src_cfg = checkpoint.get("slow_readout_config") if src_cfg and src_cfg.get("slow_mode_readout") and self.field_leak_spectrum is not None: self.set_slow_mode_readout( True, rank=int(src_cfg.get("rank", 64)), ahat=src_cfg.get("ahat", "exclude"), memory_weight=float(src_cfg.get("memory_weight", 0.0)), memory_lags=src_cfg.get("memory_lags", (16, 32, 64)), memory_target=src_cfg.get("memory_target", "bag"), ) self.slow_readout.load_state_dict(checkpoint["slow_readout"]) elif getattr(self, "slow_readout", None) is not None: self.set_slow_mode_readout(False) # --field-bptt / --field-leak-learnable: restored when present (absent = # off); the trainer CLI wins after load. self.set_field_bptt(int(checkpoint.get("field_bptt", 0) or 0)) if "field_leak_logit" in checkpoint: self.set_field_leak_learnable(True) sb = checkpoint.get("field_leak_slow_block") if sb is not None: self.set_field_leak_slow_block(sb["frac"], cap=sb["cap"], gain=sb.get("gain", "ema"), ref=sb.get("ref"), reinit=False) elif getattr(self, "field_leak_slow_block", None) is not None: self.field_leak_slow_block = None self._slow_block_mask = None self._slow_block_floor = None with torch.no_grad(): self.field_leak_logit.copy_(checkpoint["field_leak_logit"].to(self.field_leak_logit.device)) else: self.set_field_leak_learnable(False) self.field_leak_slow_block = None # Always repair drifted dynamics (e.g. energy_decay~0.001 from 1.05M persist). dynamics_state = self.stabilize_dynamics_parameters() training = checkpoint.get("training") if training is None: training = {} training = dict(training) training["legacy_surface_migrated"] = bool( legacy_surface or bool(non_mlp_missing) or field_readout_missing or bool(span_migrate.get("span_head_migrated")) ) training["alpha_mlp_migrated"] = bool(mlp_missing and not obligatory_missing) training["field_readout_migrated"] = bool(field_readout_missing) training["field_obligatory_migrated"] = bool(obligatory_missing) training["payload_prod_migrated"] = bool(payload_missing) training["span_head_migrated"] = bool(span_migrate.get("span_head_migrated")) training["span_head_migrate_info"] = span_migrate training["dynamics_on_load"] = dynamics_state return training