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library(Seurat)
DimPlot(rAAV_RV.inte,)
table(rAAV_RV.inte$sample)
FeaturePlot(rAAV_RV.inte,
reduction = 'tsne',
c('rAAV_infected','RV_infected','Syt6','Tshz2'),
ncol = 2,
cols=c("lightgrey", "red"),
min.cutoff='q1')
Idents(rAAV_RV.inte) <- rAAV_RV.inte$sample # 设定细胞身份
DimPlot(rAAV_RV.inte, reduction = "tsne", group.by = "sample",
cols = c("#00bfc4", "lightgrey","red", "grey"), pt.size = 0.5) +
ggtitle("t-SNE Visualization of Infected Cells")
Idents(rAAV_RV.inte) <- rAAV_RV.inte$Maintype # 设定细胞身份
DimPlot(rAAV_RV.inte, reduction = "umap", pt.size = 0.5) +
ggtitle("t-SNE Visualization of Infected Cells")
table(rAAV_RV.inte$Maintype,rAAV_RV.inte$sample)
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