Update README.md
Browse files
README.md
CHANGED
|
@@ -1,11 +1,31 @@
|
|
| 1 |
---
|
| 2 |
-
|
| 3 |
-
|
|
|
|
| 4 |
metrics:
|
| 5 |
- f1
|
| 6 |
-
-
|
| 7 |
-
-
|
| 8 |
-
|
| 9 |
-
|
| 10 |
-
|
| 11 |
-
---
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
---
|
| 2 |
+
base_model: InstaDeepAI/nucleotide-transformer-v2-100m-multi-species
|
| 3 |
+
tags:
|
| 4 |
+
- generated_from_trainer
|
| 5 |
metrics:
|
| 6 |
- f1
|
| 7 |
+
model-index:
|
| 8 |
+
- name: vedantM/NucArg_ShortRead
|
| 9 |
+
results: []
|
| 10 |
+
---
|
| 11 |
+
|
| 12 |
+
# nucleotide-transformer-finetuned-lora-NucleotideTransformer
|
| 13 |
+
|
| 14 |
+
This model is a fine-tuned version of [InstaDeepAI/nucleotide-transformer-v2-100m-multi-species](https://huggingface.co/InstaDeepAI/nucleotide-transformer-v2-100m-multi-species) on the NucArg dataset.
|
| 15 |
+
It achieves the following results on the evaluation set:
|
| 16 |
+
- Loss: 0.675450
|
| 17 |
+
- F1: 0.823285
|
| 18 |
+
- Recall: 0.824769
|
| 19 |
+
- Precision: 0.822969
|
| 20 |
+
|
| 21 |
+
## Training hyperparameters
|
| 22 |
+
|
| 23 |
+
The following hyperparameters were used during training:
|
| 24 |
+
- learning_rate: 0.000025
|
| 25 |
+
- train_batch_size: 32
|
| 26 |
+
- gradient_accumulation_steps= 8
|
| 27 |
+
- eval_batch_size: 32
|
| 28 |
+
- seed: 42
|
| 29 |
+
- lr_scheduler_type: linear
|
| 30 |
+
- training_epoch: 4
|
| 31 |
+
|