Model save
Browse files- README.md +83 -1
- config.json +122 -0
- merges.txt +0 -0
- pytorch_model.bin +3 -0
- special_tokens_map.json +15 -0
- tokenizer.json +0 -0
- tokenizer_config.json +15 -0
- training_args.bin +3 -0
- vocab.json +0 -0
README.md
CHANGED
|
@@ -1,3 +1,85 @@
|
|
| 1 |
---
|
| 2 |
-
license:
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 3 |
---
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
---
|
| 2 |
+
license: mit
|
| 3 |
+
base_model: roberta-base
|
| 4 |
+
tags:
|
| 5 |
+
- generated_from_trainer
|
| 6 |
+
metrics:
|
| 7 |
+
- f1
|
| 8 |
+
- accuracy
|
| 9 |
+
- recall
|
| 10 |
+
model-index:
|
| 11 |
+
- name: study-dictionary-roberta-base
|
| 12 |
+
results: []
|
| 13 |
---
|
| 14 |
+
|
| 15 |
+
<!-- This model card has been generated automatically according to the information the Trainer had access to. You
|
| 16 |
+
should probably proofread and complete it, then remove this comment. -->
|
| 17 |
+
|
| 18 |
+
# study-dictionary-roberta-base
|
| 19 |
+
|
| 20 |
+
This model is a fine-tuned version of [roberta-base](https://huggingface.co/roberta-base) on an unknown dataset.
|
| 21 |
+
It achieves the following results on the evaluation set:
|
| 22 |
+
- Loss: 0.0011
|
| 23 |
+
- F1: 1.0
|
| 24 |
+
- Roc Auc: 1.0
|
| 25 |
+
- Accuracy: 1.0
|
| 26 |
+
- Recall: 1.0
|
| 27 |
+
|
| 28 |
+
## Model description
|
| 29 |
+
|
| 30 |
+
More information needed
|
| 31 |
+
|
| 32 |
+
## Intended uses & limitations
|
| 33 |
+
|
| 34 |
+
More information needed
|
| 35 |
+
|
| 36 |
+
## Training and evaluation data
|
| 37 |
+
|
| 38 |
+
More information needed
|
| 39 |
+
|
| 40 |
+
## Training procedure
|
| 41 |
+
|
| 42 |
+
### Training hyperparameters
|
| 43 |
+
|
| 44 |
+
The following hyperparameters were used during training:
|
| 45 |
+
- learning_rate: 2e-05
|
| 46 |
+
- train_batch_size: 10
|
| 47 |
+
- eval_batch_size: 10
|
| 48 |
+
- seed: 42
|
| 49 |
+
- optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08
|
| 50 |
+
- lr_scheduler_type: linear
|
| 51 |
+
- lr_scheduler_warmup_ratio: 0.1
|
| 52 |
+
- num_epochs: 20
|
| 53 |
+
|
| 54 |
+
### Training results
|
| 55 |
+
|
| 56 |
+
| Training Loss | Epoch | Step | Validation Loss | F1 | Roc Auc | Accuracy | Recall |
|
| 57 |
+
|:-------------:|:-----:|:-----:|:---------------:|:------:|:-------:|:--------:|:------:|
|
| 58 |
+
| 0.3342 | 1.0 | 778 | 0.1192 | 0.0 | 0.5 | 0.0 | 0.0 |
|
| 59 |
+
| 0.1099 | 2.0 | 1556 | 0.1040 | 0.0 | 0.5 | 0.0 | 0.0 |
|
| 60 |
+
| 0.0892 | 3.0 | 2334 | 0.0465 | 0.6835 | 0.7644 | 0.5479 | 0.5293 |
|
| 61 |
+
| 0.0345 | 4.0 | 3112 | 0.0240 | 0.9147 | 0.9241 | 0.8817 | 0.8485 |
|
| 62 |
+
| 0.025 | 5.0 | 3890 | 0.0152 | 0.9594 | 0.9650 | 0.9493 | 0.9303 |
|
| 63 |
+
| 0.0144 | 6.0 | 4668 | 0.0114 | 0.9735 | 0.9811 | 0.9671 | 0.9625 |
|
| 64 |
+
| 0.0118 | 7.0 | 5446 | 0.0082 | 0.9779 | 0.9848 | 0.9717 | 0.9700 |
|
| 65 |
+
| 0.0081 | 8.0 | 6224 | 0.0057 | 0.9873 | 0.9887 | 0.9839 | 0.9774 |
|
| 66 |
+
| 0.0065 | 9.0 | 7002 | 0.0052 | 0.9839 | 0.9860 | 0.9848 | 0.9720 |
|
| 67 |
+
| 0.0054 | 10.0 | 7780 | 0.0039 | 0.9895 | 0.9904 | 0.9888 | 0.9809 |
|
| 68 |
+
| 0.0041 | 11.0 | 8558 | 0.0030 | 0.9942 | 0.9949 | 0.9925 | 0.9899 |
|
| 69 |
+
| 0.0036 | 12.0 | 9336 | 0.0026 | 0.9936 | 0.9940 | 0.9942 | 0.9881 |
|
| 70 |
+
| 0.0027 | 13.0 | 10114 | 0.0023 | 0.9956 | 0.9964 | 0.9958 | 0.9927 |
|
| 71 |
+
| 0.0023 | 14.0 | 10892 | 0.0018 | 0.9985 | 0.9986 | 0.9972 | 0.9972 |
|
| 72 |
+
| 0.0021 | 15.0 | 11670 | 0.0017 | 0.9985 | 0.9994 | 0.9974 | 0.9988 |
|
| 73 |
+
| 0.0018 | 16.0 | 12448 | 0.0015 | 0.9985 | 0.9992 | 0.9979 | 0.9985 |
|
| 74 |
+
| 0.0014 | 17.0 | 13226 | 0.0012 | 0.9997 | 0.9998 | 0.9994 | 0.9995 |
|
| 75 |
+
| 0.0013 | 18.0 | 14004 | 0.0011 | 1.0 | 1.0 | 1.0 | 1.0 |
|
| 76 |
+
| 0.0012 | 19.0 | 14782 | 0.0010 | 1.0 | 1.0 | 1.0 | 1.0 |
|
| 77 |
+
| 0.0012 | 20.0 | 15560 | 0.0010 | 1.0 | 1.0 | 1.0 | 1.0 |
|
| 78 |
+
|
| 79 |
+
|
| 80 |
+
### Framework versions
|
| 81 |
+
|
| 82 |
+
- Transformers 4.33.2
|
| 83 |
+
- Pytorch 2.0.1+cu118
|
| 84 |
+
- Datasets 2.14.5
|
| 85 |
+
- Tokenizers 0.13.3
|
config.json
ADDED
|
@@ -0,0 +1,122 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"_name_or_path": "roberta-base",
|
| 3 |
+
"architectures": [
|
| 4 |
+
"BertForSequenceClassification"
|
| 5 |
+
],
|
| 6 |
+
"attention_probs_dropout_prob": 0.1,
|
| 7 |
+
"bos_token_id": 0,
|
| 8 |
+
"classifier_dropout": null,
|
| 9 |
+
"eos_token_id": 2,
|
| 10 |
+
"hidden_act": "gelu",
|
| 11 |
+
"hidden_dropout_prob": 0.1,
|
| 12 |
+
"hidden_size": 768,
|
| 13 |
+
"id2label": {
|
| 14 |
+
"0": "NCT02136134",
|
| 15 |
+
"1": "NCT04181827",
|
| 16 |
+
"2": "NCT03399799",
|
| 17 |
+
"3": "NCT04557098",
|
| 18 |
+
"4": "NCT02252172",
|
| 19 |
+
"5": "NCT03275285",
|
| 20 |
+
"6": "NCT04162210",
|
| 21 |
+
"7": "NCT01554852",
|
| 22 |
+
"8": "NCT01712789",
|
| 23 |
+
"9": "NCT02541383",
|
| 24 |
+
"10": "NCT00551928",
|
| 25 |
+
"11": "NCT02336815",
|
| 26 |
+
"12": "NCT03110562",
|
| 27 |
+
"13": "NCT03548207",
|
| 28 |
+
"14": "NCT02076009",
|
| 29 |
+
"15": "NCT02412878",
|
| 30 |
+
"16": "NCT03180736",
|
| 31 |
+
"17": "NCT03361748",
|
| 32 |
+
"18": "NCT03651128",
|
| 33 |
+
"19": "NCT01660633",
|
| 34 |
+
"20": "NCT03158688",
|
| 35 |
+
"21": "NCT01080391",
|
| 36 |
+
"22": "NCT03525678",
|
| 37 |
+
"23": "NCT02654132",
|
| 38 |
+
"24": "NCT02990338",
|
| 39 |
+
"25": "NCT01564537",
|
| 40 |
+
"26": "NCT05066646",
|
| 41 |
+
"27": "NCT01985126",
|
| 42 |
+
"28": "NCT01734928",
|
| 43 |
+
"29": "NCT01998971",
|
| 44 |
+
"30": "NCT02195479",
|
| 45 |
+
"31": "NCT03151811",
|
| 46 |
+
"32": "NCT01311687",
|
| 47 |
+
"33": "NCT02874742",
|
| 48 |
+
"34": "NCT05083169",
|
| 49 |
+
"35": "NCT01239797",
|
| 50 |
+
"36": "NCT01023308",
|
| 51 |
+
"37": "NCT02963493",
|
| 52 |
+
"38": "NCT00114101",
|
| 53 |
+
"39": "NCT03412565",
|
| 54 |
+
"40": "NCT00430365",
|
| 55 |
+
"41": "NCT03277105",
|
| 56 |
+
"42": "NCT00103662",
|
| 57 |
+
"43": "ISRCTN17354232",
|
| 58 |
+
"44": "NCT01568866"
|
| 59 |
+
},
|
| 60 |
+
"initializer_range": 0.02,
|
| 61 |
+
"intermediate_size": 3072,
|
| 62 |
+
"label2id": {
|
| 63 |
+
"ISRCTN17354232": 43,
|
| 64 |
+
"NCT00103662": 42,
|
| 65 |
+
"NCT00114101": 38,
|
| 66 |
+
"NCT00430365": 40,
|
| 67 |
+
"NCT00551928": 10,
|
| 68 |
+
"NCT01023308": 36,
|
| 69 |
+
"NCT01080391": 21,
|
| 70 |
+
"NCT01239797": 35,
|
| 71 |
+
"NCT01311687": 32,
|
| 72 |
+
"NCT01554852": 7,
|
| 73 |
+
"NCT01564537": 25,
|
| 74 |
+
"NCT01568866": 44,
|
| 75 |
+
"NCT01660633": 19,
|
| 76 |
+
"NCT01712789": 8,
|
| 77 |
+
"NCT01734928": 28,
|
| 78 |
+
"NCT01985126": 27,
|
| 79 |
+
"NCT01998971": 29,
|
| 80 |
+
"NCT02076009": 14,
|
| 81 |
+
"NCT02136134": 0,
|
| 82 |
+
"NCT02195479": 30,
|
| 83 |
+
"NCT02252172": 4,
|
| 84 |
+
"NCT02336815": 11,
|
| 85 |
+
"NCT02412878": 15,
|
| 86 |
+
"NCT02541383": 9,
|
| 87 |
+
"NCT02654132": 23,
|
| 88 |
+
"NCT02874742": 33,
|
| 89 |
+
"NCT02963493": 37,
|
| 90 |
+
"NCT02990338": 24,
|
| 91 |
+
"NCT03110562": 12,
|
| 92 |
+
"NCT03151811": 31,
|
| 93 |
+
"NCT03158688": 20,
|
| 94 |
+
"NCT03180736": 16,
|
| 95 |
+
"NCT03275285": 5,
|
| 96 |
+
"NCT03277105": 41,
|
| 97 |
+
"NCT03361748": 17,
|
| 98 |
+
"NCT03399799": 2,
|
| 99 |
+
"NCT03412565": 39,
|
| 100 |
+
"NCT03525678": 22,
|
| 101 |
+
"NCT03548207": 13,
|
| 102 |
+
"NCT03651128": 18,
|
| 103 |
+
"NCT04162210": 6,
|
| 104 |
+
"NCT04181827": 1,
|
| 105 |
+
"NCT04557098": 3,
|
| 106 |
+
"NCT05066646": 26,
|
| 107 |
+
"NCT05083169": 34
|
| 108 |
+
},
|
| 109 |
+
"layer_norm_eps": 1e-05,
|
| 110 |
+
"max_position_embeddings": 514,
|
| 111 |
+
"model_type": "bert",
|
| 112 |
+
"num_attention_heads": 12,
|
| 113 |
+
"num_hidden_layers": 12,
|
| 114 |
+
"pad_token_id": 1,
|
| 115 |
+
"position_embedding_type": "absolute",
|
| 116 |
+
"problem_type": "multi_label_classification",
|
| 117 |
+
"torch_dtype": "float32",
|
| 118 |
+
"transformers_version": "4.33.2",
|
| 119 |
+
"type_vocab_size": 1,
|
| 120 |
+
"use_cache": true,
|
| 121 |
+
"vocab_size": 50265
|
| 122 |
+
}
|
merges.txt
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
pytorch_model.bin
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:3928fbbd9e0ec09587758292d8188fe3e1ea57057790ced14e93446deeb2d5e4
|
| 3 |
+
size 498789297
|
special_tokens_map.json
ADDED
|
@@ -0,0 +1,15 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"bos_token": "<s>",
|
| 3 |
+
"cls_token": "<s>",
|
| 4 |
+
"eos_token": "</s>",
|
| 5 |
+
"mask_token": {
|
| 6 |
+
"content": "<mask>",
|
| 7 |
+
"lstrip": true,
|
| 8 |
+
"normalized": false,
|
| 9 |
+
"rstrip": false,
|
| 10 |
+
"single_word": false
|
| 11 |
+
},
|
| 12 |
+
"pad_token": "<pad>",
|
| 13 |
+
"sep_token": "</s>",
|
| 14 |
+
"unk_token": "<unk>"
|
| 15 |
+
}
|
tokenizer.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
tokenizer_config.json
ADDED
|
@@ -0,0 +1,15 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"add_prefix_space": false,
|
| 3 |
+
"bos_token": "<s>",
|
| 4 |
+
"clean_up_tokenization_spaces": true,
|
| 5 |
+
"cls_token": "<s>",
|
| 6 |
+
"eos_token": "</s>",
|
| 7 |
+
"errors": "replace",
|
| 8 |
+
"mask_token": "<mask>",
|
| 9 |
+
"model_max_length": 512,
|
| 10 |
+
"pad_token": "<pad>",
|
| 11 |
+
"sep_token": "</s>",
|
| 12 |
+
"tokenizer_class": "RobertaTokenizer",
|
| 13 |
+
"trim_offsets": true,
|
| 14 |
+
"unk_token": "<unk>"
|
| 15 |
+
}
|
training_args.bin
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:f040529a80aa19814879431b231153b18d44a3714ed291c0dacd8b6bb19d5295
|
| 3 |
+
size 4091
|
vocab.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|