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Upload Corpus-30M/panels/Xenium_hSkin_v1_metadata.csv with huggingface_hub

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Corpus-30M/panels/Xenium_hSkin_v1_metadata.csv ADDED
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1
+ Genes,Ensembl_ID,Num_Probesets,Codewords,Annotation
2
+ ACER1,ENSG00000167769,8,1,CD4_RGCC
3
+ ACTA2,ENSG00000107796,4,1,Pericytes_1
4
+ ADAM12,ENSG00000148848,8,1,Mesenchymal Fibroblasts
5
+ AHNAK2,ENSG00000185567,8,1,Keratinocytes
6
+ AIF1,ENSG00000204472,7,1,Macrophages and DC_1
7
+ AKR1C1,ENSG00000187134,8,1,TSK
8
+ ALOX5AP,ENSG00000132965,8,1,CD8_naive
9
+ APCDD1,ENSG00000154856,8,1,Secretory-papillary Fibroblasts
10
+ APOD,ENSG00000189058,4,1,Pro-inflammatory Fibroblasts
11
+ AQP1,ENSG00000240583,8,1,Endothelial cells
12
+ AQP3,ENSG00000165272,8,1,EpSC and Other Progenitors_2
13
+ AREG,ENSG00000109321,8,1,EpSC and Other Progenitors_1
14
+ ARHGDIB,ENSG00000111348,8,1,T Cells
15
+ ASPN,ENSG00000106819,8,1,Mesenchymal Fibroblasts; TSK_basal
16
+ ATF3,ENSG00000162772,8,1,Melanoma
17
+ AXL,ENSG00000167601,8,1,DC_CD1C
18
+ BASP1,ENSG00000176788,8,1,Macrophages and DC_2
19
+ BCAN,ENSG00000132692,8,1,Melanocytes
20
+ BHLHE41,ENSG00000123095,8,1,CD4_RGCC
21
+ BIRC3,ENSG00000023445,8,1,DC_CD1C_migrating
22
+ BIRC5,ENSG00000089685,8,1,TSK_cycling
23
+ C11orf96,ENSG00000187479,2,1,Pericytes_1
24
+ C15orf48,ENSG00000166920,6,1,Macrophages and DC_1; Macrophages; DC_Langerhans cells_migrating
25
+ C1QA,ENSG00000173372,4,1,Macrophages
26
+ C1orf54,ENSG00000118292,8,1,DC_CLEC9A; Macrophages and DC_2
27
+ C5AR1,ENSG00000197405,8,1,Macrophages
28
+ CALCRL,ENSG00000064989,8,1,DC_Langerhans cells_migrating
29
+ CALD1,ENSG00000122786,6,1,Myofibroblasts; Pericytes_2
30
+ CAPNS2,ENSG00000256812,8,1,Pilosebaceous cells
31
+ CBFA2T3,ENSG00000129993,8,1,DC_AXL_SIGLEC6
32
+ CCL19,ENSG00000172724,3,1,DC_CLEC9A_migrating; Pro-inflammatory Fibroblasts
33
+ CCL22,ENSG00000102962,8,1,DC_Langerhans cells_migrating; DC
34
+ CCND1,ENSG00000110092,8,1,Melanoma
35
+ CCR7,ENSG00000126353,8,1,DC_CD1C_migrating; DC
36
+ CD1A,ENSG00000158477,8,1,DC_Langerhans cells; Macrophages and DC_3
37
+ CD1B,ENSG00000158485,8,1,DC_Langerhans cells_migrating
38
+ CD3D,ENSG00000167286,5,1,CD8_exhausted; CD4_exhausted; T Cells
39
+ CD3E,ENSG00000198851,8,1,CD4_naive; T Cells
40
+ CD3G,ENSG00000160654,8,1,T Cells
41
+ CD40LG,ENSG00000102245,8,1,CD4_RGCC
42
+ CD52,ENSG00000169442,4,1,CD4_naive; T Cells
43
+ CD68,ENSG00000129226,6,1,Macrophages and DC_1
44
+ CD69,ENSG00000110848,8,1,CD8_naive; CD8_activated; T Cells
45
+ CD79A,ENSG00000105369,4,1,B cells
46
+ CD83,ENSG00000112149,8,1,Macrophages and DC_2
47
+ CD8A,ENSG00000153563,8,1,CD8_exhausted; CD8_EM
48
+ CD93,ENSG00000125810,8,1,Myeloid-derived suppressor cell
49
+ CDC20,ENSG00000117399,6,1,TSK_cycling
50
+ CDH5,ENSG00000179776,8,1,Endothelial cells; Vascular Endothelial Cells
51
+ CDK1,ENSG00000170312,8,1,EpSC and Other Progenitors_2
52
+ CENPF,ENSG00000117724,8,1,Cycling_2
53
+ CES1,ENSG00000198848,8,1,CD8_EMRA
54
+ CLDN1,ENSG00000163347,8,1,DC_Langerhans cells; Langerhans Cells
55
+ CLDN4,ENSG00000189143,8,1,Eccrine cells
56
+ CLDN5,ENSG00000184113,6,1,Endothelial cells; Lymphatic Endothelial Cells
57
+ CLEC10A,ENSG00000132514,8,1,DC_CD1C
58
+ CLEC9A,ENSG00000197992,8,1,DC_CLEC9A; Macrophages and DC_2
59
+ COCH,ENSG00000100473,5,1,Mesenchymal Fibroblasts
60
+ COL17A1,ENSG00000065618,8,1,TSK_basal
61
+ COL5A2,ENSG00000204262,8,1,Mesenchymal Fibroblasts
62
+ COL6A1,ENSG00000142156,8,1,Fibroblasts; Secretory-papillary Fibroblasts
63
+ COL6A2,ENSG00000142173,3,1,Fibroblasts; Secretory-papillary Fibroblasts
64
+ COL6A3,ENSG00000163359,8,1,Fibroblasts; Mesenchymal Fibroblasts
65
+ COTL1,ENSG00000103187,8,1,Macrophages and DC_3
66
+ CPE,ENSG00000109472,8,1,Pericytes_2; T regulatory cells
67
+ CPVL,ENSG00000106066,8,1,DC_CLEC9A; Macrophages and DC_2
68
+ CRABP2,ENSG00000143320,7,1,Pilosebaceous cells
69
+ CRYAB,ENSG00000109846,8,1,Melanocytes
70
+ CTSW,ENSG00000172543,6,1,NK cells
71
+ CTSZ,ENSG00000101160,8,1,Macrophages and DC_2
72
+ CXADR,ENSG00000154639,8,1,TSK_basal
73
+ CXCL12,ENSG00000107562,8,1,Pro-inflammatory Fibroblasts
74
+ CXCR4,ENSG00000121966,8,1,CD8_EM; CD4_naive; T Cells
75
+ CYB561A3,ENSG00000162144,8,1,Melanocytes
76
+ DCT,ENSG00000080166,2,1,Melanocytes
77
+ DEFB1,ENSG00000164825,3,1,Pilosebaceous cells
78
+ DSC1,ENSG00000134765,4,1,Differentiated Keratinocytes
79
+ DST,ENSG00000151914,8,1,EpSC and Other Progenitors_1; TSK_basal
80
+ DUSP2,ENSG00000158050,5,1,CD8_EM
81
+ ECSCR,ENSG00000249751,8,1,Lymphatic Endothelial Cells
82
+ EDNRB,ENSG00000136160,8,1,Melanoma
83
+ ENAH,ENSG00000154380,8,1,TSK_differentiating
84
+ ENPP1,ENSG00000197594,8,1,DC_CLEC9A
85
+ FABP4,ENSG00000170323,8,1,Lymphatic Endothelial Cells
86
+ FAM210B,ENSG00000124098,8,1,Erythrocytes
87
+ FBLN1,ENSG00000077942,5,1,Secretory-reticular Fibroblasts
88
+ FBXO7,ENSG00000100225,8,1,Erythrocytes
89
+ FCER1A,ENSG00000179639,8,1,DC_Langerhans cells; Macrophages and DC_3
90
+ FCER1G,ENSG00000158869,7,1,Macrophages and DC_3
91
+ FGFBP1,ENSG00000137440,8,1,EpSC and Other Progenitors_2
92
+ FKBP8,ENSG00000105701,2,1,Erythrocytes
93
+ FRZB,ENSG00000162998,8,1,Melanocytes
94
+ FSCN1,ENSG00000075618,3,1,DC
95
+ GATA2,ENSG00000179348,8,1,CD8_naive
96
+ GEM,ENSG00000164949,8,1,Pro-inflammatory Fibroblasts
97
+ GIMAP7,ENSG00000179144,8,1,CD4
98
+ GNG11,ENSG00000127920,8,1,Endothelial cells; Lymphatic Endothelial Cells
99
+ GPR157,ENSG00000180758,8,1,DC_CD1C_migrating
100
+ GPR183,ENSG00000169508,5,1,Macrophages and DC_1
101
+ GPR4,ENSG00000177464,8,1,Myofibroblasts
102
+ GYPC,ENSG00000136732,8,1,Erythrocytes
103
+ GZMK,ENSG00000113088,8,1,CD8_EM
104
+ HAPLN1,ENSG00000145681,8,1,Mesenchymal Fibroblasts
105
+ HBD,ENSG00000223609,8,1,Erythrocytes
106
+ HES1,ENSG00000114315,7,1,Basal to Spinous Cells
107
+ HIST1H4C,ENSG00000197061,4,1,EpSC and Other Progenitors_2; T_proliferating
108
+ HMGB2,ENSG00000164104,8,1,Macrophages and DC_3; T_proliferating
109
+ HMGN2,ENSG00000198830,8,1,Macrophages and DC_3
110
+ HTRA1,ENSG00000166033,8,1,Mesenchymal Fibroblasts
111
+ ID2,ENSG00000115738,8,1,Macrophages and DC_2
112
+ ID4,ENSG00000172201,8,1,Pericytes_2
113
+ IDO1,ENSG00000131203,8,1,DC_CLEC9A_migrating; Macrophages and DC_2
114
+ IFI27,ENSG00000165949,2,1,Vascular Endothelial Cells
115
+ IFITM1,ENSG00000185885,5,1,Pericytes_2
116
+ IFNG,ENSG00000111537,8,1,CD4_exhausted; CD8_activated
117
+ IGFBP2,ENSG00000115457,3,1,TSK
118
+ IGFBP3,ENSG00000146674,8,1,Keratinocytes
119
+ IGFBP5,ENSG00000115461,6,1,Secretory-reticular Fibroblasts
120
+ IGFBP7,ENSG00000163453,2,1,Endothelial cells; Myofibroblasts
121
+ IL1B,ENSG00000125538,8,1,Macrophages and DC_1; Myeloid-derived suppressor cell
122
+ IL2RA,ENSG00000134460,8,1,T regulatory cells
123
+ IL32,ENSG00000008517,2,1,T Cells; T regulatory cells; CD4_naive
124
+ IL33,ENSG00000137033,8,1,TSK_differentiating
125
+ IL3RA,ENSG00000185291,8,1,DC_plasmacytoid
126
+ IL4I1,ENSG00000104951,8,1,DC_Langerhans cells_migrating
127
+ INHBA,ENSG00000122641,8,1,Myeloid-derived suppressor cell
128
+ INSIG1,ENSG00000186480,3,1,Macrophages and DC_1
129
+ IRF4,ENSG00000137265,8,1,Macrophages and DC_1
130
+ IRF8,ENSG00000140968,8,1,DC_CLEC9A
131
+ ITGA6,ENSG00000091409,8,1,EpSC and Other Progenitors_1
132
+ ITGB1,ENSG00000150093,8,1,EpSC and Other Progenitors_1
133
+ ITM2A,ENSG00000078596,8,1,CD8_exhausted; CD4_preexhausted
134
+ KIT,ENSG00000157404,8,1,CD8_naive
135
+ KLRB1,ENSG00000111796,8,1,CD4
136
+ KRT15,ENSG00000171346,8,1,EpSC and Other Progenitors_1; TSK_basal; BCC
137
+ KRT18,ENSG00000111057,8,1,Eccrine cells
138
+ KRT2,ENSG00000172867,4,1,Spinous to Granular Cells
139
+ KRT5,ENSG00000186081,3,1,EpSC and Other Progenitors_2
140
+ KRTDAP,ENSG00000188508,1,1,Differentiated Keratinocytes; Pilosebaceous cells; BCC
141
+ LAMB3,ENSG00000196878,8,1,TSK
142
+ LCK,ENSG00000182866,8,1,T Cells
143
+ LENG8,ENSG00000167615,8,1,CD4_RGCC
144
+ LEPR,ENSG00000116678,8,1,Secretory-papillary Fibroblasts
145
+ LGALS2,ENSG00000100079,5,1,DC_CLEC9A; Macrophages and DC_2
146
+ LINC00636,ENSG00000240423,6,1,Lymphatic Endothelial Cells
147
+ LSAMP,ENSG00000185565,8,1,Secretory-papillary Fibroblasts
148
+ LST1,ENSG00000204482,2,1,DC_AXL_SIGLEC6; Macrophages and DC_1
149
+ LTB,ENSG00000227507,2,1,DC_AXL_SIGLEC6; T regulatory cells; T Cells
150
+ LUM,ENSG00000139329,4,1,Fibroblasts
151
+ LY6D,ENSG00000167656,2,1,Differentiated Keratinocytes; Keratinocytes
152
+ LYPD3,ENSG00000124466,5,1,Differentiated Keratinocytes
153
+ LYVE1,ENSG00000133800,8,1,Lymphatic Endothelial Cells
154
+ LYZ,ENSG00000090382,2,1,Macrophages and DC_3
155
+ MAL2,ENSG00000147676,8,1,TSK_differentiating
156
+ MARCKSL1,ENSG00000175130,7,1,DC_CLEC9A_migrating
157
+ MEF2C,ENSG00000081189,8,1,B cells
158
+ MFAP4,ENSG00000166482,7,1,Mesenchymal Fibroblasts
159
+ MFAP5,ENSG00000197614,8,1,Secretory-reticular Fibroblasts
160
+ MGP,ENSG00000111341,8,1,Pro-inflammatory Fibroblasts
161
+ MIR205HG,ENSG00000230937,3,1,EpSC and Other Progenitors_1; TSK_basal
162
+ MITF,ENSG00000187098,8,1,Melanoma
163
+ MKI67,ENSG00000148773,8,1,T_proliferating
164
+ MLANA,ENSG00000120215,2,1,Melanocytes
165
+ MMP2,ENSG00000087245,8,1,Secretory-reticular Fibroblasts
166
+ MMP27,ENSG00000137675,8,1,Secretory-reticular Fibroblasts
167
+ MMRN1,ENSG00000138722,8,1,Lymphatic Endothelial Cells
168
+ MNDA,ENSG00000163563,8,1,DC_CD1C
169
+ MT1F,ENSG00000198417,3,1,CD4
170
+ MT1X,ENSG00000187193,2,1,TSK_cycling
171
+ MYC,ENSG00000136997,8,1,Melanoma
172
+ MYCT1,ENSG00000120279,8,1,Endothelial cells
173
+ MYH11,ENSG00000133392,8,1,Pericytes_1
174
+ MYL9,ENSG00000101335,6,1,Myofibroblasts; Pericytes_1
175
+ MZB1,ENSG00000170476,6,1,B cells; Erythrocytes
176
+ NDUFA4L2,ENSG00000185633,3,1,Myofibroblasts; Pericytes_2
177
+ NLGN4Y,ENSG00000165246,8,1,CD4_RGCC
178
+ NMB,ENSG00000197696,2,1,CD4_preexhausted
179
+ NOTCH3,ENSG00000074181,8,1,Spinous to Granular Cells
180
+ NR2F2,ENSG00000185551,8,1,Pericytes_2
181
+ NR4A2,ENSG00000153234,8,1,CD8_activated
182
+ NSG1,ENSG00000168824,8,1,Melanocytes
183
+ NUSAP1,ENSG00000137804,8,1,EpSC and Other Progenitors_2
184
+ PBXIP1,ENSG00000163346,8,1,CD4
185
+ PCDH7,ENSG00000169851,8,1,Keratinocytes
186
+ PDGFRA,ENSG00000134853,8,1,Fibroblasts
187
+ PKHD1L1,ENSG00000205038,8,1,B cells
188
+ PKIB,ENSG00000135549,8,1,DC_AXL_SIGLEC6
189
+ PLAC9,ENSG00000189129,3,1,Secretory-reticular Fibroblasts
190
+ PLP1,ENSG00000123560,8,1,Melanoma
191
+ PLVAP,ENSG00000130300,8,1,Endothelial cells
192
+ PMEL,ENSG00000185664,4,1,Melanocytes
193
+ POSTN,ENSG00000133110,8,1,Fibroblasts; Mesenchymal Fibroblasts
194
+ PROX1,ENSG00000117707,8,1,Lymphatic Endothelial Cells
195
+ PTGDS,ENSG00000107317,5,1,Secretory-papillary Fibroblasts
196
+ PTGER3,ENSG00000050628,8,1,DC_Langerhans cells
197
+ PTGR1,ENSG00000106853,8,1,TSK_cycling
198
+ PTN,ENSG00000105894,8,1,Pilosebaceous cells
199
+ PTPRCAP,ENSG00000213402,2,1,CD4_RGCC; T Cells
200
+ PTTG1,ENSG00000164611,8,1,EpSC and Other Progenitors_2; TSK_cycling
201
+ QPCT,ENSG00000115828,8,1,Melanocytes
202
+ RAMP2,ENSG00000131477,4,1,Endothelial cells
203
+ RASSF8,ENSG00000123094,8,1,CD8_naive
204
+ RGCC,ENSG00000102760,5,1,DC_CLEC9A; CD8_activated
205
+ RGS1,ENSG00000090104,8,1,Macrophages and DC_2
206
+ RGS5,ENSG00000143248,4,1,CD4_preexhausted; Myofibroblasts; Pericytes_2
207
+ RHOV,ENSG00000104140,5,1,TSK_differentiating
208
+ RNASE1,ENSG00000129538,6,1,Endothelial cells; Macrophages
209
+ RRM2,ENSG00000171848,8,1,T_proliferating
210
+ S100A13,ENSG00000189171,3,1,TSK_cycling
211
+ S100A14,ENSG00000189334,4,1,EpSC and Other Progenitors_2
212
+ S100B,ENSG00000160307,8,1,DC_AXL_SIGLEC6; Macrophages and DC_2
213
+ SELE,ENSG00000007908,8,1,Endothelial cells; Vascular Endothelial Cells
214
+ SERPINB2,ENSG00000197632,8,1,EpSC and Other Progenitors_1
215
+ SERPINB5,ENSG00000206075,8,1,Keratinocytes; BCC
216
+ SFRP1,ENSG00000104332,8,1,TSK_basal
217
+ SFRP2,ENSG00000145423,8,1,Secretory-papillary Fibroblasts
218
+ SLC25A37,ENSG00000147454,8,1,Erythrocytes
219
+ SLC25A39,ENSG00000013306,7,1,Erythrocytes
220
+ SLC2A3,ENSG00000059804,8,1,CD8_activated
221
+ SLC8A1,ENSG00000183023,8,1,DC_AXL_SIGLEC6
222
+ SLPI,ENSG00000124107,5,1,Secretory-reticular Fibroblasts
223
+ SNCA,ENSG00000145335,8,1,Erythrocytes
224
+ SOD3,ENSG00000109610,3,1,Secretory-papillary Fibroblasts
225
+ SOSTDC1,ENSG00000171243,8,1,Pilosebaceous cells
226
+ SOX15,ENSG00000129194,4,1,TSK_cycling
227
+ SOX17,ENSG00000164736,8,1,Vascular Endothelial Cells
228
+ SPARCL1,ENSG00000152583,8,1,Endothelial cells; Vascular Endothelial Cells
229
+ SPRY1,ENSG00000164056,8,1,Vascular Endothelial Cells
230
+ STMN1,ENSG00000117632,8,1,Macrophages and DC_3; T_proliferating
231
+ STRADB,ENSG00000082146,8,1,Erythrocytes
232
+ SYNPO2,ENSG00000172403,8,1,DC_CLEC9A_migrating
233
+ TACSTD2,ENSG00000184292,4,1,EpSC and Other Progenitors_1
234
+ TAGLN,ENSG00000149591,4,1,Myofibroblasts; Pericytes_1
235
+ TFAP2A,ENSG00000137203,8,1,TSK_basal
236
+ TFAP2B,ENSG00000008196,8,1,Melanocytes
237
+ TFF3,ENSG00000160180,3,1,Endothelial cells; Lymphatic Endothelial Cells
238
+ TFPI,ENSG00000003436,8,1,Lymphatic Endothelial Cells
239
+ TFPI2,ENSG00000105825,8,1,DC_CLEC9A_migrating
240
+ THBS2,ENSG00000186340,8,1,TSK_basal
241
+ THY1,ENSG00000154096,8,1,Mesenchymal Fibroblasts
242
+ TM4SF1,ENSG00000169908,3,1,Endothelial cells; Pilosebaceous cells; Vascular Endothelial Cells
243
+ TMEM150C,ENSG00000249242,8,1,DC_CD1C_migrating
244
+ TMEM176A,ENSG00000002933,8,1,DC_CD1C_migrating
245
+ TMEM45A,ENSG00000181458,4,1,Pilosebaceous cells
246
+ TNFRSF17,ENSG00000048462,8,1,B cells; Erythrocytes
247
+ TOP2A,ENSG00000131747,8,1,Cycling_2
248
+ TP63,ENSG00000073282,8,1,EpSC and Other Progenitors_1
249
+ TRPM1,ENSG00000134160,8,1,Melanocytes
250
+ TSC22D1,ENSG00000102804,8,1,Vascular Endothelial Cells
251
+ TSPAN33,ENSG00000158457,8,1,Macrophages and DC_1
252
+ TUBB2B,ENSG00000137285,8,1,DC_CLEC9A_migrating
253
+ TYMS,ENSG00000176890,8,1,Cycling_1; T_proliferating
254
+ TYR,ENSG00000077498,8,1,Melanocytes; Melanoma
255
+ TYROBP,ENSG00000011600,3,1,Macrophages and DC_1
256
+ TYRP1,ENSG00000107165,3,1,Melanocytes
257
+ UBE2C,ENSG00000175063,4,1,T_proliferating
258
+ VIM,ENSG00000026025,2,1,Fibroblasts
259
+ VWF,ENSG00000110799,8,1,Endothelial cells; Vascular Endothelial Cells
260
+ WDFY4,ENSG00000128815,8,1,DC_CLEC9A
261
+ ZNF667-AS1,ENSG00000166770,8,1,NK cells