Sid01123 commited on
Commit
327881b
·
verified ·
1 Parent(s): b926391

Changed data path to data

Browse files
Files changed (1) hide show
  1. agent/agent.py +3 -2
agent/agent.py CHANGED
@@ -16,8 +16,9 @@ class SigSpace(Basic_Agent):
16
  self.conversation = []
17
  self.conversation.append({"role": "system", "content": self.system_prompt})
18
 
19
- # initialize data for jump
20
- path = pathlib.Path("/home/ubuntu/giovanni/code/Tahoe_Hackathon/datasets")
 
21
  # jump_path = pathlib.Path("/home/ubuntu/giovanni/data")
22
  self.jump_tahoe_drug_metadata = pd.read_csv(path/"drug_metadata_inchikey.csv")
23
  self.jump_similarity_score = pd.read_csv(path/"compound_genetic_perturbation_cosine_similarity_inchikey.csv")
 
16
  self.conversation = []
17
  self.conversation.append({"role": "system", "content": self.system_prompt})
18
 
19
+ # initialize data path
20
+ # path = pathlib.Path("/home/ubuntu/giovanni/code/Tahoe_Hackathon/datasets") # on lambda
21
+ path = pathlib.Path("data")
22
  # jump_path = pathlib.Path("/home/ubuntu/giovanni/data")
23
  self.jump_tahoe_drug_metadata = pd.read_csv(path/"drug_metadata_inchikey.csv")
24
  self.jump_similarity_score = pd.read_csv(path/"compound_genetic_perturbation_cosine_similarity_inchikey.csv")