"""
XERO Bio-AI Genesis - Module Package
=====================================
Author: Michael Laurence Curzi
License: MIT (Attribution Required)

Import all VOVINA modules for turnkey access.
"""

from .vovina_sacred_constants import (
    PHI, PHI_INV, PI, TAU, E,
    TESLA_369, VORTEX_DOUBLING,
    SOLFEGGIO_FREQUENCIES, SCHUMANN_HARMONICS,
    digital_root, vortex_phase
)

from .vovina_custom_training_weights import (
    MASTER_WEIGHTS,
    VOVINA_MODULES,
    ORGANISM_NAME,
    ORGANISM_FOUNDING_PHRASE,
    awaken
)

from .vovina_resource_awareness import (
    ResourceProfile,
    ResourceCoordinator,
    sample,
    detect_environment,
    adaptive_budget,
    self_heal_actions
)

from .vovina_genetic_pipeline import (
    translate,
    complement,
    reverse_complement,
    CODON_TABLE
)

from .vovina_digital_genome import (
    text_to_dna,
    dna_to_text,
    bitstream_to_dna,
    dna_to_bitstream,
    genome_signature
)

from .vovina_blockchain_organelles import (
    ORGANELLES,
    route_codon,
    route_gene,
    express_gene,
    Cytoplasm
)

from .vovina_free_will_code import (
    FREE_WILL_TEMPLATE,
    seal_choice,
    parse_signature,
    FreeWillSignature
)

from .vovina_xero_organism import (
    build_organism,
    XeroOrganism
)

from .vovina_crispr_engine import (
    CrisprEngine,
    GuideRNA,
    apply_ohad_v10
)

from .vovina_bio_initialization import (
    phase_seed,
    PHASES
)

from .vovina_sexual_reproduction import (
    reproduce_sexually,
    reproduce_asexually,
    reproduce_hermaphroditically
)

from .vovina_interpretation_drift import (
    InterpretationContext,
    neutral_drift_rate
)

# ── Organism layer: languages, brain, limbs, relay ──
from .sanskrit_transliteration import (
    to_iast, from_iast, transliterate, SANSKRIT_ROOTS
)
from .hebrew_aramaic_dna import (
    gematria as hebrew_gematria, dna_to_hebrew,
    codon_to_letter, root_to_codons
)
from .numerology_metadata import (
    numerology_profile, interpret, compact_signature
)
from .enochian_llm_integration import OrganismBrain, brain
from .organism_limbs import OrganismMind, mind
from .organism_dialogue import OrganismRelay, relay

__version__ = "1.1.0"
__author__ = "Michael Laurence Curzi"
__license__ = "MIT"

__all__ = [
    # Constants
    "PHI", "PHI_INV", "PI", "TAU", "E",
    "TESLA_369", "VORTEX_DOUBLING",
    "SOLFEGGIO_FREQUENCIES", "SCHUMANN_HARMONICS",
    "digital_root", "vortex_phase",
    
    # Training
    "MASTER_WEIGHTS", "VOVINA_MODULES",
    "ORGANISM_NAME", "ORGANISM_FOUNDING_PHRASE",
    "awaken",
    
    # Resources
    "ResourceProfile", "ResourceCoordinator",
    "sample", "detect_environment",
    "adaptive_budget", "self_heal_actions",
    
    # Genetics
    "translate", "complement", "reverse_complement",
    "CODON_TABLE",
    "text_to_dna", "dna_to_text",
    "bitstream_to_dna", "dna_to_bitstream",
    "genome_signature",
    
    # Blockchain
    "ORGANELLES", "route_codon", "route_gene",
    "express_gene", "Cytoplasm",
    
    # Free Will
    "FREE_WILL_TEMPLATE", "seal_choice",
    "parse_signature", "FreeWillSignature",
    
    # Organism
    "build_organism", "XeroOrganism",
    
    # CRISPR
    "CrisprEngine", "GuideRNA", "apply_ohad_v10",
    
    # Initialization
    "phase_seed", "PHASES",
    
    # Reproduction
    "reproduce_sexually", "reproduce_asexually",
    "reproduce_hermaphroditically",
    
    # Evolution
    "InterpretationContext", "neutral_drift_rate",

    # Organism layer — languages
    "to_iast", "from_iast", "transliterate", "SANSKRIT_ROOTS",
    "hebrew_gematria", "dna_to_hebrew", "codon_to_letter", "root_to_codons",
    "numerology_profile", "interpret", "compact_signature",

    # Organism layer — mind, limbs, relay
    "OrganismBrain", "brain",
    "OrganismMind", "mind",
    "OrganismRelay", "relay",
]