leaves-ph / RESULTS.md
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Leaves.PH canopy classifier: RESULTS.md
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# Manual high-resolution labeling β€” reality-anchored accuracy (Claim 3 gold truth)
Done 2026-05-29. The first accuracy number for Leaves.PH measured against
**human visual labels on high-resolution imagery**, not against another satellite
product. Replaces "agreement with ESA WorldCover" as the headline accuracy.
## What was done
- **Sample.** 42 30m pixels inside the 17-LGU mask, drawn (seed 42) across **6
disjoint strata** that partition the 904,715 valid pixels, so the sample is
population-weightable (Horvitz-Thompson) and both predicted classes are present:
| Stratum | Definition | Pop pixels | Pop % | Sampled |
|---|---|---|---|---|
| D clear-canopy | NDVI > 0.65 | 77,845 | 8.6% | 10 |
| C boundary | NDVI in [0.55, 0.65] | 37,953 | 4.2% | 10 |
| A dense-urban | ESA built-up & NDVI < 0.55 | 475,429 | 52.6% | 6 |
| B reclaimed | ESA bare & NDVI < 0.55 | 6,209 | 0.7% | 6 |
| E green-fringe | ESA tree & NDVI < 0.55 | 32,660 | 3.6% | 6 |
| F other-low | other ESA & NDVI < 0.55 | 274,619 | 30.4% | 4 |
- **Reference imagery.** Esri World Imagery (~0.5–1m, no-auth ArcGIS export) per
chip, bbox = target 30m cell Β± 3.5 cells (~210m), with a red box drawn on the
**exact** 30m target cell. Sentinel-2 RGB crop (`s2_rgb_2021.tif`) as a second
view. Ambiguous cells re-inspected at 2.3Γ— and 3.4Γ— zoom.
- **Labeling.** Each chip labeled by Claude via visual inspection (read the
annotated chip, decide "is β‰₯25% of the marked 30m cell woody **tree** canopy?").
Labels + one-line reasons in `my_labels.csv`; chips in `chips/`, zooms in `zoom/`,
ultra-zooms in `uz/`, contact sheet `contact_sheet.png`.
## Headline result β€” NDVI > 0.62 mask vs manual labels
Confusion (n=42): **TP 10, FP 3, FN 5, TN 24.**
| Metric | Pooled (stratified sample) | Population-weighted (H-T) |
|---|---|---|
| Precision | 0.77 (95% CI 0.50–0.92) | **0.78** (95% CI 0.54–1.0) |
| Recall | 0.67 (95% CI 0.42–0.85) | **0.73** (95% CI 0.61–0.88) |
| F1 | 0.71 | **0.76** |
| IoU | 0.56 | **0.61** |
| Accuracy | 0.81 | 0.95 |
- **Implied true canopy fraction = 10.5%**, against the mask's 9.86% β€” the
reality-anchored canopy area lands within ~0.7pp of the published 9.79% estimate.
- Dropping the 5 cells Claude flagged ambiguous (n=37): precision 0.86, recall 0.83,
IoU 0.73 (population-weighted precision 0.86, recall 0.83).
### Where the errors live (matches the prior ESA-gap analysis)
- **3 false positives, all high-NDVI non-tree vegetation:** riparian scrub on a
gravel bar (#0), a dense grass/low-veg slope (#6), a dry-grass field with a green
edge (#12). Exactly the "we over-call dense grass/scrub" failure the threshold
analysis predicted.
- **5 false negatives, all real canopy the strict 0.62 cut or 30m mixing misses:**
a tall-canopy cell at NDVI 0.619 just under the cut (#13, Meta 11m), and four
ESA-tree green-fringe cells (#32/33/35/37) where sub-5m or sparse street/yard trees
dilute the 30m NDVI below threshold.
- Per-stratum: dense-urban (A), reclaimed (B) and water/other (F) are 100% correctly
negative; all recall loss is concentrated in the green-fringe (E) stratum.
## Detection-model ceiling β€” Meta height β‰₯ 5m vs manual labels
The detection model (CLIP + gradient-boosted regression) is trained to **reproduce
Meta's 1m canopy fraction**, so the Meta target is its accuracy ceiling. Meta height
β‰₯ 5m as a classifier vs the same manual labels:
| Metric | Pooled | Population-weighted |
|---|---|---|
| Precision | 1.00 (95% CI 0.68–1.0) | 1.00 |
| Recall | 0.53 (95% CI 0.30–0.75) | 0.59 (95% CI 0.34–0.81) |
| F1 / IoU | 0.70 / 0.53 | 0.74 / 0.59 |
Meta never false-positives in this sample (every Meta β‰₯ 5m cell is real canopy by
eye) but recovers only ~59% of canopy and implies just 6.2% canopy vs the 10.5%
truth β€” it misses sub-5m and sparse urban trees. The NDVI mask trades some precision
(0.78 vs 1.00) for much higher recall (0.73 vs 0.59); the two are complementary, and
the model, reproducing Meta at RΒ² 0.83–0.86, inherits Meta's high-precision /
moderate-recall profile.
## Honest caveats
- n=42 manual labels β†’ wide CIs; this is a defensible first reality-anchored number,
not a definitive accuracy. Single labeler (Claude) β€” no second-rater ΞΊ.
- "Canopy" = β‰₯25% of the 30m cell is woody tree canopy by eye on ~0.6m imagery dated
near (not exactly) 2021; canopy moves slowly so Β±1–2yr basemap drift is minor.
- Population-weighting leans on small per-stratum n (A=6, F=4 carry large weights);
those strata are unambiguous (roofs / bare / water), so their TN weight is robust,
but the weighted recall depends on the 6 green-fringe chips.
## Files
`sample_metadata.csv` Β· `my_labels.csv` Β· `accuracy_results.json` Β·
`strata_pop.json` Β· `contact_sheet.png` Β· `chips/` `zoom/` `uz/` `s2crops/` Β·
scripts `sample_chips.py` `build_composites.py` `zoom.py` `uz.py` `uz2.py`
`compute_accuracy.py` `build_contact_sheet.py`.