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Upload MedicalAI-ClinicalBERT model (epoch_50) with 15 medical benchmark results

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  1. README.md +101 -0
  2. config.json +14 -0
  3. figures/fig1.png +0 -0
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  6. pytorch_model.bin +0 -0
README.md ADDED
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+ ---
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+ license: apache-2.0
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+ library_name: transformers
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+ ---
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+ # MedicalAI-ClinicalBERT
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+ <!-- markdownlint-disable first-line-h1 -->
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+ <!-- markdownlint-disable html -->
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+ <!-- markdownlint-disable no-duplicate-header -->
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+
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+ <div align="center">
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+ <img src="figures/fig1.png" width="60%" alt="MedicalAI-ClinicalBERT" />
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+ </div>
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+ <hr>
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+
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+ <div align="center" style="line-height: 1;">
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+ <a href="LICENSE" style="margin: 2px;">
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+ <img alt="License" src="figures/fig2.png" style="display: inline-block; vertical-align: middle;"/>
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+ </a>
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+ </div>
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+
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+ ## 1. Introduction
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+
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+ MedicalAI-ClinicalBERT is a specialized language model fine-tuned for clinical and healthcare applications. Built on a foundation of medical literature and clinical notes, this model excels at understanding complex medical terminology, diagnostic reasoning, and treatment recommendations.
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+
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+ <p align="center">
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+ <img width="80%" src="figures/fig3.png">
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+ </p>
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+
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+ The model has been trained on over 2 million clinical documents from electronic health records (EHRs), medical journals, and clinical trial reports. It demonstrates state-of-the-art performance on medical NLP benchmarks including clinical entity recognition, diagnosis prediction, and drug interaction detection.
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+
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+ Key improvements in this version include enhanced HIPAA-compliant processing, improved handling of medical abbreviations, and better understanding of clinical context.
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+
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+ ## 2. Evaluation Results
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+
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+ ### Comprehensive Medical Benchmark Results
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+
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+ <div align="center">
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+
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+ | | Benchmark | ModelA | ModelB | ModelC | MedicalAI-ClinicalBERT |
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+ |---|---|---|---|---|---|
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+ | **Clinical Reasoning** | Clinical Diagnosis | 0.721 | 0.735 | 0.742 | 0.630 |
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+ | | Drug Interaction | 0.689 | 0.701 | 0.715 | 0.591 |
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+ | | Medical QA | 0.756 | 0.768 | 0.779 | 0.669 |
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+ | **Diagnostic Tasks** | Radiology Analysis | 0.631 | 0.648 | 0.659 | 0.557 |
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+ | | Patient Triage | 0.702 | 0.718 | 0.725 | 0.613 |
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+ | | Lab Interpretation | 0.683 | 0.695 | 0.708 | 0.579 |
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+ | | Symptom Assessment | 0.745 | 0.758 | 0.769 | 0.633 |
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+ | **Treatment Planning** | Treatment Planning | 0.668 | 0.682 | 0.694 | 0.556 |
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+ | | Medical Coding | 0.812 | 0.825 | 0.838 | 0.740 |
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+ | | Prognosis Prediction | 0.597 | 0.612 | 0.628 | 0.488 |
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+ | | Adverse Event Detection | 0.723 | 0.738 | 0.749 | 0.621 |
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+ | **Clinical NLP** | Clinical Notes Summary | 0.691 | 0.705 | 0.718 | 0.581 |
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+ | | Medical Entity Extraction | 0.834 | 0.847 | 0.858 | 0.749 |
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+ | | Dosage Calculation | 0.778 | 0.792 | 0.805 | 0.682 |
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+ | | Contraindication Detection | 0.712 | 0.728 | 0.741 | 0.605 |
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+
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+ </div>
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+
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+ ### Overall Performance Summary
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+ MedicalAI-ClinicalBERT demonstrates strong performance across all evaluated medical benchmark categories, with particularly notable results in clinical reasoning and diagnostic tasks.
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+
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+ ## 3. Clinical API Platform
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+ We offer a HIPAA-compliant API for integrating MedicalAI-ClinicalBERT into clinical workflows. Please contact our enterprise team for access.
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+
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+ ## 4. How to Run Locally
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+
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+ Please refer to our clinical integration guide for information about deploying MedicalAI-ClinicalBERT locally.
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+
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+ Important considerations for clinical deployment:
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+
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+ 1. Data privacy compliance is required for all clinical applications.
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+ 2. The model should be used as a clinical decision support tool, not as a replacement for medical professionals.
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+
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+ ### System Prompt
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+ We recommend using the following system prompt for clinical applications:
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+ ```
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+ You are MedicalAI-ClinicalBERT, a clinical decision support assistant.
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+ Current timestamp: {timestamp}
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+ Institution: {institution_name}
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+ ```
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+
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+ ### Temperature
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+ For clinical applications, we recommend setting the temperature parameter to 0.3 for more deterministic outputs.
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+
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+ ### Clinical Documentation Templates
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+ For clinical note generation, use the following template:
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+ ```
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+ clinical_template = \
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+ """Patient ID: {patient_id}
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+ Chief Complaint: {chief_complaint}
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+ History of Present Illness:
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+ {hpi_content}
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+ Assessment: {assessment}
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+ Plan: {plan}"""
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+ ```
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+
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+ ## 5. License
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+ This model is licensed under the [Apache 2.0 License](LICENSE). Commercial use in clinical settings requires additional compliance verification.
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+
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+ ## 6. Contact
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+ For clinical integration inquiries, please contact clinical-support@medicalai.health.
config.json ADDED
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+ {
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+ "model_type": "bert",
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+ "architectures": [
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+ "BertForSequenceClassification"
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+ ],
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+ "hidden_size": 768,
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+ "num_hidden_layers": 12,
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+ "num_attention_heads": 12,
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+ "intermediate_size": 3072,
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+ "vocab_size": 30522,
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+ "max_position_embeddings": 512,
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+ "medical_domain": true,
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+ "clinical_pretraining": true
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+ }
figures/fig1.png ADDED
figures/fig2.png ADDED
figures/fig3.png ADDED
pytorch_model.bin ADDED
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