original_code/compute_logits.py

import torch
import supervised as s
import numpy as np
import data384 as data
import time
import os
import sys

def do_computation(wavlist_file, modelfile, speciesfile, outdir):
    species = data.read_filelist(speciesfile)
    nspecies = len(species)
    filelist = data.read_filelist(wavlist_file)
    n = len(filelist)
    device=torch.device('cpu')
    model=s.Net(nclasses=nspecies)
    model.load_state_dict(torch.load(modelfile, map_location=device))

    for wavfile in filelist:
        print(f'wavfile {wavfile}')
        dat = data.wav2spectrograms(wavfile)
        oname = os.path.basename(wavfile)
        # if dat is long, use s.classify1_cpu instead of s.classify_cpu so that memory is not exceeded
        logits = s.classify1_cpu(dat,model,nspecies)
        # logits = s.classify_cpu(dat,model)
        np.savetxt(outdir + '/' + oname + '.logits',logits,fmt='%.2f')

    return n    
        
def main(args):
    wavlist_file = args[0]
    modelfile = args[1]
    speciesfile = args[2]
    outdir = args[3]

    starttime=time.time()
    n = do_computation(wavlist_file, modelfile, speciesfile, outdir)
    endtime=time.time()
    print(f'Computation of logits for {n} wavfiles done. Runtime {endtime-starttime:.1f} seconds')   
    return 0

if __name__=="__main__":
    main(sys.argv[1:])