mDeepFRI / DeepCNN-MERGED_mf_model_params.json
Valentyn Bezshapkin
Rename DeepCNN-MERGED_molecular_function_model_params.json to DeepCNN-MERGED_mf_model_params.json
f2e00e5
{
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256,
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],
"filter_lens": [
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],
"dropout": 0.3,
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"epochs": 60,
"batch_size": 64,
"pad_len": null,
"ontology": "mf",
"model_name": "./trained_models/DeepCNN-MERGED_molecular_function",
"lm_model_name": null,
"train_tfrecord_fn": "/mnt/ceph/users/vgligorijevic/ContactMaps/DeepFRI2.0_TFRecords/*_GO_train",
"valid_tfrecord_fn": "/mnt/ceph/users/vgligorijevic/ContactMaps/DeepFRI2.0_TFRecords/*_GO_valid",
"annot_fn": "/mnt/ceph/users/vgligorijevic/ContactMaps/DeepFRI2.0_data/nrPDB-GO_annot.tsv",
"test_list": "/mnt/ceph/users/vgligorijevic/ContactMaps/DeepFRI2.0_data/nrPDB-GO_test.csv",
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"GO:0019904",
"GO:0004521",
"GO:0016410",
"GO:0097367",
"GO:0001216",
"GO:0008649",
"GO:0060589",
"GO:0030276",
"GO:0048018",
"GO:0019888",
"GO:0008047",
"GO:1904047",
"GO:0004930",
"GO:0000156",
"GO:0016985",
"GO:0005254",
"GO:0016840",
"GO:0071949",
"GO:0004557",
"GO:0035091",
"GO:0009982",
"GO:0004731",
"GO:0003924",
"GO:0022803",
"GO:0004032",
"GO:0048306",
"GO:0030546",
"GO:0008409",
"GO:0001530",
"GO:0004180",
"GO:1904680",
"GO:2001070",
"GO:0008477",
"GO:0005261",
"GO:0035064",
"GO:0031072",
"GO:0008237",
"GO:0003746",
"GO:0015450",
"GO:0016832",
"GO:0015631",
"GO:0004556",
"GO:0016773",
"GO:0019838",
"GO:0016423",
"GO:0042393",
"GO:0008810",
"GO:0016597",
"GO:0002020",
"GO:0140296",
"GO:0048030",
"GO:0036361"
],
"gonames": [
"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity",
"bile acid binding",
"calcium-dependent phospholipid binding",
"transmembrane receptor protein serine/threonine kinase activity",
"enzyme inhibitor activity",
"endo-1,4-beta-xylanase activity",
"ribosomal large subunit binding",
"beta-glucosidase activity",
"thioredoxin-disulfide reductase activity",
"chemokine activity",
"endopeptidase activity",
"glutaminase activity",
"kinase activity",
"translation release factor activity",
"3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity",
"oxidoreductase activity, acting on CH-OH group of donors",
"cysteine-type peptidase activity",
"SNARE binding",
"hydrolase activity, hydrolyzing O-glycosyl compounds",
"purine ribonucleoside binding",
"histone-lysine N-methyltransferase activity",
"channel activity",
"oxidoreductase activity, acting on a sulfur group of donors",
"phosphoglycerate mutase activity",
"receptor regulator activity",
"small GTPase binding",
"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential",
"calcium-release channel activity",
"inorganic anion transmembrane transporter activity",
"ubiquitin-like protein ligase binding",
"TBP-class protein binding",
"demethylase activity",
"glutathione-disulfide reductase activity",
"DNA topoisomerase activity",
"active transmembrane transporter activity",
"protein disulfide isomerase activity",
"endopeptidase regulator activity",
"racemase and epimerase activity, acting on carbohydrates and derivatives",
"oxidoreductase activity, acting on NAD(P)H",
"ATPase binding",
"chitin binding",
"cyclin-dependent protein serine/threonine kinase regulator activity",
"ATPase regulator activity",
"omega peptidase activity",
"ribonuclease activity",
"ribonucleoside binding",
"retinoid binding",
"thiol-dependent ubiquitin-specific protease activity",
"enoyl-CoA hydratase activity",
"ligand-gated cation channel activity",
"signaling receptor binding",
"transition metal ion binding",
"structural molecule activity",
"acid-amino acid ligase activity",
"catalytic activity, acting on DNA",
"peptide-lysine-N-acetyltransferase activity",
"3'-5' DNA helicase activity",
"amidine-lyase activity",
"sequence-specific DNA binding",
"transporter activity",
"regulatory region nucleic acid binding",
"2 iron, 2 sulfur cluster binding",
"small ribosomal subunit rRNA binding",
"steroid hydroxylase activity",
"transmembrane receptor protein tyrosine kinase activity",
"DNA-directed 5'-3' RNA polymerase activity",
"structural constituent of nuclear pore",
"L-aspartate:2-oxoglutarate aminotransferase activity",
"4 iron, 4 sulfur cluster binding",
"isocitrate dehydrogenase (NADP+) activity",
"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor",
"transferase activity, transferring glycosyl groups",
"exodeoxyribonuclease activity",
"L-lactate dehydrogenase activity",
"purine nucleotide binding",
"tRNA methyltransferase activity",
"guanyl nucleotide binding",
"serine-type peptidase activity",
"uridylyltransferase activity",
"ubiquitinyl hydrolase activity",
"alcohol dehydrogenase (NADP+) activity",
"cyclase activity",
"single-stranded RNA binding",
"siderophore transmembrane transporter activity",
"terpene synthase activity",
"peptidase inhibitor activity",
"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides",
"oligopeptide binding",
"dihydrofolate reductase activity",
"DNA polymerase activity",
"DNA-binding transcription repressor activity",
"calcium channel regulator activity",
"peptidyl-prolyl cis-trans isomerase activity",
"monooxygenase activity",
"GTPase activator activity",
"photoreceptor activity",
"4-hydroxy-tetrahydrodipicolinate reductase",
"snRNA binding",
"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)",
"nucleoside diphosphate kinase activity",
"dihydropteroate synthase activity",
"lipid binding",
"oxidoreductase activity, acting on other nitrogenous compounds as donors",
"ion gated channel activity",
"molybdenum ion binding",
"abscisic acid binding",
"ribonucleoside-diphosphate reductase activity",
"protein serine phosphatase activity",
"ABC-type transporter activity",
"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",
"molecular function regulator",
"exodeoxyribonuclease activity, producing 5'-phosphomonoesters",
"acetyl-CoA C-acyltransferase activity",
"beta-lactamase activity",
"structural constituent of cytoskeleton",
"cytoskeletal protein binding",
"siderophore uptake transmembrane transporter activity",
"heparin binding",
"aspartic-type peptidase activity",
"guanyl-nucleotide exchange factor activity",
"NADPH binding",
"protein-macromolecule adaptor activity",
"phosphatase inhibitor activity",
"exoribonuclease activity, producing 5'-phosphomonoesters",
"catalytic activity, acting on a rRNA",
"glucosyltransferase activity",
"antiporter activity",
"O-acyltransferase activity",
"NAD(P)H dehydrogenase (quinone) activity",
"protein serine/threonine kinase activity",
"biotin binding",
"organic acid binding",
"hypoxanthine phosphoribosyltransferase activity",
"RNA-directed 5'-3' RNA polymerase activity",
"chromatin binding",
"polysaccharide binding",
"cytochrome-c oxidase activity",
"glucosidase activity",
"mannosidase activity",
"inorganic diphosphatase activity",
"translation initiation factor binding",
"enzyme binding",
"aminoacyl-tRNA hydrolase activity",
"kinase inhibitor activity",
"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor",
"L-malate dehydrogenase activity",
"oxidoreductase activity, acting on peroxide as acceptor",
"cyclic-di-GMP binding",
"adenyl ribonucleotide binding",
"protein-arginine N-methyltransferase activity",
"DNA N-glycosylase activity",
"heme-copper terminal oxidase activity",
"histone deacetylase binding",
"carbon-nitrogen ligase activity, with glutamine as amido-N-donor",
"rRNA N-glycosylase activity",
"methyltransferase activity",
"nucleotide diphosphatase activity",
"fructose-bisphosphate aldolase activity",
"ligase activity, forming carbon-sulfur bonds",
"7S RNA binding",
"p53 binding",
"AMP binding",
"succinate dehydrogenase activity",
"protein dimerization activity",
"transferase activity, transferring acyl groups other than amino-acyl groups",
"phosphopantetheine-dependent carrier activity",
"iron ion binding",
"phosphatase binding",
"guanyl ribonucleotide binding",
"cobalamin binding",
"ATPase activity",
"myosin binding",
"5,10-methylenetetrahydrofolate-dependent methyltransferase activity",
"protein folding chaperone",
"sodium channel regulator activity",
"beta-galactosidase activity",
"mRNA (guanine-N7-)-methyltransferase activity",
"cyclohydrolase activity",
"glucokinase activity",
"ion transmembrane transporter activity",
"motor activity",
"tRNA-specific ribonuclease activity",
"voltage-gated potassium channel activity",
"phosphorelay sensor kinase activity",
"peptidoglycan binding",
"phospholipid binding",
"3-oxoacyl-[acyl-carrier-protein] synthase activity",
"GABA receptor activity",
"ligand-gated ion channel activity",
"ion channel inhibitor activity",
"symporter activity",
"transcription factor binding",
"transmembrane signaling receptor activity",
"intramolecular oxidoreductase activity, transposing S-S bonds",
"anion transmembrane transporter activity",
"diphosphotransferase activity",
"telomeric DNA binding",
"acid-ammonia (or amide) ligase activity",
"hydroquinone:oxygen oxidoreductase activity",
"cis-trans isomerase activity",
"ligase activity",
"protein kinase inhibitor activity",
"NAD binding",
"ligase activity, forming carbon-carbon bonds",
"prosthetic group binding",
"ATPase-coupled cation transmembrane transporter activity",
"phosphoribosylanthranilate isomerase activity",
"G protein-coupled receptor binding",
"S-adenosylmethionine-dependent methyltransferase activity",
"protein tyrosine kinase activity",
"ferrous iron binding",
"voltage-gated cation channel activity",
"protein threonine kinase activity",
"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen",
"aldo-keto reductase (NADP) activity",
"tRNA (adenine) methyltransferase activity",
"efflux transmembrane transporter activity",
"oligosaccharide binding",
"G-protein beta/gamma-subunit complex binding",
"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters",
"histone acetyltransferase activity",
"ribonucleotide binding",
"G protein-coupled amine receptor activity",
"serine-type endopeptidase inhibitor activity",
"carbohydrate phosphatase activity",
"ligase activity, forming phosphoric ester bonds",
"hydrolase activity, hydrolyzing N-glycosyl compounds",
"RNA polymerase II-specific DNA-binding transcription factor binding",
"host cell surface receptor binding",
"triose-phosphate isomerase activity",
"hydrolase activity, acting on acid halide bonds",
"protein tag",
"GTP binding",
"penicillin binding",
"glucose-6-phosphate isomerase activity",
"carbonate dehydratase activity",
"ferroxidase activity",
"actin monomer binding",
"mannose binding",
"transferase activity, transferring amino-acyl groups",
"adenylyltransferase activity",
"sterol binding",
"growth factor activity",
"antigen binding",
"oxidoreductase activity, acting on CH or CH2 groups",
"arginine binding",
"nickel cation binding",
"single-stranded DNA helicase activity",
"uridylate kinase activity",
"sodium channel inhibitor activity",
"protein self-association",
"double-stranded RNA binding",
"C-acetyltransferase activity",
"hormone receptor binding",
"serine-type endopeptidase activity",
"glutathione binding",
"cytokine receptor binding",
"amyloid-beta binding",
"N-acetyl-beta-D-galactosaminidase activity",
"ligand-activated transcription factor activity",
"NAD+ binding",
"drug binding",
"endodeoxyribonuclease activity, producing 5'-phosphomonoesters",
"ATPase activator activity",
"adenylate kinase activity",
"galactosidase activity",
"thioredoxin peroxidase activity",
"macromolecule transmembrane transporter activity",
"glycine hydroxymethyltransferase activity",
"alpha-L-arabinofuranosidase activity",
"[acyl-carrier-protein] S-malonyltransferase activity",
"CCR chemokine receptor binding",
"carboxylic ester hydrolase activity",
"host cell surface binding",
"oxidoreductase activity, oxidizing metal ions, oxygen as acceptor",
"steroid dehydrogenase activity",
"endoribonuclease activity, producing 3'-phosphomonoesters",
"DNA helicase activity",
"purine ribonucleotide binding",
"immunoglobulin binding",
"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor",
"N-acetyltransferase activity",
"NAD+ synthase activity",
"1,4-alpha-oligoglucan phosphorylase activity",
"protein serine/threonine/tyrosine kinase activity",
"U3 snoRNA binding",
"RNA methyltransferase activity",
"phosphoric ester hydrolase activity",
"transcription regulator activity",
"growth factor receptor binding",
"cysteine-type endopeptidase inhibitor activity",
"protein serine/threonine kinase inhibitor activity",
"glutathione transferase activity",
"microtubule motor activity",
"cyclo-ligase activity",
"DNA replication origin binding",
"protein homodimerization activity",
"hydrolase activity, acting on ester bonds",
"glutathione peroxidase activity",
"transferase activity, transferring hexosyl groups",
"monosaccharide binding",
"adenosine deaminase activity",
"phospholipase A2 activity consuming 1,2-dioleoylphosphatidylethanolamine)",
"transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer",
"damaged DNA binding",
"amylase activity",
"holo-[acyl-carrier-protein] synthase activity",
"Hsp90 protein binding",
"ubiquitin-like protein binding",
"RNA polymerase II complex binding",
"phospholipase A2 activity (consuming 1,2-dipalmitoylphosphatidylcholine)",
"fibroblast growth factor receptor binding",
"DNA-methyltransferase activity",
"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides",
"protein phosphatase binding",
"transaminase activity",
"catalase activity",
"racemase and epimerase activity",
"RNA polymerase III activity",
"molybdopterin cofactor binding",
"inorganic cation transmembrane transporter activity",
"protein transporter activity",
"aldehyde dehydrogenase (NAD+) activity",
"phospholipase A2 activity",
"proton transmembrane transporter activity",
"cytokine activity",
"manganese ion binding",
"NAD+ synthase (glutamine-hydrolyzing) activity",
"RNA polymerase binding",
"potassium ion binding",
"cytidylyltransferase activity",
"beta-N-acetylhexosaminidase activity",
"oxidoreductase activity, acting on a heme group of donors",
"inositol phosphate phosphatase activity",
"sigma factor activity",
"RNA polymerase II transcription regulatory region sequence-specific DNA binding",
"ligand-gated channel activity",
"macrolide binding",
"phosphatase regulator activity",
"DNA-(apurinic or apyrimidinic site) endonuclease activity",
"hydrolase activity, acting on ether bonds",
"threonine-type endopeptidase activity",
"alpha-sialidase activity",
"nuclear import signal receptor activity",
"5S rRNA binding",
"protein disulfide oxidoreductase activity",
"intramolecular oxidoreductase activity, interconverting aldoses and ketoses",
"double-stranded DNA binding",
"5'-3' RNA polymerase activity",
"snoRNA binding",
"RNA polymerase activity",
"dUTP diphosphatase activity",
"DNA ligase (ATP) activity",
"quinone binding",
"peptide N-acetyltransferase activity",
"ligand-gated calcium channel activity",
"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances",
"extracellular ligand-gated ion channel activity",
"protein kinase activator activity",
"transferase activity, transferring one-carbon groups",
"phosphatidylinositol-4,5-bisphosphate binding",
"isopeptidase activity",
"nutrient reservoir activity",
"ribonucleoprotein complex binding",
"oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor",
"N-acetylmuramoyl-L-alanine amidase activity",
"intramolecular transferase activity",
"transferase activity, transferring alkyl or aryl (other than methyl) groups",
"iron-sulfur cluster binding",
"immunoglobulin receptor binding",
"CoA hydrolase activity",
"purine nucleoside binding",
"histone methyltransferase activity (H3-K4 specific)",
"transferase activity, transferring phosphorus-containing groups",
"D-alanine-D-alanine ligase activity",
"glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity",
"carboxy-lyase activity",
"hydrolase activity, acting on acid halide bonds, in C-halide compounds",
"transmitter-gated ion channel activity",
"phosphopantetheine binding",
"organic anion transmembrane transporter activity",
"translation termination factor activity",
"glutamate receptor activity",
"ubiquitin-like protein ligase activity",
"integrin binding",
"voltage-gated channel activity",
"aminoacyl-tRNA ligase activity",
"dihydrolipoyl dehydrogenase activity",
"ligase activity, forming carbon-oxygen bonds",
"C-acyltransferase activity",
"isoprenoid binding",
"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor",
"chitinase activity",
"thiamine pyrophosphate binding",
"adenosylhomocysteine nucleosidase activity",
"lactate dehydrogenase activity",
"nuclear hormone receptor binding",
"malonyltransferase activity",
"L-ascorbic acid binding",
"GDP binding",
"carbohydrate binding",
"NADH dehydrogenase (quinone) activity",
"NADH dehydrogenase (ubiquinone) activity",
"cell adhesion molecule binding",
"carbon-carbon lyase activity",
"guanine phosphoribosyltransferase activity",
"methylation-dependent protein binding",
"voltage-gated calcium channel activity",
"cyclosporin A binding",
"NADP+ binding",
"carbon-oxygen lyase activity",
"alcohol dehydrogenase (NAD+) activity",
"toxin activity",
"voltage-gated ion channel activity",
"NADH binding",
"nucleoside-triphosphatase activity",
"acyl-CoA binding",
"racemase and epimerase activity, acting on amino acids and derivatives",
"transferase activity, transferring aldehyde or ketonic groups",
"lysine N-methyltransferase activity",
"carbon-sulfur lyase activity",
"oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor",
"intramolecular oxidoreductase activity",
"rRNA binding",
"signaling receptor activity",
"unfolded protein binding",
"exonuclease activity",
"histone methyltransferase activity",
"thiol oxidase activity",
"aldehyde dehydrogenase [NAD(P)+] activity",
"cis-regulatory region sequence-specific DNA binding",
"protein C-terminus binding",
"oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor",
"pyrophosphate hydrolysis-driven proton transmembrane transporter activity",
"nitrite reductase (NO-forming) activity",
"signaling adaptor activity",
"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor",
"protein-containing complex binding",
"carbohydrate kinase activity",
"endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters",
"nucleosome binding",
"cysteine-type endopeptidase activity",
"protein tyrosine/serine/threonine phosphatase activity",
"neurotransmitter receptor activity",
"fatty-acyl-CoA binding",
"protein tyrosine kinase binding",
"hormone binding",
"odorant binding",
"long-chain fatty acid transporter activity",
"sulfurtransferase activity",
"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism",
"sugar transmembrane transporter activity",
"transcription regulatory region sequence-specific DNA binding",
"3'-5'-exoribonuclease activity",
"tetrapyrrole binding",
"intramolecular oxidoreductase activity, transposing C=C bonds",
"phosphoprotein binding",
"deoxyribonuclease activity",
"tyrosine-tRNA ligase activity",
"alcohol dehydrogenase [NAD(P)+] activity",
"RNA polymerase II general transcription initiation factor activity",
"exoribonuclease activity",
"vitamin binding",
"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor",
"ether hydrolase activity",
"threonine-type peptidase activity",
"sulfuric ester hydrolase activity",
"rRNA (guanine) methyltransferase activity",
"protein kinase binding",
"deaminase activity",
"NADP binding",
"oxidoreductase activity, acting on the aldehyde or oxo group of donors",
"transferase activity, transferring acyl groups",
"coreceptor activity",
"ATPase-coupled ion transmembrane transporter activity",
"helicase activity",
"serine-type D-Ala-D-Ala carboxypeptidase activity",
"prenyltransferase activity",
"5'-nucleotidase activity",
"transmitter-gated channel activity",
"pyridoxal phosphate binding",
"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen",
"deaminated base DNA N-glycosylase activity",
"intracellular ligand-gated ion channel activity",
"aminopeptidase activity",
"transcription corepressor activity",
"triglyceride lipase activity",
"ubiquitin protein ligase binding",
"chemokine receptor binding",
"proteasome-activating ATPase activity",
"GTPase regulator activity",
"chromatin DNA binding",
"identical protein binding",
"active ion transmembrane transporter activity",
"methylthioadenosine nucleosidase activity",
"transmembrane transporter activity",
"calcium ion binding",
"oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor",
"type II site-specific deoxyribonuclease activity",
"DNA-directed DNA polymerase activity",
"O-methyltransferase activity",
"succinyltransferase activity",
"retinal binding",
"hydrolase activity, acting on glycosyl bonds",
"guanylyltransferase activity",
"structural constituent of ribosome",
"peptide receptor activity",
"immune receptor activity",
"organic acid transmembrane transporter activity",
"transcription coactivator activity",
"mRNA binding",
"cytidine deaminase activity",
"aspartic-type endopeptidase activity",
"exo-alpha-sialidase activity",
"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines",
"UDP-glycosyltransferase activity",
"syntaxin binding",
"thiolester hydrolase activity",
"CoA carboxylase activity",
"DNA-dependent ATPase activity",
"metallocarboxypeptidase activity",
"basal transcription machinery binding",
"phospholipase activity",
"phosphoglycerate kinase activity",
"flavin adenine dinucleotide binding",
"hydro-lyase activity",
"glycosaminoglycan binding",
"metal cluster binding",
"acyl-CoA dehydrogenase activity",
"G protein-coupled peptide receptor activity",
"ADP binding",
"ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor",
"protein-disulfide reductase activity",
"semaphorin receptor activity",
"phosphoprotein phosphatase activity",
"cytokine binding",
"chlorophyll binding",
"magnesium ion binding",
"3'-5' exonuclease activity",
"toxic substance binding",
"cytokine receptor activity",
"endopeptidase inhibitor activity",
"sulfur compound transmembrane transporter activity",
"oxidoreductase activity, oxidizing metal ions",
"double-stranded RNA-specific ribonuclease activity",
"hydrolase activity, acting on acid anhydrides",
"GTPase binding",
"gated channel activity",
"RNA cap binding",
"glutathione disulfide oxidoreductase activity",
"tryptophan-tRNA ligase activity",
"postsynaptic neurotransmitter receptor activity",
"dipeptidase activity",
"O-acetyltransferase activity",
"maltose binding",
"aminoacyl-tRNA editing activity",
"purine ribonucleoside triphosphate binding",
"protein kinase A binding",
"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds",
"xylanase activity",
"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor",
"translation regulator activity",
"ion channel regulator activity",
"nucleoside kinase activity",
"cholesterol binding",
"protein methyltransferase activity",
"acetyl-CoA carboxylase activity",
"secondary active transmembrane transporter activity",
"transferase activity, transferring nitrogenous groups",
"deacetylase activity",
"methyl indole-3-acetate esterase activity",
"modified amino acid binding",
"ubiquitin conjugating enzyme activity",
"DNA primase activity",
"nucleoside-triphosphate diphosphatase activity",
"ferredoxin-NADP+ reductase activity",
"FMN binding",
"DNA-binding transcription factor activity",
"carboxylic acid binding",
"peptidase regulator activity",
"amide transmembrane transporter activity",
"recombinase activity",
"kinase regulator activity",
"single-stranded DNA binding",
"oxaloacetate decarboxylase activity",
"beta-ketoacyl-acyl-carrier-protein synthase III activity",
"3-oxo-pimeloyl-[acp] methyl ester reductase activity",
"nucleoside monophosphate kinase activity",
"endodeoxyribonuclease activity, producing 3'-phosphomonoesters",
"protein histidine kinase activity",
"transferase activity, transferring alkylthio groups",
"ribonuclease III activity",
"kinase binding",
"extracellular matrix binding",
"2-oxoglutarate-dependent dioxygenase activity",
"beta-tubulin binding",
"hydrolase activity, acting on acid carbon-carbon bonds",
"ATPase-coupled transmembrane transporter activity",
"mRNA 5'-UTR binding",
"acid-thiol ligase activity",
"rRNA (adenine) methyltransferase activity",
"cation transmembrane transporter activity",
"oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor",
"ribosome binding",
"ornithine carbamoyltransferase activity",
"proton-transporting ATP synthase activity, rotational mechanism",
"malate dehydrogenase activity",
"enoyl-[acyl-carrier-protein] reductase (NADH) activity",
"oxidoreductase activity, acting on the CH-CH group of donors",
"restriction endodeoxyribonuclease activity",
"molecular transducer activity",
"RNA helicase activity",
"scopolin beta-glucosidase activity",
"amino-acid racemase activity",
"chloride transmembrane transporter activity",
"phosphorus-oxygen lyase activity",
"superoxide dismutase activity",
"cyclic-nucleotide phosphodiesterase activity",
"dioxygenase activity",
"channel regulator activity",
"protein heterodimerization activity",
"glutamate receptor binding",
"alkali metal ion binding",
"ribose-5-phosphate isomerase activity",
"alanine racemase activity",
"amide binding",
"oxo-acid-lyase activity",
"peptide disulfide oxidoreductase activity",
"potassium channel activity",
"excitatory extracellular ligand-gated ion channel activity",
"metalloendopeptidase activity",
"microtubule binding",
"nitrite reductase activity",
"peptide deformylase activity",
"ubiquitin-like protein conjugating enzyme activity",
"oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor",
"serine-type exopeptidase activity",
"phosphotransferase activity, phosphate group as acceptor",
"S-methyltransferase activity",
"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor",
"indole-3-glycerol-phosphate synthase activity",
"protein phosphatase inhibitor activity",
"cellulose binding",
"ubiquitin-protein transferase activity",
"tRNA binding",
"3-oxo-glutaryl-[acp] methyl ester reductase activity",
"DNA binding",
"peptidase activator activity",
"3',5'-cyclic-nucleotide phosphodiesterase activity",
"endonuclease activity",
"adenyl nucleotide binding",
"antioxidant activity",
"ammonia-lyase activity",
"thymidylate synthase activity",
"phosphate ion binding",
"vitamin B6 binding",
"glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity",
"phosphotransferase activity, carboxyl group as acceptor",
"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor",
"fatty acid synthase activity",
"protein tyrosine phosphatase activity",
"transcription coregulator activity",
"protein N-terminus binding",
"enterobactin binding",
"ACP phosphopantetheine attachment site binding",
"ribulose-bisphosphate carboxylase activity",
"zinc ion binding",
"acid phosphatase activity",
"sulfur compound binding",
"cysteine synthase activity",
"exopeptidase activity",
"mRNA (nucleoside-2'-O-)-methyltransferase activity",
"transmembrane receptor protein kinase activity",
"UDP-glucosyltransferase activity",
"actin filament binding",
"modification-dependent protein binding",
"acyl-CoA hydrolase activity",
"hydroxymethyl-, formyl- and related transferase activity",
"ubiquitin protein ligase activity",
"oxidoreductase activity, acting on hydrogen as donor",
"chorismate mutase activity",
"nucleotidase activity",
"cobalt ion binding",
"protein kinase regulator activity",
"4-hydroxy-tetrahydrodipicolinate synthase activity",
"acetyltransferase activity",
"fatty acid derivative binding",
"ferric iron binding",
"ribosomal small subunit binding",
"catalytic activity, acting on a protein",
"tumor necrosis factor receptor superfamily binding",
"mRNA methyltransferase activity",
"amidase activity",
"nucleoside binding",
"nucleocytoplasmic carrier activity",
"peptidase activity",
"RNA glycosylase activity",
"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor",
"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor",
"transferase activity, transferring sulfur-containing groups",
"peptide alpha-N-acetyltransferase activity",
"phospholipid transporter activity",
"calcium channel activity",
"sulfotransferase activity",
"ionotropic glutamate receptor activity",
"haptoglobin binding",
"CoA-ligase activity",
"general transcription initiation factor activity",
"sodium ion transmembrane transporter activity",
"calmodulin binding",
"kinase activator activity",
"ribonuclease P activity",
"carbohydrate transmembrane transporter activity",
"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen",
"nucleobase-containing compound kinase activity",
"phosphoric diester hydrolase activity",
"lyase activity",
"phosphatase activity",
"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity",
"protein serine/threonine kinase activator activity",
"arginine N-methyltransferase activity",
"phosphotransferase activity, for other substituted phosphate groups",
"translation regulator activity, nucleic acid binding",
"collagen binding",
"organic hydroxy compound transmembrane transporter activity",
"proton-transporting ATPase activity, rotational mechanism",
"hexosaminidase activity",
"3'-5'-exodeoxyribonuclease activity",
"isocitrate dehydrogenase activity",
"ATP-dependent peptidase activity",
"amine-lyase activity",
"ferredoxin-NAD(P) reductase activity",
"fructose 1,6-bisphosphate 1-phosphatase activity",
"tryptophan synthase activity",
"cargo receptor activity",
"potassium ion transmembrane transporter activity",
"DNA polymerase processivity factor activity",
"proton channel activity",
"alcohol binding",
"cyclic nucleotide binding",
"peptide binding",
"DNA translocase activity",
"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines",
"scavenger receptor activity",
"serine hydrolase activity",
"isomerase activity",
"metal ion transmembrane transporter activity",
"beta-mannosidase activity",
"beta-catenin binding",
"DNA-binding transcription factor binding",
"enoyl-[acyl-carrier-protein] reductase activity",
"catalytic activity, acting on RNA",
"non-membrane spanning protein tyrosine kinase activity",
"intramolecular transferase activity, phosphotransferases",
"rRNA (adenine-N6,N6-)-dimethyltransferase activity",
"lipid transfer activity",
"lipid transporter activity",
"phosphopyruvate hydratase activity",
"electron transfer activity",
"primary active transmembrane transporter activity",
"DNA ligase activity",
"ubiquitin-like protein transferase activity",
"phospholipase C activity",
"sequence-specific double-stranded DNA binding",
"protein kinase activity",
"MAP kinase activity",
"mRNA 3'-UTR binding",
"ubiquitin-like modifier activating enzyme activity",
"intramolecular lyase activity",
"porin activity",
"catalytic activity, acting on a tRNA",
"RNA-DNA hybrid ribonuclease activity",
"tumor necrosis factor receptor binding",
"protein-lysine N-methyltransferase activity",
"oxidoreductase activity, acting on the CH-NH group of donors",
"protein transmembrane transporter activity",
"RNA binding",
"sugar-phosphatase activity",
"nuclease activity",
"oxidoreductase activity, acting on iron-sulfur proteins as donors",
"oxygen binding",
"channel inhibitor activity",
"N-methyltransferase activity",
"copper ion binding",
"phosphatidylinositol phosphate binding",
"ubiquinol-cytochrome-c reductase activity",
"alpha-amylase activity (releasing maltohexaose)",
"3 iron, 4 sulfur cluster binding",
"hormone activity",
"peroxiredoxin activity",
"metalloaminopeptidase activity",
"monosaccharide transmembrane transporter activity",
"basal RNA polymerase II transcription machinery binding",
"core promoter sequence-specific DNA binding",
"S-malonyltransferase activity",
"large ribosomal subunit rRNA binding",
"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen",
"cadherin binding",
"ATP binding",
"molecular carrier activity",
"ion channel binding",
"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor",
"3-dehydroquinate dehydratase activity",
"nucleotidyltransferase activity",
"uracil DNA N-glycosylase activity",
"anion channel activity",
"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen",
"protein serine kinase activity",
"transferase activity, transferring pentosyl groups",
"NAD+ ADP-ribosyltransferase activity",
"transition metal ion transmembrane transporter activity",
"transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential",
"shikimate 3-dehydrogenase (NADP+) activity",
"hexokinase activity",
"acyl carrier activity",
"pyrophosphatase activity",
"carboxylic acid transmembrane transporter activity",
"heme binding",
"disordered domain specific binding",
"phosphotransferase activity, nitrogenous group as acceptor",
"small molecule sensor activity",
"peroxidase activity",
"oxidoreductase activity, acting on the CH-NH2 group of donors",
"peptidoglycan muralytic activity",
"steroid binding",
"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor",
"carbohydrate derivative transmembrane transporter activity",
"lipase activity",
"oxidoreductase activity, acting on superoxide radicals as acceptor",
"translation initiation factor activity",
"calcium ion transmembrane transporter activity",
"metalloexopeptidase activity",
"NADH dehydrogenase activity",
"carboxyl- or carbamoyltransferase activity",
"monocarboxylic acid binding",
"translation factor activity, RNA binding",
"xenobiotic transmembrane transporter activity",
"wide pore channel activity",
"endoribonuclease activity, producing 5'-phosphomonoesters",
"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides",
"ammonia ligase activity",
"protein phosphorylated amino acid binding",
"3-hydroxyacyl-CoA dehydrogenase activity",
"actin binding",
"disulfide oxidoreductase activity",
"carbon-oxygen lyase activity, acting on phosphates",
"RNA polymerase core enzyme binding",
"S-acyltransferase activity",
"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor",
"glucose binding",
"phosphatidylinositol bisphosphate binding",
"electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity",
"ligase activity, forming carbon-nitrogen bonds",
"fatty acid binding",
"amino acid kinase activity",
"structural constituent of eye lens",
"protein serine/threonine phosphatase activity",
"dipeptidyl-peptidase activity",
"serine-type carboxypeptidase activity",
"coenzyme-B sulfoethylthiotransferase activity",
"thiosulfate sulfurtransferase activity",
"signal sequence binding",
"enzyme regulator activity",
"ion channel activity",
"inorganic molecular entity transmembrane transporter activity",
"phosphofructokinase activity",
"RNA polymerase II cis-regulatory region sequence-specific DNA binding",
"lysozyme activity",
"molecular adaptor activity",
"receptor tyrosine kinase binding",
"protein threonine phosphatase activity",
"carbon-oxygen lyase activity, acting on polysaccharides",
"exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters",
"CoA-transferase activity",
"ferredoxin hydrogenase activity",
"chaperone binding",
"endodeoxyribonuclease activity",
"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor",
"IMP dehydrogenase activity",
"nicotinate-nucleotide diphosphorylase (carboxylating) activity",
"purine phosphoribosyltransferase activity",
"orotidine-5'-phosphate decarboxylase activity",
"class I DNA-(apurinic or apyrimidinic site) endonuclease activity",
"ubiquitin binding",
"oxygen carrier activity",
"DNA-binding transcription factor activity, RNA polymerase II-specific",
"oxidoreductase activity, acting on diphenols and related substances as donors",
"nuclear receptor activity",
"calcium activated cation channel activity",
"pre-mRNA binding",
"protein domain specific binding",
"endoribonuclease activity",
"N-acyltransferase activity",
"carbohydrate derivative binding",
"DNA-binding transcription activator activity",
"rRNA methyltransferase activity",
"nucleoside-triphosphatase regulator activity",
"clathrin binding",
"receptor ligand activity",
"protein phosphatase regulator activity",
"enzyme activator activity",
"S-adenosyl-L-methionine binding",
"G protein-coupled receptor activity",
"phosphorelay response regulator activity",
"mannan endo-1,4-beta-mannosidase activity",
"chloride channel activity",
"carbon-nitrogen lyase activity",
"FAD binding",
"alpha-galactosidase activity",
"phosphatidylinositol binding",
"pseudouridine synthase activity",
"purine-nucleoside phosphorylase activity",
"GTPase activity",
"passive transmembrane transporter activity",
"alditol:NADP+ 1-oxidoreductase activity",
"calcium-dependent protein binding",
"signaling receptor activator activity",
"5'-3' exonuclease activity",
"lipopolysaccharide binding",
"carboxypeptidase activity",
"peptide transmembrane transporter activity",
"starch binding",
"purine nucleosidase activity",
"cation channel activity",
"methylated histone binding",
"heat shock protein binding",
"metallopeptidase activity",
"translation elongation factor activity",
"P-P-bond-hydrolysis-driven protein transmembrane transporter activity",
"aldehyde-lyase activity",
"tubulin binding",
"alpha-amylase activity",
"phosphotransferase activity, alcohol group as acceptor",
"growth factor binding",
"tRNA (guanine) methyltransferase activity",
"histone binding",
"cellulase activity",
"amino acid binding",
"protease binding",
"general transcription initiation factor binding",
"disaccharide binding",
"racemase activity, acting on amino acids and derivatives"
]
}