prot_bert_bfd_ss3 / environment.yml
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name: prottrans
channels:
- conda-forge
- defaults
dependencies:
- python=3.11
- pip
- pip:
- torch==2.9.0
- transformers==4.57.1
- sentencepiece==0.2.1
- hf_xet==1.2.0
- protobuf==6.33.0
- ipykernel==7.1.0
- onnxruntime-tools==1.7.0
- onnxruntime-gpu==1.23.2
- biopython==1.86
- bertviz==1.4.1
- h5py==3.15.1
- tensorflow==2.20.0
- tf-keras==2.20.1