Add model card
Browse files
README.md
ADDED
|
@@ -0,0 +1,25 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
---
|
| 2 |
+
license: other
|
| 3 |
+
library_name: pytorch
|
| 4 |
+
tags:
|
| 5 |
+
- computational-pathology
|
| 6 |
+
- whole-slide-imaging
|
| 7 |
+
- dna-methylation
|
| 8 |
+
- histopathology
|
| 9 |
+
---
|
| 10 |
+
|
| 11 |
+
# HistoMethyl
|
| 12 |
+
|
| 13 |
+
This repository hosts released HistoMethyl checkpoints.
|
| 14 |
+
|
| 15 |
+
Files:
|
| 16 |
+
|
| 17 |
+
- `histomethyl_gigapath.ckpt`: HistoMethyl checkpoint using the Prov-GigaPath image backbone.
|
| 18 |
+
- `histomethyl_gigapath_hparams.yaml`: model hyperparameters for the GigaPath checkpoint.
|
| 19 |
+
- `histomethyl_feather.ckpt`: HistoMethyl checkpoint using the FEATHER image backbone.
|
| 20 |
+
- `histomethyl_feather_hparams.yaml`: model hyperparameters for the FEATHER checkpoint.
|
| 21 |
+
|
| 22 |
+
The code for loading checkpoints and running downstream evaluation is available at:
|
| 23 |
+
https://github.com/wangd12rpi/histomethyl
|
| 24 |
+
|
| 25 |
+
The checkpoints are intended for research use. Users are responsible for complying with the licenses and access requirements of upstream backbone models and dependencies.
|