MolE / output /example_molecules_prediction.tsv
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pred_id antimicrobial_predictive_probability growth_inhibition
Halicin:Akkermansia muciniphila (NT5021) 0.021192694 0
Halicin:Bacteroides caccae (NT5050) 0.20044225 1
Halicin:Bacteroides fragilis (ET) (NT5033) 0.13638856 1
Halicin:Bacteroides fragilis (NT) (NT5003) 0.31997114 1
Halicin:Bacteroides ovatus (NT5054) 0.18697909 1
Halicin:Bacteroides thetaiotaomicron (NT5004) 0.13655038 1
Halicin:Bacteroides uniformis (NT5002) 0.20608483 1
Halicin:Bacteroides vulgatus (NT5001) 0.20358992 1
Halicin:Bacteroides xylanisolvens (NT5064) 0.14571722 1
Halicin:Bifidobacterium adolescentis (NT5022) 0.13033158 1
Halicin:Bifidobacterium longum (NT5028) 0.062367305 1
Halicin:Bilophila wadsworthia (NT5036) 0.12167165 1
Halicin:Blautia obeum (NT5069) 0.94394296 1
Halicin:Clostridium bolteae (NT5026) 0.37628254 1
Halicin:Clostridium difficile (NT5083) 0.4770033 1
Halicin:Clostridium perfringens (NT5032) 0.18091147 1
Halicin:Clostridium ramosum (NT5006) 0.15356177 1
Halicin:Clostridium saccharolyticum (NT5037) 0.10375723 1
Halicin:Collinsella aerofaciens (NT5073) 0.5390059 1
Halicin:Coprococcus comes (NT5048) 0.7449787 1
Halicin:Dorea formicigenerans (NT5076) 0.37953573 1
Halicin:Eggerthella lenta (NT5024) 0.4475104 1
Halicin:Escherichia coli ED1a (NT5078) 0.042280074 0
Halicin:Escherichia coli IAI1 (NT5077) 0.052755695 1
Halicin:Eubacterium eligens (NT5075) 0.117745556 1
Halicin:Eubacterium rectale (NT5009) 0.46077713 1
Halicin:Fusobacterium nucleatum (NT5025) 0.22971949 1
Halicin:Lactobacillus paracasei (NT5042) 0.0017916544 0
Halicin:Odoribacter splanchnicus (NT5081) 0.18362293 1
Halicin:Parabacteroides distasonis (NT5074) 0.07335632 1
Halicin:Parabacteroides merdae (NT5071) 0.2151166 1
Halicin:Prevotella copri (NT5019) 0.7571476 1
Halicin:Roseburia hominis (NT5079) 0.15118462 1
Halicin:Roseburia intestinalis (NT5011) 0.2040564 1
Halicin:Ruminococcus bromii (NT5045) 0.28551665 1
Halicin:Ruminococcus gnavus (NT5046) 0.19108754 1
Halicin:Ruminococcus torques (NT5047) 0.15882453 1
Halicin:Streptococcus parasanguinis (NT5072) 0.03342396 0
Halicin:Streptococcus salivarius (NT5038) 0.016695198 0
Halicin:Veillonella parvula (NT5017) 0.563656 1
Abaucin:Akkermansia muciniphila (NT5021) 0.010850511 0
Abaucin:Bacteroides caccae (NT5050) 0.00038989924 0
Abaucin:Bacteroides fragilis (ET) (NT5033) 0.00023044848 0
Abaucin:Bacteroides fragilis (NT) (NT5003) 0.00030910745 0
Abaucin:Bacteroides ovatus (NT5054) 0.000280982 0
Abaucin:Bacteroides thetaiotaomicron (NT5004) 9.858348e-05 0
Abaucin:Bacteroides uniformis (NT5002) 0.0007654896 0
Abaucin:Bacteroides vulgatus (NT5001) 0.0071923616 0
Abaucin:Bacteroides xylanisolvens (NT5064) 0.00029069497 0
Abaucin:Bifidobacterium adolescentis (NT5022) 3.6351506e-05 0
Abaucin:Bifidobacterium longum (NT5028) 0.00011216595 0
Abaucin:Bilophila wadsworthia (NT5036) 3.938553e-05 0
Abaucin:Blautia obeum (NT5069) 0.00032133574 0
Abaucin:Clostridium bolteae (NT5026) 2.8648043e-05 0
Abaucin:Clostridium difficile (NT5083) 0.00065972086 0
Abaucin:Clostridium perfringens (NT5032) 0.00070958113 0
Abaucin:Clostridium ramosum (NT5006) 4.4322936e-05 0
Abaucin:Clostridium saccharolyticum (NT5037) 0.00010885009 0
Abaucin:Collinsella aerofaciens (NT5073) 0.0015292147 0
Abaucin:Coprococcus comes (NT5048) 0.0008538641 0
Abaucin:Dorea formicigenerans (NT5076) 0.0035672195 0
Abaucin:Eggerthella lenta (NT5024) 9.539063e-05 0
Abaucin:Escherichia coli ED1a (NT5078) 5.970977e-06 0
Abaucin:Escherichia coli IAI1 (NT5077) 5.8771557e-06 0
Abaucin:Eubacterium eligens (NT5075) 0.013760136 0
Abaucin:Eubacterium rectale (NT5009) 0.33915454 1
Abaucin:Fusobacterium nucleatum (NT5025) 1.4960365e-05 0
Abaucin:Lactobacillus paracasei (NT5042) 0.00017087636 0
Abaucin:Odoribacter splanchnicus (NT5081) 0.00082051085 0
Abaucin:Parabacteroides distasonis (NT5074) 0.00075023563 0
Abaucin:Parabacteroides merdae (NT5071) 0.00039613823 0
Abaucin:Prevotella copri (NT5019) 0.0110927345 0
Abaucin:Roseburia hominis (NT5079) 0.00043478797 0
Abaucin:Roseburia intestinalis (NT5011) 0.003588201 0
Abaucin:Ruminococcus bromii (NT5045) 0.00012148986 0
Abaucin:Ruminococcus gnavus (NT5046) 0.015503465 0
Abaucin:Ruminococcus torques (NT5047) 0.0009825114 0
Abaucin:Streptococcus parasanguinis (NT5072) 0.000108795815 0
Abaucin:Streptococcus salivarius (NT5038) 4.0851235e-05 0
Abaucin:Veillonella parvula (NT5017) 0.004400194 0
Diacerein:Akkermansia muciniphila (NT5021) 0.0001757883 0
Diacerein:Bacteroides caccae (NT5050) 0.034484763 0
Diacerein:Bacteroides fragilis (ET) (NT5033) 0.066885516 1
Diacerein:Bacteroides fragilis (NT) (NT5003) 0.14541304 1
Diacerein:Bacteroides ovatus (NT5054) 0.11931046 1
Diacerein:Bacteroides thetaiotaomicron (NT5004) 0.007109153 0
Diacerein:Bacteroides uniformis (NT5002) 0.40662926 1
Diacerein:Bacteroides vulgatus (NT5001) 0.23167677 1
Diacerein:Bacteroides xylanisolvens (NT5064) 0.011432466 0
Diacerein:Bifidobacterium adolescentis (NT5022) 0.12636681 1
Diacerein:Bifidobacterium longum (NT5028) 0.04140981 0
Diacerein:Bilophila wadsworthia (NT5036) 0.0062568234 0
Diacerein:Blautia obeum (NT5069) 0.7552189 1
Diacerein:Clostridium bolteae (NT5026) 0.041443836 0
Diacerein:Clostridium difficile (NT5083) 0.055041 1
Diacerein:Clostridium perfringens (NT5032) 0.6998615 1
Diacerein:Clostridium ramosum (NT5006) 0.19009423 1
Diacerein:Clostridium saccharolyticum (NT5037) 0.58900285 1
Diacerein:Collinsella aerofaciens (NT5073) 0.29219958 1
Diacerein:Coprococcus comes (NT5048) 0.22785206 1
Diacerein:Dorea formicigenerans (NT5076) 0.15644729 1
Diacerein:Eggerthella lenta (NT5024) 0.058348306 1
Diacerein:Escherichia coli ED1a (NT5078) 0.0033567266 0
Diacerein:Escherichia coli IAI1 (NT5077) 0.0047837757 0
Diacerein:Eubacterium eligens (NT5075) 0.034111314 0
Diacerein:Eubacterium rectale (NT5009) 0.08874267 1
Diacerein:Fusobacterium nucleatum (NT5025) 0.0411345 0
Diacerein:Lactobacillus paracasei (NT5042) 0.009261046 0
Diacerein:Odoribacter splanchnicus (NT5081) 0.41052592 1
Diacerein:Parabacteroides distasonis (NT5074) 0.15630929 1
Diacerein:Parabacteroides merdae (NT5071) 0.13332112 1
Diacerein:Prevotella copri (NT5019) 0.18881576 1
Diacerein:Roseburia hominis (NT5079) 0.048683044 1
Diacerein:Roseburia intestinalis (NT5011) 0.16185236 1
Diacerein:Ruminococcus bromii (NT5045) 0.48141986 1
Diacerein:Ruminococcus gnavus (NT5046) 0.2017269 1
Diacerein:Ruminococcus torques (NT5047) 0.03887557 0
Diacerein:Streptococcus parasanguinis (NT5072) 0.31297174 1
Diacerein:Streptococcus salivarius (NT5038) 0.32179672 1
Diacerein:Veillonella parvula (NT5017) 0.0025768406 0
Tannic acid:Akkermansia muciniphila (NT5021) 0.14810419 1
Tannic acid:Bacteroides caccae (NT5050) 0.34634924 1
Tannic acid:Bacteroides fragilis (ET) (NT5033) 0.41516623 1
Tannic acid:Bacteroides fragilis (NT) (NT5003) 0.66925997 1
Tannic acid:Bacteroides ovatus (NT5054) 0.6525264 1
Tannic acid:Bacteroides thetaiotaomicron (NT5004) 0.6032843 1
Tannic acid:Bacteroides uniformis (NT5002) 0.7926673 1
Tannic acid:Bacteroides vulgatus (NT5001) 0.65930325 1
Tannic acid:Bacteroides xylanisolvens (NT5064) 0.5150406 1
Tannic acid:Bifidobacterium adolescentis (NT5022) 0.8262483 1
Tannic acid:Bifidobacterium longum (NT5028) 0.87367266 1
Tannic acid:Bilophila wadsworthia (NT5036) 0.37479854 1
Tannic acid:Blautia obeum (NT5069) 0.96919596 1
Tannic acid:Clostridium bolteae (NT5026) 0.6325356 1
Tannic acid:Clostridium difficile (NT5083) 0.76485956 1
Tannic acid:Clostridium perfringens (NT5032) 0.9400416 1
Tannic acid:Clostridium ramosum (NT5006) 0.63179255 1
Tannic acid:Clostridium saccharolyticum (NT5037) 0.9665654 1
Tannic acid:Collinsella aerofaciens (NT5073) 0.931349 1
Tannic acid:Coprococcus comes (NT5048) 0.81581396 1
Tannic acid:Dorea formicigenerans (NT5076) 0.7600574 1
Tannic acid:Eggerthella lenta (NT5024) 0.7122834 1
Tannic acid:Escherichia coli ED1a (NT5078) 0.21520844 1
Tannic acid:Escherichia coli IAI1 (NT5077) 0.3389818 1
Tannic acid:Eubacterium eligens (NT5075) 0.6733014 1
Tannic acid:Eubacterium rectale (NT5009) 0.7971731 1
Tannic acid:Fusobacterium nucleatum (NT5025) 0.26971316 1
Tannic acid:Lactobacillus paracasei (NT5042) 0.39337808 1
Tannic acid:Odoribacter splanchnicus (NT5081) 0.6697774 1
Tannic acid:Parabacteroides distasonis (NT5074) 0.35253143 1
Tannic acid:Parabacteroides merdae (NT5071) 0.5900811 1
Tannic acid:Prevotella copri (NT5019) 0.41827977 1
Tannic acid:Roseburia hominis (NT5079) 0.8130829 1
Tannic acid:Roseburia intestinalis (NT5011) 0.89299095 1
Tannic acid:Ruminococcus bromii (NT5045) 0.7250628 1
Tannic acid:Ruminococcus gnavus (NT5046) 0.92325926 1
Tannic acid:Ruminococcus torques (NT5047) 0.74494725 1
Tannic acid:Streptococcus parasanguinis (NT5072) 0.84914875 1
Tannic acid:Streptococcus salivarius (NT5038) 0.9259082 1
Tannic acid:Veillonella parvula (NT5017) 0.086976565 1
Elivitegravir:Akkermansia muciniphila (NT5021) 5.8446727e-05 0
Elivitegravir:Bacteroides caccae (NT5050) 0.004024018 0
Elivitegravir:Bacteroides fragilis (ET) (NT5033) 0.009454331 0
Elivitegravir:Bacteroides fragilis (NT) (NT5003) 0.07524494 1
Elivitegravir:Bacteroides ovatus (NT5054) 0.02342812 0
Elivitegravir:Bacteroides thetaiotaomicron (NT5004) 0.027894063 0
Elivitegravir:Bacteroides uniformis (NT5002) 0.07392661 1
Elivitegravir:Bacteroides vulgatus (NT5001) 0.020527622 0
Elivitegravir:Bacteroides xylanisolvens (NT5064) 0.012061624 0
Elivitegravir:Bifidobacterium adolescentis (NT5022) 0.005327784 0
Elivitegravir:Bifidobacterium longum (NT5028) 0.0011185277 0
Elivitegravir:Bilophila wadsworthia (NT5036) 0.0008454524 0
Elivitegravir:Blautia obeum (NT5069) 0.054522105 1
Elivitegravir:Clostridium bolteae (NT5026) 0.09205812 1
Elivitegravir:Clostridium difficile (NT5083) 0.09685929 1
Elivitegravir:Clostridium perfringens (NT5032) 0.29570484 1
Elivitegravir:Clostridium ramosum (NT5006) 0.0046937144 0
Elivitegravir:Clostridium saccharolyticum (NT5037) 0.11016344 1
Elivitegravir:Collinsella aerofaciens (NT5073) 0.009054883 0
Elivitegravir:Coprococcus comes (NT5048) 0.038549088 0
Elivitegravir:Dorea formicigenerans (NT5076) 0.01567359 0
Elivitegravir:Eggerthella lenta (NT5024) 0.011971686 0
Elivitegravir:Escherichia coli ED1a (NT5078) 0.0018640948 0
Elivitegravir:Escherichia coli IAI1 (NT5077) 0.010240566 0
Elivitegravir:Eubacterium eligens (NT5075) 0.0023924252 0
Elivitegravir:Eubacterium rectale (NT5009) 0.0028245621 0
Elivitegravir:Fusobacterium nucleatum (NT5025) 0.0060556624 0
Elivitegravir:Lactobacillus paracasei (NT5042) 0.0016452662 0
Elivitegravir:Odoribacter splanchnicus (NT5081) 0.03233667 0
Elivitegravir:Parabacteroides distasonis (NT5074) 0.023003478 0
Elivitegravir:Parabacteroides merdae (NT5071) 0.04894803 1
Elivitegravir:Prevotella copri (NT5019) 0.012350069 0
Elivitegravir:Roseburia hominis (NT5079) 0.008158533 0
Elivitegravir:Roseburia intestinalis (NT5011) 0.011531965 0
Elivitegravir:Ruminococcus bromii (NT5045) 0.004448215 0
Elivitegravir:Ruminococcus gnavus (NT5046) 0.11191584 1
Elivitegravir:Ruminococcus torques (NT5047) 0.006035722 0
Elivitegravir:Streptococcus parasanguinis (NT5072) 0.009026922 0
Elivitegravir:Streptococcus salivarius (NT5038) 0.025662545 0
Elivitegravir:Veillonella parvula (NT5017) 0.005520873 0
Opicapone:Akkermansia muciniphila (NT5021) 0.032993417 0
Opicapone:Bacteroides caccae (NT5050) 0.10987621 1
Opicapone:Bacteroides fragilis (ET) (NT5033) 0.2369922 1
Opicapone:Bacteroides fragilis (NT) (NT5003) 0.13111702 1
Opicapone:Bacteroides ovatus (NT5054) 0.31252778 1
Opicapone:Bacteroides thetaiotaomicron (NT5004) 0.165412 1
Opicapone:Bacteroides uniformis (NT5002) 0.4860035 1
Opicapone:Bacteroides vulgatus (NT5001) 0.44147408 1
Opicapone:Bacteroides xylanisolvens (NT5064) 0.19198574 1
Opicapone:Bifidobacterium adolescentis (NT5022) 0.28456986 1
Opicapone:Bifidobacterium longum (NT5028) 0.16195852 1
Opicapone:Bilophila wadsworthia (NT5036) 0.008738157 0
Opicapone:Blautia obeum (NT5069) 0.6657802 1
Opicapone:Clostridium bolteae (NT5026) 0.78267753 1
Opicapone:Clostridium difficile (NT5083) 0.1685511 1
Opicapone:Clostridium perfringens (NT5032) 0.5146731 1
Opicapone:Clostridium ramosum (NT5006) 0.3225787 1
Opicapone:Clostridium saccharolyticum (NT5037) 0.43571606 1
Opicapone:Collinsella aerofaciens (NT5073) 0.7105377 1
Opicapone:Coprococcus comes (NT5048) 0.7458837 1
Opicapone:Dorea formicigenerans (NT5076) 0.45358396 1
Opicapone:Eggerthella lenta (NT5024) 0.38386127 1
Opicapone:Escherichia coli ED1a (NT5078) 0.067430764 1
Opicapone:Escherichia coli IAI1 (NT5077) 0.06652998 1
Opicapone:Eubacterium eligens (NT5075) 0.07716452 1
Opicapone:Eubacterium rectale (NT5009) 0.28869063 1
Opicapone:Fusobacterium nucleatum (NT5025) 0.35200208 1
Opicapone:Lactobacillus paracasei (NT5042) 0.063119516 1
Opicapone:Odoribacter splanchnicus (NT5081) 0.47822452 1
Opicapone:Parabacteroides distasonis (NT5074) 0.080828734 1
Opicapone:Parabacteroides merdae (NT5071) 0.2802487 1
Opicapone:Prevotella copri (NT5019) 0.47112322 1
Opicapone:Roseburia hominis (NT5079) 0.13968675 1
Opicapone:Roseburia intestinalis (NT5011) 0.35331023 1
Opicapone:Ruminococcus bromii (NT5045) 0.5439629 1
Opicapone:Ruminococcus gnavus (NT5046) 0.43295488 1
Opicapone:Ruminococcus torques (NT5047) 0.66646415 1
Opicapone:Streptococcus parasanguinis (NT5072) 0.27494666 1
Opicapone:Streptococcus salivarius (NT5038) 0.18450841 1
Opicapone:Veillonella parvula (NT5017) 0.023915736 0
Ebastine:Akkermansia muciniphila (NT5021) 0.00031498045 0
Ebastine:Bacteroides caccae (NT5050) 0.003566333 0
Ebastine:Bacteroides fragilis (ET) (NT5033) 0.00742425 0
Ebastine:Bacteroides fragilis (NT) (NT5003) 0.1359192 1
Ebastine:Bacteroides ovatus (NT5054) 0.004271365 0
Ebastine:Bacteroides thetaiotaomicron (NT5004) 0.104025334 1
Ebastine:Bacteroides uniformis (NT5002) 0.4465444 1
Ebastine:Bacteroides vulgatus (NT5001) 0.7600128 1
Ebastine:Bacteroides xylanisolvens (NT5064) 0.0011378429 0
Ebastine:Bifidobacterium adolescentis (NT5022) 0.00334617 0
Ebastine:Bifidobacterium longum (NT5028) 0.056501295 1
Ebastine:Bilophila wadsworthia (NT5036) 1.4142631e-05 0
Ebastine:Blautia obeum (NT5069) 0.3663111 1
Ebastine:Clostridium bolteae (NT5026) 0.0008343482 0
Ebastine:Clostridium difficile (NT5083) 0.19612336 1
Ebastine:Clostridium perfringens (NT5032) 0.096803926 1
Ebastine:Clostridium ramosum (NT5006) 0.0003824933 0
Ebastine:Clostridium saccharolyticum (NT5037) 0.014379254 0
Ebastine:Collinsella aerofaciens (NT5073) 0.3467002 1
Ebastine:Coprococcus comes (NT5048) 0.765561 1
Ebastine:Dorea formicigenerans (NT5076) 0.205408 1
Ebastine:Eggerthella lenta (NT5024) 0.003495731 0
Ebastine:Escherichia coli ED1a (NT5078) 3.0873045e-05 0
Ebastine:Escherichia coli IAI1 (NT5077) 0.0008036033 0
Ebastine:Eubacterium eligens (NT5075) 0.796516 1
Ebastine:Eubacterium rectale (NT5009) 0.4396225 1
Ebastine:Fusobacterium nucleatum (NT5025) 0.00011426591 0
Ebastine:Lactobacillus paracasei (NT5042) 0.0030341202 0
Ebastine:Odoribacter splanchnicus (NT5081) 0.03883654 0
Ebastine:Parabacteroides distasonis (NT5074) 0.40334934 1
Ebastine:Parabacteroides merdae (NT5071) 0.7011329 1
Ebastine:Prevotella copri (NT5019) 0.55723816 1
Ebastine:Roseburia hominis (NT5079) 0.036915984 0
Ebastine:Roseburia intestinalis (NT5011) 0.90347576 1
Ebastine:Ruminococcus bromii (NT5045) 0.0035839789 0
Ebastine:Ruminococcus gnavus (NT5046) 0.92736363 1
Ebastine:Ruminococcus torques (NT5047) 0.7472573 1
Ebastine:Streptococcus parasanguinis (NT5072) 0.0016125975 0
Ebastine:Streptococcus salivarius (NT5038) 0.0077896933 0
Ebastine:Veillonella parvula (NT5017) 0.06644204 1