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Browse files- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-264-merged/merges.txt +0 -0
- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-264-merged/model.safetensors.index.json +346 -0
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- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-264-merged/vocab.json +0 -0
- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/README.md +202 -0
- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/adapter_config.json +39 -0
- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/additional_config.json +1 -0
- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/args.json +364 -0
- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/trainer_state.json +1037 -0
- BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/images/eval_loss.png +0 -0
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- BIO/sft/qwen-production-08022302/v0-20250802-230250/logging.jsonl +0 -0
- BIO/sft/qwen-production-08022302/v0-20250802-230250/val_dataset.jsonl +0 -0
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-264-merged/merges.txt
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BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-264-merged/model.safetensors.index.json
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BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-264-merged/tokenizer_config.json
ADDED
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| 24 |
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| 27 |
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| 28 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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|
| 33 |
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|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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|
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|
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|
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|
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|
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|
| 196 |
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|
| 197 |
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"bos_token": null,
|
| 198 |
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"chat_template": "{%- if tools %}\n {{- '<|im_start|>system\\n' }}\n {%- if messages[0]['role'] == 'system' %}\n {{- messages[0]['content'] }}\n {%- else %}\n {{- 'You are Qwen, created by Alibaba Cloud. You are a helpful assistant.' }}\n {%- endif %}\n {{- \"\\n\\n# Tools\\n\\nYou may call one or more functions to assist with the user query.\\n\\nYou are provided with function signatures within <tools></tools> XML tags:\\n<tools>\" }}\n {%- for tool in tools %}\n {{- \"\\n\" }}\n {{- tool | tojson }}\n {%- endfor %}\n {{- \"\\n</tools>\\n\\nFor each function call, return a json object with function name and arguments within <tool_call></tool_call> XML tags:\\n<tool_call>\\n{\\\"name\\\": <function-name>, \\\"arguments\\\": <args-json-object>}\\n</tool_call><|im_end|>\\n\" }}\n{%- else %}\n {%- if messages[0]['role'] == 'system' %}\n {{- '<|im_start|>system\\n' + messages[0]['content'] + '<|im_end|>\\n' }}\n {%- else %}\n {{- '<|im_start|>system\\nYou are Qwen, created by Alibaba Cloud. You are a helpful assistant.<|im_end|>\\n' }}\n {%- endif %}\n{%- endif %}\n{%- for message in messages %}\n {%- if (message.role == \"user\") or (message.role == \"system\" and not loop.first) or (message.role == \"assistant\" and not message.tool_calls) %}\n {{- '<|im_start|>' + message.role + '\\n' + message.content + '<|im_end|>' + '\\n' }}\n {%- elif message.role == \"assistant\" %}\n {{- '<|im_start|>' + message.role }}\n {%- if message.content %}\n {{- '\\n' + message.content }}\n {%- endif %}\n {%- for tool_call in message.tool_calls %}\n {%- if tool_call.function is defined %}\n {%- set tool_call = tool_call.function %}\n {%- endif %}\n {{- '\\n<tool_call>\\n{\"name\": \"' }}\n {{- tool_call.name }}\n {{- '\", \"arguments\": ' }}\n {{- tool_call.arguments | tojson }}\n {{- '}\\n</tool_call>' }}\n {%- endfor %}\n {{- '<|im_end|>\\n' }}\n {%- elif message.role == \"tool\" %}\n {%- if (loop.index0 == 0) or (messages[loop.index0 - 1].role != \"tool\") %}\n {{- '<|im_start|>user' }}\n {%- endif %}\n {{- '\\n<tool_response>\\n' }}\n {{- message.content }}\n {{- '\\n</tool_response>' }}\n {%- if loop.last or (messages[loop.index0 + 1].role != \"tool\") %}\n {{- '<|im_end|>\\n' }}\n {%- endif %}\n {%- endif %}\n{%- endfor %}\n{%- if add_generation_prompt %}\n {{- '<|im_start|>assistant\\n' }}\n{%- endif %}\n",
|
| 199 |
+
"clean_up_tokenization_spaces": false,
|
| 200 |
+
"eos_token": "<|im_end|>",
|
| 201 |
+
"errors": "replace",
|
| 202 |
+
"extra_special_tokens": {},
|
| 203 |
+
"model_max_length": 131072,
|
| 204 |
+
"pad_token": "<|endoftext|>",
|
| 205 |
+
"split_special_tokens": false,
|
| 206 |
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"tokenizer_class": "Qwen2Tokenizer",
|
| 207 |
+
"unk_token": null
|
| 208 |
+
}
|
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-264-merged/vocab.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/README.md
ADDED
|
@@ -0,0 +1,202 @@
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|
| 1 |
+
---
|
| 2 |
+
base_model: /oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged
|
| 3 |
+
library_name: peft
|
| 4 |
+
---
|
| 5 |
+
|
| 6 |
+
# Model Card for Model ID
|
| 7 |
+
|
| 8 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 9 |
+
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
## Model Details
|
| 13 |
+
|
| 14 |
+
### Model Description
|
| 15 |
+
|
| 16 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 17 |
+
|
| 18 |
+
|
| 19 |
+
|
| 20 |
+
- **Developed by:** [More Information Needed]
|
| 21 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 22 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 23 |
+
- **Model type:** [More Information Needed]
|
| 24 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 25 |
+
- **License:** [More Information Needed]
|
| 26 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 27 |
+
|
| 28 |
+
### Model Sources [optional]
|
| 29 |
+
|
| 30 |
+
<!-- Provide the basic links for the model. -->
|
| 31 |
+
|
| 32 |
+
- **Repository:** [More Information Needed]
|
| 33 |
+
- **Paper [optional]:** [More Information Needed]
|
| 34 |
+
- **Demo [optional]:** [More Information Needed]
|
| 35 |
+
|
| 36 |
+
## Uses
|
| 37 |
+
|
| 38 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 39 |
+
|
| 40 |
+
### Direct Use
|
| 41 |
+
|
| 42 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 43 |
+
|
| 44 |
+
[More Information Needed]
|
| 45 |
+
|
| 46 |
+
### Downstream Use [optional]
|
| 47 |
+
|
| 48 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 49 |
+
|
| 50 |
+
[More Information Needed]
|
| 51 |
+
|
| 52 |
+
### Out-of-Scope Use
|
| 53 |
+
|
| 54 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 55 |
+
|
| 56 |
+
[More Information Needed]
|
| 57 |
+
|
| 58 |
+
## Bias, Risks, and Limitations
|
| 59 |
+
|
| 60 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 61 |
+
|
| 62 |
+
[More Information Needed]
|
| 63 |
+
|
| 64 |
+
### Recommendations
|
| 65 |
+
|
| 66 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 67 |
+
|
| 68 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 69 |
+
|
| 70 |
+
## How to Get Started with the Model
|
| 71 |
+
|
| 72 |
+
Use the code below to get started with the model.
|
| 73 |
+
|
| 74 |
+
[More Information Needed]
|
| 75 |
+
|
| 76 |
+
## Training Details
|
| 77 |
+
|
| 78 |
+
### Training Data
|
| 79 |
+
|
| 80 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 81 |
+
|
| 82 |
+
[More Information Needed]
|
| 83 |
+
|
| 84 |
+
### Training Procedure
|
| 85 |
+
|
| 86 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 87 |
+
|
| 88 |
+
#### Preprocessing [optional]
|
| 89 |
+
|
| 90 |
+
[More Information Needed]
|
| 91 |
+
|
| 92 |
+
|
| 93 |
+
#### Training Hyperparameters
|
| 94 |
+
|
| 95 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 96 |
+
|
| 97 |
+
#### Speeds, Sizes, Times [optional]
|
| 98 |
+
|
| 99 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 100 |
+
|
| 101 |
+
[More Information Needed]
|
| 102 |
+
|
| 103 |
+
## Evaluation
|
| 104 |
+
|
| 105 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 106 |
+
|
| 107 |
+
### Testing Data, Factors & Metrics
|
| 108 |
+
|
| 109 |
+
#### Testing Data
|
| 110 |
+
|
| 111 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 112 |
+
|
| 113 |
+
[More Information Needed]
|
| 114 |
+
|
| 115 |
+
#### Factors
|
| 116 |
+
|
| 117 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 118 |
+
|
| 119 |
+
[More Information Needed]
|
| 120 |
+
|
| 121 |
+
#### Metrics
|
| 122 |
+
|
| 123 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 124 |
+
|
| 125 |
+
[More Information Needed]
|
| 126 |
+
|
| 127 |
+
### Results
|
| 128 |
+
|
| 129 |
+
[More Information Needed]
|
| 130 |
+
|
| 131 |
+
#### Summary
|
| 132 |
+
|
| 133 |
+
|
| 134 |
+
|
| 135 |
+
## Model Examination [optional]
|
| 136 |
+
|
| 137 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 138 |
+
|
| 139 |
+
[More Information Needed]
|
| 140 |
+
|
| 141 |
+
## Environmental Impact
|
| 142 |
+
|
| 143 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 144 |
+
|
| 145 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 146 |
+
|
| 147 |
+
- **Hardware Type:** [More Information Needed]
|
| 148 |
+
- **Hours used:** [More Information Needed]
|
| 149 |
+
- **Cloud Provider:** [More Information Needed]
|
| 150 |
+
- **Compute Region:** [More Information Needed]
|
| 151 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 152 |
+
|
| 153 |
+
## Technical Specifications [optional]
|
| 154 |
+
|
| 155 |
+
### Model Architecture and Objective
|
| 156 |
+
|
| 157 |
+
[More Information Needed]
|
| 158 |
+
|
| 159 |
+
### Compute Infrastructure
|
| 160 |
+
|
| 161 |
+
[More Information Needed]
|
| 162 |
+
|
| 163 |
+
#### Hardware
|
| 164 |
+
|
| 165 |
+
[More Information Needed]
|
| 166 |
+
|
| 167 |
+
#### Software
|
| 168 |
+
|
| 169 |
+
[More Information Needed]
|
| 170 |
+
|
| 171 |
+
## Citation [optional]
|
| 172 |
+
|
| 173 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 174 |
+
|
| 175 |
+
**BibTeX:**
|
| 176 |
+
|
| 177 |
+
[More Information Needed]
|
| 178 |
+
|
| 179 |
+
**APA:**
|
| 180 |
+
|
| 181 |
+
[More Information Needed]
|
| 182 |
+
|
| 183 |
+
## Glossary [optional]
|
| 184 |
+
|
| 185 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 186 |
+
|
| 187 |
+
[More Information Needed]
|
| 188 |
+
|
| 189 |
+
## More Information [optional]
|
| 190 |
+
|
| 191 |
+
[More Information Needed]
|
| 192 |
+
|
| 193 |
+
## Model Card Authors [optional]
|
| 194 |
+
|
| 195 |
+
[More Information Needed]
|
| 196 |
+
|
| 197 |
+
## Model Card Contact
|
| 198 |
+
|
| 199 |
+
[More Information Needed]
|
| 200 |
+
### Framework versions
|
| 201 |
+
|
| 202 |
+
- PEFT 0.15.2
|
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/adapter_config.json
ADDED
|
@@ -0,0 +1,39 @@
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|
|
|
|
| 1 |
+
{
|
| 2 |
+
"alpha_pattern": {},
|
| 3 |
+
"auto_mapping": null,
|
| 4 |
+
"base_model_name_or_path": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 5 |
+
"bias": "none",
|
| 6 |
+
"corda_config": null,
|
| 7 |
+
"eva_config": null,
|
| 8 |
+
"exclude_modules": null,
|
| 9 |
+
"fan_in_fan_out": false,
|
| 10 |
+
"inference_mode": true,
|
| 11 |
+
"init_lora_weights": true,
|
| 12 |
+
"layer_replication": null,
|
| 13 |
+
"layers_pattern": null,
|
| 14 |
+
"layers_to_transform": null,
|
| 15 |
+
"loftq_config": {},
|
| 16 |
+
"lora_alpha": 32,
|
| 17 |
+
"lora_bias": false,
|
| 18 |
+
"lora_dropout": 0.05,
|
| 19 |
+
"megatron_config": null,
|
| 20 |
+
"megatron_core": "megatron.core",
|
| 21 |
+
"modules_to_save": [],
|
| 22 |
+
"peft_type": "LORA",
|
| 23 |
+
"r": 8,
|
| 24 |
+
"rank_pattern": {},
|
| 25 |
+
"revision": null,
|
| 26 |
+
"target_modules": [
|
| 27 |
+
"up_proj",
|
| 28 |
+
"o_proj",
|
| 29 |
+
"gate_proj",
|
| 30 |
+
"down_proj",
|
| 31 |
+
"v_proj",
|
| 32 |
+
"k_proj",
|
| 33 |
+
"q_proj"
|
| 34 |
+
],
|
| 35 |
+
"task_type": "CAUSAL_LM",
|
| 36 |
+
"trainable_token_indices": null,
|
| 37 |
+
"use_dora": false,
|
| 38 |
+
"use_rslora": false
|
| 39 |
+
}
|
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/additional_config.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"lora_dtype": null, "lorap_lr_ratio": null, "lorap_emb_lr": 1e-06}
|
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/args.json
ADDED
|
@@ -0,0 +1,364 @@
|
|
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|
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|
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|
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|
|
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|
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|
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|
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|
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|
|
|
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|
|
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|
|
|
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|
|
|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"model": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 3 |
+
"model_type": "qwen2_5",
|
| 4 |
+
"model_revision": null,
|
| 5 |
+
"task_type": "causal_lm",
|
| 6 |
+
"torch_dtype": "bfloat16",
|
| 7 |
+
"attn_impl": null,
|
| 8 |
+
"num_labels": null,
|
| 9 |
+
"problem_type": null,
|
| 10 |
+
"rope_scaling": null,
|
| 11 |
+
"device_map": null,
|
| 12 |
+
"max_memory": {},
|
| 13 |
+
"local_repo_path": null,
|
| 14 |
+
"template": "qwen2_5",
|
| 15 |
+
"system": null,
|
| 16 |
+
"max_length": 8192,
|
| 17 |
+
"truncation_strategy": "delete",
|
| 18 |
+
"max_pixels": null,
|
| 19 |
+
"tools_prompt": "react_en",
|
| 20 |
+
"norm_bbox": null,
|
| 21 |
+
"response_prefix": null,
|
| 22 |
+
"padding_side": "right",
|
| 23 |
+
"loss_scale": "default",
|
| 24 |
+
"sequence_parallel_size": 1,
|
| 25 |
+
"use_chat_template": true,
|
| 26 |
+
"template_backend": "swift",
|
| 27 |
+
"dataset": [
|
| 28 |
+
"/oss/wangyujia/ProtT3/ProtT3/data/sft/dataset/metal_ion_binding/train.jsonl"
|
| 29 |
+
],
|
| 30 |
+
"val_dataset": [],
|
| 31 |
+
"split_dataset_ratio": 0.01,
|
| 32 |
+
"data_seed": 42,
|
| 33 |
+
"dataset_num_proc": 128,
|
| 34 |
+
"dataset_shuffle": true,
|
| 35 |
+
"val_dataset_shuffle": false,
|
| 36 |
+
"streaming": false,
|
| 37 |
+
"interleave_prob": null,
|
| 38 |
+
"stopping_strategy": "first_exhausted",
|
| 39 |
+
"shuffle_buffer_size": 1000,
|
| 40 |
+
"enable_cache": false,
|
| 41 |
+
"download_mode": "reuse_dataset_if_exists",
|
| 42 |
+
"columns": {},
|
| 43 |
+
"strict": false,
|
| 44 |
+
"remove_unused_columns": true,
|
| 45 |
+
"model_name": [
|
| 46 |
+
"qwen_bio_sft_deeplocbinary-08022035"
|
| 47 |
+
],
|
| 48 |
+
"model_author": [
|
| 49 |
+
"swift"
|
| 50 |
+
],
|
| 51 |
+
"custom_dataset_info": [],
|
| 52 |
+
"quant_method": null,
|
| 53 |
+
"quant_bits": null,
|
| 54 |
+
"hqq_axis": null,
|
| 55 |
+
"bnb_4bit_compute_dtype": "bfloat16",
|
| 56 |
+
"bnb_4bit_quant_type": "nf4",
|
| 57 |
+
"bnb_4bit_use_double_quant": true,
|
| 58 |
+
"bnb_4bit_quant_storage": null,
|
| 59 |
+
"max_new_tokens": 64,
|
| 60 |
+
"temperature": 0.0,
|
| 61 |
+
"top_k": null,
|
| 62 |
+
"top_p": null,
|
| 63 |
+
"repetition_penalty": null,
|
| 64 |
+
"num_beams": 1,
|
| 65 |
+
"stream": false,
|
| 66 |
+
"stop_words": [],
|
| 67 |
+
"logprobs": false,
|
| 68 |
+
"top_logprobs": null,
|
| 69 |
+
"ckpt_dir": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 70 |
+
"load_dataset_config": null,
|
| 71 |
+
"lora_modules": [],
|
| 72 |
+
"tuner_backend": "peft",
|
| 73 |
+
"train_type": "lora",
|
| 74 |
+
"adapters": [],
|
| 75 |
+
"external_plugins": [],
|
| 76 |
+
"seed": 42,
|
| 77 |
+
"model_kwargs": {},
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Model(ms_model_id='Qwen/Qwen2.5-72B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-72B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-0.5B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-0.5B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-1.5B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-1.5B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-3B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-3B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-7B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-7B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-14B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-14B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-32B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-32B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-72B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-72B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-0.5B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-0.5B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-1.5B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-1.5B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-3B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-3B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-7B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-7B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-14B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-14B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-32B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-32B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-72B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-72B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None)], ignore_patterns=None, requires=None, tags=[]), ModelGroup(models=[Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B', hf_model_id='Qwen/Qwen2.5-Coder-0.5B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B', hf_model_id='Qwen/Qwen2.5-Coder-1.5B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B', hf_model_id='Qwen/Qwen2.5-Coder-3B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B', hf_model_id='Qwen/Qwen2.5-Coder-7B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B', hf_model_id='Qwen/Qwen2.5-Coder-14B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B', hf_model_id='Qwen/Qwen2.5-Coder-32B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None)], ignore_patterns=None, requires=None, tags=['coding'])], template='qwen2_5', get_function=<function get_model_tokenizer_with_flash_attn at 0x7fbf7497de10>, model_arch='llama', architectures=['Qwen2ForCausalLM'], additional_saved_files=[], torch_dtype=None, is_multimodal=False, is_reward=False, task_type=None, ignore_patterns=[], requires=['transformers>=4.37'], tags=[])",
|
| 360 |
+
"model_dir": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 361 |
+
"hub": "<class 'swift.hub.hub.MSHub'>",
|
| 362 |
+
"evaluation_strategy": "steps",
|
| 363 |
+
"training_args": "Seq2SeqTrainingArguments(output_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822', overwrite_output_dir=False, do_train=False, do_eval=True, do_predict=False, eval_strategy=<IntervalStrategy.STEPS: 'steps'>, prediction_loss_only=False, per_device_train_batch_size=2, per_device_eval_batch_size=2, per_gpu_train_batch_size=None, per_gpu_eval_batch_size=None, gradient_accumulation_steps=4, eval_accumulation_steps=None, eval_delay=0, torch_empty_cache_steps=None, learning_rate=1e-05, weight_decay=0.1, adam_beta1=0.9, adam_beta2=0.95, adam_epsilon=1e-08, max_grad_norm=1.0, num_train_epochs=3.0, max_steps=-1, lr_scheduler_type=<SchedulerType.COSINE: 'cosine'>, lr_scheduler_kwargs=None, warmup_ratio=0.05, warmup_steps=0, log_level='passive', log_level_replica='warning', log_on_each_node=True, logging_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/runs', logging_strategy=<IntervalStrategy.STEPS: 'steps'>, logging_first_step=True, logging_steps=1, logging_nan_inf_filter=True, save_strategy=<SaveStrategy.STEPS: 'steps'>, save_steps=5, save_total_limit=5, save_safetensors=True, save_on_each_node=False, save_only_model=True, restore_callback_states_from_checkpoint=False, no_cuda=False, use_cpu=False, use_mps_device=False, seed=42, data_seed=42, jit_mode_eval=False, use_ipex=False, bf16=True, fp16=False, fp16_opt_level='O1', half_precision_backend='auto', bf16_full_eval=False, fp16_full_eval=False, tf32=None, local_rank=0, ddp_backend=None, tpu_num_cores=None, tpu_metrics_debug=False, debug=[], dataloader_drop_last=False, eval_steps=5, dataloader_num_workers=1, dataloader_prefetch_factor=10, past_index=-1, run_name='/nas/shared/kilab/wangyujia/BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822', disable_tqdm=False, remove_unused_columns=False, label_names=None, load_best_model_at_end=False, metric_for_best_model='loss', greater_is_better=False, ignore_data_skip=False, fsdp=[], fsdp_min_num_params=0, fsdp_config={'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, tp_size=0, fsdp_transformer_layer_cls_to_wrap=None, accelerator_config=AcceleratorConfig(split_batches=False, dispatch_batches=False, even_batches=True, use_seedable_sampler=True, non_blocking=False, gradient_accumulation_kwargs=None, use_configured_state=False), deepspeed={'fp16': {'enabled': 'auto', 'loss_scale': 0, 'loss_scale_window': 1000, 'initial_scale_power': 16, 'hysteresis': 2, 'min_loss_scale': 1}, 'bf16': {'enabled': 'auto'}, 'zero_optimization': {'stage': 3, 'offload_optimizer': {'device': 'none', 'pin_memory': True}, 'offload_param': {'device': 'none', 'pin_memory': True}, 'overlap_comm': False, 'contiguous_gradients': True, 'sub_group_size': 1000000000.0, 'reduce_bucket_size': 'auto', 'zero_quantized_weights': False, 'zero_quantized_gradients': False, 'stage3_prefetch_bucket_size': 'auto', 'stage3_param_persistence_threshold': 'auto', 'stage3_max_live_parameters': 1000000000.0, 'stage3_max_reuse_distance': 1000000000.0, 'stage3_gather_16bit_weights_on_model_save': True}, 'gradient_accumulation_steps': 'auto', 'gradient_clipping': 'auto', 'steps_per_print': 2000, 'train_batch_size': 'auto', 'train_micro_batch_size_per_gpu': 'auto', 'wall_clock_breakdown': False}, label_smoothing_factor=0.0, optim=<OptimizerNames.ADAMW_TORCH: 'adamw_torch'>, optim_args=None, adafactor=False, group_by_length=False, length_column_name='length', report_to=['tensorboard'], ddp_find_unused_parameters=None, ddp_bucket_cap_mb=None, ddp_broadcast_buffers=None, dataloader_pin_memory=True, dataloader_persistent_workers=False, skip_memory_metrics=True, use_legacy_prediction_loop=False, push_to_hub=False, resume_from_checkpoint=None, hub_model_id=None, hub_strategy=<HubStrategy.EVERY_SAVE: 'every_save'>, hub_token=None, hub_private_repo=None, hub_always_push=False, gradient_checkpointing=True, gradient_checkpointing_kwargs=None, include_inputs_for_metrics=False, include_for_metrics=[], eval_do_concat_batches=True, fp16_backend='auto', push_to_hub_model_id=None, push_to_hub_organization=None, push_to_hub_token=None, mp_parameters='', auto_find_batch_size=False, full_determinism=False, torchdynamo=None, ray_scope='last', ddp_timeout=1800, torch_compile=False, torch_compile_backend=None, torch_compile_mode=None, include_tokens_per_second=None, include_num_input_tokens_seen=None, neftune_noise_alpha=None, optim_target_modules=None, batch_eval_metrics=False, eval_on_start=False, use_liger_kernel=False, eval_use_gather_object=False, average_tokens_across_devices=None, sortish_sampler=False, predict_with_generate=False, generation_max_length=None, generation_num_beams=None, generation_config=None, check_model=True, acc_strategy='token', train_dataloader_shuffle=True, metric_warmup_step=0, fsdp_num=1, acc_steps=1, eval_use_evalscope=False, eval_datasets=[], eval_limit=None, eval_datasets_args=None, eval_generation_config=None, train_type='lora', optimizer=None, local_repo_path=None, galore_config=None)"
|
| 364 |
+
}
|
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85/trainer_state.json
ADDED
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@@ -0,0 +1,1037 @@
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|
| 1 |
+
{
|
| 2 |
+
"best_global_step": 85,
|
| 3 |
+
"best_metric": 0.34519535,
|
| 4 |
+
"best_model_checkpoint": "/nas/shared/kilab/wangyujia/BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/checkpoint-85",
|
| 5 |
+
"epoch": 0.9577464788732394,
|
| 6 |
+
"eval_steps": 5,
|
| 7 |
+
"global_step": 85,
|
| 8 |
+
"is_hyper_param_search": false,
|
| 9 |
+
"is_local_process_zero": true,
|
| 10 |
+
"is_world_process_zero": true,
|
| 11 |
+
"log_history": [
|
| 12 |
+
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BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/images/train_train_samples_per_second.png
ADDED
|
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/images/train_train_speed(iter_s).png
ADDED
|
BIO/sft/qwen-metal_ion_binding-08022141/v0-20250802-215822/images/train_train_steps_per_second.png
ADDED
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/args.json
ADDED
|
@@ -0,0 +1,364 @@
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| 1 |
+
{
|
| 2 |
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| 3 |
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| 26 |
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| 27 |
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|
| 28 |
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"/nas/shared/kilab/wangyujia/material_production_train.jsonl"
|
| 29 |
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],
|
| 30 |
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| 31 |
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| 32 |
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| 42 |
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| 45 |
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| 46 |
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| 47 |
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| 48 |
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| 49 |
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| 50 |
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| 56 |
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| 86 |
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| 87 |
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| 88 |
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| 113 |
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| 114 |
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| 115 |
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| 116 |
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| 117 |
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| 118 |
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| 125 |
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| 126 |
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hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None)], ignore_patterns=None, requires=None, tags=['coding'])], template='qwen2_5', get_function=<function get_model_tokenizer_with_flash_attn at 0x7f22ea5f5e10>, model_arch='llama', architectures=['Qwen2ForCausalLM'], additional_saved_files=[], torch_dtype=None, is_multimodal=False, is_reward=False, task_type=None, ignore_patterns=[], requires=['transformers>=4.37'], tags=[])",
|
| 360 |
+
"model_dir": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 361 |
+
"hub": "<class 'swift.hub.hub.MSHub'>",
|
| 362 |
+
"evaluation_strategy": "steps",
|
| 363 |
+
"training_args": "Seq2SeqTrainingArguments(output_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250', overwrite_output_dir=False, do_train=False, do_eval=True, do_predict=False, eval_strategy=<IntervalStrategy.STEPS: 'steps'>, prediction_loss_only=False, per_device_train_batch_size=2, per_device_eval_batch_size=2, per_gpu_train_batch_size=None, per_gpu_eval_batch_size=None, gradient_accumulation_steps=4, eval_accumulation_steps=None, eval_delay=0, torch_empty_cache_steps=None, learning_rate=1e-05, weight_decay=0.1, adam_beta1=0.9, adam_beta2=0.95, adam_epsilon=1e-08, max_grad_norm=1.0, num_train_epochs=3.0, max_steps=-1, lr_scheduler_type=<SchedulerType.COSINE: 'cosine'>, lr_scheduler_kwargs=None, warmup_ratio=0.05, warmup_steps=0, log_level='passive', log_level_replica='warning', log_on_each_node=True, logging_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250/runs', logging_strategy=<IntervalStrategy.STEPS: 'steps'>, logging_first_step=True, logging_steps=1, logging_nan_inf_filter=True, save_strategy=<SaveStrategy.STEPS: 'steps'>, save_steps=5, save_total_limit=5, save_safetensors=True, save_on_each_node=False, save_only_model=True, restore_callback_states_from_checkpoint=False, no_cuda=False, use_cpu=False, use_mps_device=False, seed=42, data_seed=42, jit_mode_eval=False, use_ipex=False, bf16=True, fp16=False, fp16_opt_level='O1', half_precision_backend='auto', bf16_full_eval=False, fp16_full_eval=False, tf32=None, local_rank=0, ddp_backend=None, tpu_num_cores=None, tpu_metrics_debug=False, debug=[], dataloader_drop_last=False, eval_steps=5, dataloader_num_workers=1, dataloader_prefetch_factor=10, past_index=-1, run_name='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250', disable_tqdm=False, remove_unused_columns=False, label_names=None, load_best_model_at_end=False, metric_for_best_model='loss', greater_is_better=False, ignore_data_skip=False, fsdp=[], fsdp_min_num_params=0, fsdp_config={'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, tp_size=0, fsdp_transformer_layer_cls_to_wrap=None, accelerator_config=AcceleratorConfig(split_batches=False, dispatch_batches=False, even_batches=True, use_seedable_sampler=True, non_blocking=False, gradient_accumulation_kwargs=None, use_configured_state=False), deepspeed={'fp16': {'enabled': 'auto', 'loss_scale': 0, 'loss_scale_window': 1000, 'initial_scale_power': 16, 'hysteresis': 2, 'min_loss_scale': 1}, 'bf16': {'enabled': 'auto'}, 'zero_optimization': {'stage': 3, 'offload_optimizer': {'device': 'none', 'pin_memory': True}, 'offload_param': {'device': 'none', 'pin_memory': True}, 'overlap_comm': False, 'contiguous_gradients': True, 'sub_group_size': 1000000000.0, 'reduce_bucket_size': 'auto', 'zero_quantized_weights': False, 'zero_quantized_gradients': False, 'stage3_prefetch_bucket_size': 'auto', 'stage3_param_persistence_threshold': 'auto', 'stage3_max_live_parameters': 1000000000.0, 'stage3_max_reuse_distance': 1000000000.0, 'stage3_gather_16bit_weights_on_model_save': True}, 'gradient_accumulation_steps': 'auto', 'gradient_clipping': 'auto', 'steps_per_print': 2000, 'train_batch_size': 'auto', 'train_micro_batch_size_per_gpu': 'auto', 'wall_clock_breakdown': False}, label_smoothing_factor=0.0, optim=<OptimizerNames.ADAMW_TORCH: 'adamw_torch'>, optim_args=None, adafactor=False, group_by_length=False, length_column_name='length', report_to=['tensorboard'], ddp_find_unused_parameters=None, ddp_bucket_cap_mb=None, ddp_broadcast_buffers=None, dataloader_pin_memory=True, dataloader_persistent_workers=False, skip_memory_metrics=True, use_legacy_prediction_loop=False, push_to_hub=False, resume_from_checkpoint=None, hub_model_id=None, hub_strategy=<HubStrategy.EVERY_SAVE: 'every_save'>, hub_token=None, hub_private_repo=None, hub_always_push=False, gradient_checkpointing=True, gradient_checkpointing_kwargs=None, include_inputs_for_metrics=False, include_for_metrics=[], eval_do_concat_batches=True, fp16_backend='auto', push_to_hub_model_id=None, push_to_hub_organization=None, push_to_hub_token=None, mp_parameters='', auto_find_batch_size=False, full_determinism=False, torchdynamo=None, ray_scope='last', ddp_timeout=1800, torch_compile=False, torch_compile_backend=None, torch_compile_mode=None, include_tokens_per_second=None, include_num_input_tokens_seen=None, neftune_noise_alpha=None, optim_target_modules=None, batch_eval_metrics=False, eval_on_start=False, use_liger_kernel=False, eval_use_gather_object=False, average_tokens_across_devices=None, sortish_sampler=False, predict_with_generate=False, generation_max_length=None, generation_num_beams=None, generation_config=None, check_model=True, acc_strategy='token', train_dataloader_shuffle=True, metric_warmup_step=0, fsdp_num=1, acc_steps=1, eval_use_evalscope=False, eval_datasets=[], eval_limit=None, eval_datasets_args=None, eval_generation_config=None, train_type='lora', optimizer=None, local_repo_path=None, galore_config=None)"
|
| 364 |
+
}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1015/README.md
ADDED
|
@@ -0,0 +1,202 @@
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|
| 1 |
+
---
|
| 2 |
+
base_model: /oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged
|
| 3 |
+
library_name: peft
|
| 4 |
+
---
|
| 5 |
+
|
| 6 |
+
# Model Card for Model ID
|
| 7 |
+
|
| 8 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 9 |
+
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
## Model Details
|
| 13 |
+
|
| 14 |
+
### Model Description
|
| 15 |
+
|
| 16 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 17 |
+
|
| 18 |
+
|
| 19 |
+
|
| 20 |
+
- **Developed by:** [More Information Needed]
|
| 21 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 22 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 23 |
+
- **Model type:** [More Information Needed]
|
| 24 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 25 |
+
- **License:** [More Information Needed]
|
| 26 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 27 |
+
|
| 28 |
+
### Model Sources [optional]
|
| 29 |
+
|
| 30 |
+
<!-- Provide the basic links for the model. -->
|
| 31 |
+
|
| 32 |
+
- **Repository:** [More Information Needed]
|
| 33 |
+
- **Paper [optional]:** [More Information Needed]
|
| 34 |
+
- **Demo [optional]:** [More Information Needed]
|
| 35 |
+
|
| 36 |
+
## Uses
|
| 37 |
+
|
| 38 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 39 |
+
|
| 40 |
+
### Direct Use
|
| 41 |
+
|
| 42 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 43 |
+
|
| 44 |
+
[More Information Needed]
|
| 45 |
+
|
| 46 |
+
### Downstream Use [optional]
|
| 47 |
+
|
| 48 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 49 |
+
|
| 50 |
+
[More Information Needed]
|
| 51 |
+
|
| 52 |
+
### Out-of-Scope Use
|
| 53 |
+
|
| 54 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 55 |
+
|
| 56 |
+
[More Information Needed]
|
| 57 |
+
|
| 58 |
+
## Bias, Risks, and Limitations
|
| 59 |
+
|
| 60 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 61 |
+
|
| 62 |
+
[More Information Needed]
|
| 63 |
+
|
| 64 |
+
### Recommendations
|
| 65 |
+
|
| 66 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 67 |
+
|
| 68 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 69 |
+
|
| 70 |
+
## How to Get Started with the Model
|
| 71 |
+
|
| 72 |
+
Use the code below to get started with the model.
|
| 73 |
+
|
| 74 |
+
[More Information Needed]
|
| 75 |
+
|
| 76 |
+
## Training Details
|
| 77 |
+
|
| 78 |
+
### Training Data
|
| 79 |
+
|
| 80 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 81 |
+
|
| 82 |
+
[More Information Needed]
|
| 83 |
+
|
| 84 |
+
### Training Procedure
|
| 85 |
+
|
| 86 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 87 |
+
|
| 88 |
+
#### Preprocessing [optional]
|
| 89 |
+
|
| 90 |
+
[More Information Needed]
|
| 91 |
+
|
| 92 |
+
|
| 93 |
+
#### Training Hyperparameters
|
| 94 |
+
|
| 95 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 96 |
+
|
| 97 |
+
#### Speeds, Sizes, Times [optional]
|
| 98 |
+
|
| 99 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 100 |
+
|
| 101 |
+
[More Information Needed]
|
| 102 |
+
|
| 103 |
+
## Evaluation
|
| 104 |
+
|
| 105 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 106 |
+
|
| 107 |
+
### Testing Data, Factors & Metrics
|
| 108 |
+
|
| 109 |
+
#### Testing Data
|
| 110 |
+
|
| 111 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 112 |
+
|
| 113 |
+
[More Information Needed]
|
| 114 |
+
|
| 115 |
+
#### Factors
|
| 116 |
+
|
| 117 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 118 |
+
|
| 119 |
+
[More Information Needed]
|
| 120 |
+
|
| 121 |
+
#### Metrics
|
| 122 |
+
|
| 123 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 124 |
+
|
| 125 |
+
[More Information Needed]
|
| 126 |
+
|
| 127 |
+
### Results
|
| 128 |
+
|
| 129 |
+
[More Information Needed]
|
| 130 |
+
|
| 131 |
+
#### Summary
|
| 132 |
+
|
| 133 |
+
|
| 134 |
+
|
| 135 |
+
## Model Examination [optional]
|
| 136 |
+
|
| 137 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 138 |
+
|
| 139 |
+
[More Information Needed]
|
| 140 |
+
|
| 141 |
+
## Environmental Impact
|
| 142 |
+
|
| 143 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 144 |
+
|
| 145 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 146 |
+
|
| 147 |
+
- **Hardware Type:** [More Information Needed]
|
| 148 |
+
- **Hours used:** [More Information Needed]
|
| 149 |
+
- **Cloud Provider:** [More Information Needed]
|
| 150 |
+
- **Compute Region:** [More Information Needed]
|
| 151 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 152 |
+
|
| 153 |
+
## Technical Specifications [optional]
|
| 154 |
+
|
| 155 |
+
### Model Architecture and Objective
|
| 156 |
+
|
| 157 |
+
[More Information Needed]
|
| 158 |
+
|
| 159 |
+
### Compute Infrastructure
|
| 160 |
+
|
| 161 |
+
[More Information Needed]
|
| 162 |
+
|
| 163 |
+
#### Hardware
|
| 164 |
+
|
| 165 |
+
[More Information Needed]
|
| 166 |
+
|
| 167 |
+
#### Software
|
| 168 |
+
|
| 169 |
+
[More Information Needed]
|
| 170 |
+
|
| 171 |
+
## Citation [optional]
|
| 172 |
+
|
| 173 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 174 |
+
|
| 175 |
+
**BibTeX:**
|
| 176 |
+
|
| 177 |
+
[More Information Needed]
|
| 178 |
+
|
| 179 |
+
**APA:**
|
| 180 |
+
|
| 181 |
+
[More Information Needed]
|
| 182 |
+
|
| 183 |
+
## Glossary [optional]
|
| 184 |
+
|
| 185 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 186 |
+
|
| 187 |
+
[More Information Needed]
|
| 188 |
+
|
| 189 |
+
## More Information [optional]
|
| 190 |
+
|
| 191 |
+
[More Information Needed]
|
| 192 |
+
|
| 193 |
+
## Model Card Authors [optional]
|
| 194 |
+
|
| 195 |
+
[More Information Needed]
|
| 196 |
+
|
| 197 |
+
## Model Card Contact
|
| 198 |
+
|
| 199 |
+
[More Information Needed]
|
| 200 |
+
### Framework versions
|
| 201 |
+
|
| 202 |
+
- PEFT 0.15.2
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1015/adapter_config.json
ADDED
|
@@ -0,0 +1,39 @@
|
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|
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|
|
|
| 1 |
+
{
|
| 2 |
+
"alpha_pattern": {},
|
| 3 |
+
"auto_mapping": null,
|
| 4 |
+
"base_model_name_or_path": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 5 |
+
"bias": "none",
|
| 6 |
+
"corda_config": null,
|
| 7 |
+
"eva_config": null,
|
| 8 |
+
"exclude_modules": null,
|
| 9 |
+
"fan_in_fan_out": false,
|
| 10 |
+
"inference_mode": true,
|
| 11 |
+
"init_lora_weights": true,
|
| 12 |
+
"layer_replication": null,
|
| 13 |
+
"layers_pattern": null,
|
| 14 |
+
"layers_to_transform": null,
|
| 15 |
+
"loftq_config": {},
|
| 16 |
+
"lora_alpha": 32,
|
| 17 |
+
"lora_bias": false,
|
| 18 |
+
"lora_dropout": 0.05,
|
| 19 |
+
"megatron_config": null,
|
| 20 |
+
"megatron_core": "megatron.core",
|
| 21 |
+
"modules_to_save": [],
|
| 22 |
+
"peft_type": "LORA",
|
| 23 |
+
"r": 8,
|
| 24 |
+
"rank_pattern": {},
|
| 25 |
+
"revision": null,
|
| 26 |
+
"target_modules": [
|
| 27 |
+
"v_proj",
|
| 28 |
+
"down_proj",
|
| 29 |
+
"k_proj",
|
| 30 |
+
"up_proj",
|
| 31 |
+
"gate_proj",
|
| 32 |
+
"q_proj",
|
| 33 |
+
"o_proj"
|
| 34 |
+
],
|
| 35 |
+
"task_type": "CAUSAL_LM",
|
| 36 |
+
"trainable_token_indices": null,
|
| 37 |
+
"use_dora": false,
|
| 38 |
+
"use_rslora": false
|
| 39 |
+
}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1015/additional_config.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"lora_dtype": null, "lorap_lr_ratio": null, "lorap_emb_lr": 1e-06}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1015/args.json
ADDED
|
@@ -0,0 +1,364 @@
|
|
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|
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|
|
|
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|
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|
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|
|
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|
|
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|
|
|
|
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|
|
|
|
|
|
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|
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|
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|
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|
|
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|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
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|
|
|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
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|
|
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|
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|
|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"model": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 3 |
+
"model_type": "qwen2_5",
|
| 4 |
+
"model_revision": null,
|
| 5 |
+
"task_type": "causal_lm",
|
| 6 |
+
"torch_dtype": "bfloat16",
|
| 7 |
+
"attn_impl": null,
|
| 8 |
+
"num_labels": null,
|
| 9 |
+
"problem_type": null,
|
| 10 |
+
"rope_scaling": null,
|
| 11 |
+
"device_map": null,
|
| 12 |
+
"max_memory": {},
|
| 13 |
+
"local_repo_path": null,
|
| 14 |
+
"template": "qwen2_5",
|
| 15 |
+
"system": null,
|
| 16 |
+
"max_length": 8192,
|
| 17 |
+
"truncation_strategy": "delete",
|
| 18 |
+
"max_pixels": null,
|
| 19 |
+
"tools_prompt": "react_en",
|
| 20 |
+
"norm_bbox": null,
|
| 21 |
+
"response_prefix": null,
|
| 22 |
+
"padding_side": "right",
|
| 23 |
+
"loss_scale": "default",
|
| 24 |
+
"sequence_parallel_size": 1,
|
| 25 |
+
"use_chat_template": true,
|
| 26 |
+
"template_backend": "swift",
|
| 27 |
+
"dataset": [
|
| 28 |
+
"/nas/shared/kilab/wangyujia/material_production_train.jsonl"
|
| 29 |
+
],
|
| 30 |
+
"val_dataset": [],
|
| 31 |
+
"split_dataset_ratio": 0.01,
|
| 32 |
+
"data_seed": 42,
|
| 33 |
+
"dataset_num_proc": 128,
|
| 34 |
+
"dataset_shuffle": true,
|
| 35 |
+
"val_dataset_shuffle": false,
|
| 36 |
+
"streaming": false,
|
| 37 |
+
"interleave_prob": null,
|
| 38 |
+
"stopping_strategy": "first_exhausted",
|
| 39 |
+
"shuffle_buffer_size": 1000,
|
| 40 |
+
"enable_cache": false,
|
| 41 |
+
"download_mode": "reuse_dataset_if_exists",
|
| 42 |
+
"columns": {},
|
| 43 |
+
"strict": false,
|
| 44 |
+
"remove_unused_columns": true,
|
| 45 |
+
"model_name": [
|
| 46 |
+
"qwen_bio_sft_deeplocbinary-08022035"
|
| 47 |
+
],
|
| 48 |
+
"model_author": [
|
| 49 |
+
"swift"
|
| 50 |
+
],
|
| 51 |
+
"custom_dataset_info": [],
|
| 52 |
+
"quant_method": null,
|
| 53 |
+
"quant_bits": null,
|
| 54 |
+
"hqq_axis": null,
|
| 55 |
+
"bnb_4bit_compute_dtype": "bfloat16",
|
| 56 |
+
"bnb_4bit_quant_type": "nf4",
|
| 57 |
+
"bnb_4bit_use_double_quant": true,
|
| 58 |
+
"bnb_4bit_quant_storage": null,
|
| 59 |
+
"max_new_tokens": 64,
|
| 60 |
+
"temperature": 0.0,
|
| 61 |
+
"top_k": null,
|
| 62 |
+
"top_p": null,
|
| 63 |
+
"repetition_penalty": null,
|
| 64 |
+
"num_beams": 1,
|
| 65 |
+
"stream": false,
|
| 66 |
+
"stop_words": [],
|
| 67 |
+
"logprobs": false,
|
| 68 |
+
"top_logprobs": null,
|
| 69 |
+
"ckpt_dir": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 70 |
+
"load_dataset_config": null,
|
| 71 |
+
"lora_modules": [],
|
| 72 |
+
"tuner_backend": "peft",
|
| 73 |
+
"train_type": "lora",
|
| 74 |
+
"adapters": [],
|
| 75 |
+
"external_plugins": [],
|
| 76 |
+
"seed": 42,
|
| 77 |
+
"model_kwargs": {},
|
| 78 |
+
"load_args": false,
|
| 79 |
+
"load_data_args": false,
|
| 80 |
+
"use_hf": false,
|
| 81 |
+
"hub_token": null,
|
| 82 |
+
"custom_register_path": [],
|
| 83 |
+
"ignore_args_error": false,
|
| 84 |
+
"use_swift_lora": false,
|
| 85 |
+
"output_dir": "/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250",
|
| 86 |
+
"overwrite_output_dir": false,
|
| 87 |
+
"do_train": false,
|
| 88 |
+
"do_eval": false,
|
| 89 |
+
"do_predict": false,
|
| 90 |
+
"eval_strategy": "steps",
|
| 91 |
+
"prediction_loss_only": false,
|
| 92 |
+
"per_device_train_batch_size": 2,
|
| 93 |
+
"per_device_eval_batch_size": 2,
|
| 94 |
+
"per_gpu_train_batch_size": null,
|
| 95 |
+
"per_gpu_eval_batch_size": null,
|
| 96 |
+
"gradient_accumulation_steps": 4,
|
| 97 |
+
"eval_accumulation_steps": null,
|
| 98 |
+
"eval_delay": 0,
|
| 99 |
+
"torch_empty_cache_steps": null,
|
| 100 |
+
"learning_rate": 1e-05,
|
| 101 |
+
"weight_decay": 0.1,
|
| 102 |
+
"adam_beta1": 0.9,
|
| 103 |
+
"adam_beta2": 0.95,
|
| 104 |
+
"adam_epsilon": 1e-08,
|
| 105 |
+
"max_grad_norm": 1.0,
|
| 106 |
+
"num_train_epochs": 3.0,
|
| 107 |
+
"max_steps": -1,
|
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hf_model_id='Qwen/Qwen2.5-14B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-32B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-32B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-72B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-72B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None)], ignore_patterns=None, requires=None, tags=[]), ModelGroup(models=[Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B', hf_model_id='Qwen/Qwen2.5-Coder-0.5B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B', hf_model_id='Qwen/Qwen2.5-Coder-1.5B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B', hf_model_id='Qwen/Qwen2.5-Coder-3B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B', hf_model_id='Qwen/Qwen2.5-Coder-7B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B', hf_model_id='Qwen/Qwen2.5-Coder-14B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B', hf_model_id='Qwen/Qwen2.5-Coder-32B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None)], ignore_patterns=None, requires=None, tags=['coding'])], template='qwen2_5', get_function=<function get_model_tokenizer_with_flash_attn at 0x7f22ea5f5e10>, model_arch='llama', architectures=['Qwen2ForCausalLM'], additional_saved_files=[], torch_dtype=None, is_multimodal=False, is_reward=False, task_type=None, ignore_patterns=[], requires=['transformers>=4.37'], tags=[])",
|
| 360 |
+
"model_dir": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 361 |
+
"hub": "<class 'swift.hub.hub.MSHub'>",
|
| 362 |
+
"evaluation_strategy": "steps",
|
| 363 |
+
"training_args": "Seq2SeqTrainingArguments(output_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250', overwrite_output_dir=False, do_train=False, do_eval=True, do_predict=False, eval_strategy=<IntervalStrategy.STEPS: 'steps'>, prediction_loss_only=False, per_device_train_batch_size=2, per_device_eval_batch_size=2, per_gpu_train_batch_size=None, per_gpu_eval_batch_size=None, gradient_accumulation_steps=4, eval_accumulation_steps=None, eval_delay=0, torch_empty_cache_steps=None, learning_rate=1e-05, weight_decay=0.1, adam_beta1=0.9, adam_beta2=0.95, adam_epsilon=1e-08, max_grad_norm=1.0, num_train_epochs=3.0, max_steps=-1, lr_scheduler_type=<SchedulerType.COSINE: 'cosine'>, lr_scheduler_kwargs=None, warmup_ratio=0.05, warmup_steps=0, log_level='passive', log_level_replica='warning', log_on_each_node=True, logging_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250/runs', logging_strategy=<IntervalStrategy.STEPS: 'steps'>, logging_first_step=True, logging_steps=1, logging_nan_inf_filter=True, save_strategy=<SaveStrategy.STEPS: 'steps'>, save_steps=5, save_total_limit=5, save_safetensors=True, save_on_each_node=False, save_only_model=True, restore_callback_states_from_checkpoint=False, no_cuda=False, use_cpu=False, use_mps_device=False, seed=42, data_seed=42, jit_mode_eval=False, use_ipex=False, bf16=True, fp16=False, fp16_opt_level='O1', half_precision_backend='auto', bf16_full_eval=False, fp16_full_eval=False, tf32=None, local_rank=0, ddp_backend=None, tpu_num_cores=None, tpu_metrics_debug=False, debug=[], dataloader_drop_last=False, eval_steps=5, dataloader_num_workers=1, dataloader_prefetch_factor=10, past_index=-1, run_name='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250', disable_tqdm=False, remove_unused_columns=False, label_names=None, load_best_model_at_end=False, metric_for_best_model='loss', greater_is_better=False, ignore_data_skip=False, fsdp=[], fsdp_min_num_params=0, fsdp_config={'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, tp_size=0, fsdp_transformer_layer_cls_to_wrap=None, accelerator_config=AcceleratorConfig(split_batches=False, dispatch_batches=False, even_batches=True, use_seedable_sampler=True, non_blocking=False, gradient_accumulation_kwargs=None, use_configured_state=False), deepspeed={'fp16': {'enabled': 'auto', 'loss_scale': 0, 'loss_scale_window': 1000, 'initial_scale_power': 16, 'hysteresis': 2, 'min_loss_scale': 1}, 'bf16': {'enabled': 'auto'}, 'zero_optimization': {'stage': 3, 'offload_optimizer': {'device': 'none', 'pin_memory': True}, 'offload_param': {'device': 'none', 'pin_memory': True}, 'overlap_comm': False, 'contiguous_gradients': True, 'sub_group_size': 1000000000.0, 'reduce_bucket_size': 'auto', 'zero_quantized_weights': False, 'zero_quantized_gradients': False, 'stage3_prefetch_bucket_size': 'auto', 'stage3_param_persistence_threshold': 'auto', 'stage3_max_live_parameters': 1000000000.0, 'stage3_max_reuse_distance': 1000000000.0, 'stage3_gather_16bit_weights_on_model_save': True}, 'gradient_accumulation_steps': 'auto', 'gradient_clipping': 'auto', 'steps_per_print': 2000, 'train_batch_size': 'auto', 'train_micro_batch_size_per_gpu': 'auto', 'wall_clock_breakdown': False}, label_smoothing_factor=0.0, optim=<OptimizerNames.ADAMW_TORCH: 'adamw_torch'>, optim_args=None, adafactor=False, group_by_length=False, length_column_name='length', report_to=['tensorboard'], ddp_find_unused_parameters=None, ddp_bucket_cap_mb=None, ddp_broadcast_buffers=None, dataloader_pin_memory=True, dataloader_persistent_workers=False, skip_memory_metrics=True, use_legacy_prediction_loop=False, push_to_hub=False, resume_from_checkpoint=None, hub_model_id=None, hub_strategy=<HubStrategy.EVERY_SAVE: 'every_save'>, hub_token=None, hub_private_repo=None, hub_always_push=False, gradient_checkpointing=True, gradient_checkpointing_kwargs=None, include_inputs_for_metrics=False, include_for_metrics=[], eval_do_concat_batches=True, fp16_backend='auto', push_to_hub_model_id=None, push_to_hub_organization=None, push_to_hub_token=None, mp_parameters='', auto_find_batch_size=False, full_determinism=False, torchdynamo=None, ray_scope='last', ddp_timeout=1800, torch_compile=False, torch_compile_backend=None, torch_compile_mode=None, include_tokens_per_second=None, include_num_input_tokens_seen=None, neftune_noise_alpha=None, optim_target_modules=None, batch_eval_metrics=False, eval_on_start=False, use_liger_kernel=False, eval_use_gather_object=False, average_tokens_across_devices=None, sortish_sampler=False, predict_with_generate=False, generation_max_length=None, generation_num_beams=None, generation_config=None, check_model=True, acc_strategy='token', train_dataloader_shuffle=True, metric_warmup_step=0, fsdp_num=1, acc_steps=1, eval_use_evalscope=False, eval_datasets=[], eval_limit=None, eval_datasets_args=None, eval_generation_config=None, train_type='lora', optimizer=None, local_repo_path=None, galore_config=None)"
|
| 364 |
+
}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1015/trainer_state.json
ADDED
|
The diff for this file is too large to render.
See raw diff
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BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1020/README.md
ADDED
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| 1 |
+
---
|
| 2 |
+
base_model: /oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged
|
| 3 |
+
library_name: peft
|
| 4 |
+
---
|
| 5 |
+
|
| 6 |
+
# Model Card for Model ID
|
| 7 |
+
|
| 8 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 9 |
+
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
## Model Details
|
| 13 |
+
|
| 14 |
+
### Model Description
|
| 15 |
+
|
| 16 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 17 |
+
|
| 18 |
+
|
| 19 |
+
|
| 20 |
+
- **Developed by:** [More Information Needed]
|
| 21 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 22 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 23 |
+
- **Model type:** [More Information Needed]
|
| 24 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 25 |
+
- **License:** [More Information Needed]
|
| 26 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 27 |
+
|
| 28 |
+
### Model Sources [optional]
|
| 29 |
+
|
| 30 |
+
<!-- Provide the basic links for the model. -->
|
| 31 |
+
|
| 32 |
+
- **Repository:** [More Information Needed]
|
| 33 |
+
- **Paper [optional]:** [More Information Needed]
|
| 34 |
+
- **Demo [optional]:** [More Information Needed]
|
| 35 |
+
|
| 36 |
+
## Uses
|
| 37 |
+
|
| 38 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 39 |
+
|
| 40 |
+
### Direct Use
|
| 41 |
+
|
| 42 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 43 |
+
|
| 44 |
+
[More Information Needed]
|
| 45 |
+
|
| 46 |
+
### Downstream Use [optional]
|
| 47 |
+
|
| 48 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 49 |
+
|
| 50 |
+
[More Information Needed]
|
| 51 |
+
|
| 52 |
+
### Out-of-Scope Use
|
| 53 |
+
|
| 54 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 55 |
+
|
| 56 |
+
[More Information Needed]
|
| 57 |
+
|
| 58 |
+
## Bias, Risks, and Limitations
|
| 59 |
+
|
| 60 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 61 |
+
|
| 62 |
+
[More Information Needed]
|
| 63 |
+
|
| 64 |
+
### Recommendations
|
| 65 |
+
|
| 66 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 67 |
+
|
| 68 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 69 |
+
|
| 70 |
+
## How to Get Started with the Model
|
| 71 |
+
|
| 72 |
+
Use the code below to get started with the model.
|
| 73 |
+
|
| 74 |
+
[More Information Needed]
|
| 75 |
+
|
| 76 |
+
## Training Details
|
| 77 |
+
|
| 78 |
+
### Training Data
|
| 79 |
+
|
| 80 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 81 |
+
|
| 82 |
+
[More Information Needed]
|
| 83 |
+
|
| 84 |
+
### Training Procedure
|
| 85 |
+
|
| 86 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 87 |
+
|
| 88 |
+
#### Preprocessing [optional]
|
| 89 |
+
|
| 90 |
+
[More Information Needed]
|
| 91 |
+
|
| 92 |
+
|
| 93 |
+
#### Training Hyperparameters
|
| 94 |
+
|
| 95 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 96 |
+
|
| 97 |
+
#### Speeds, Sizes, Times [optional]
|
| 98 |
+
|
| 99 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 100 |
+
|
| 101 |
+
[More Information Needed]
|
| 102 |
+
|
| 103 |
+
## Evaluation
|
| 104 |
+
|
| 105 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 106 |
+
|
| 107 |
+
### Testing Data, Factors & Metrics
|
| 108 |
+
|
| 109 |
+
#### Testing Data
|
| 110 |
+
|
| 111 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 112 |
+
|
| 113 |
+
[More Information Needed]
|
| 114 |
+
|
| 115 |
+
#### Factors
|
| 116 |
+
|
| 117 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 118 |
+
|
| 119 |
+
[More Information Needed]
|
| 120 |
+
|
| 121 |
+
#### Metrics
|
| 122 |
+
|
| 123 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 124 |
+
|
| 125 |
+
[More Information Needed]
|
| 126 |
+
|
| 127 |
+
### Results
|
| 128 |
+
|
| 129 |
+
[More Information Needed]
|
| 130 |
+
|
| 131 |
+
#### Summary
|
| 132 |
+
|
| 133 |
+
|
| 134 |
+
|
| 135 |
+
## Model Examination [optional]
|
| 136 |
+
|
| 137 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 138 |
+
|
| 139 |
+
[More Information Needed]
|
| 140 |
+
|
| 141 |
+
## Environmental Impact
|
| 142 |
+
|
| 143 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 144 |
+
|
| 145 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 146 |
+
|
| 147 |
+
- **Hardware Type:** [More Information Needed]
|
| 148 |
+
- **Hours used:** [More Information Needed]
|
| 149 |
+
- **Cloud Provider:** [More Information Needed]
|
| 150 |
+
- **Compute Region:** [More Information Needed]
|
| 151 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 152 |
+
|
| 153 |
+
## Technical Specifications [optional]
|
| 154 |
+
|
| 155 |
+
### Model Architecture and Objective
|
| 156 |
+
|
| 157 |
+
[More Information Needed]
|
| 158 |
+
|
| 159 |
+
### Compute Infrastructure
|
| 160 |
+
|
| 161 |
+
[More Information Needed]
|
| 162 |
+
|
| 163 |
+
#### Hardware
|
| 164 |
+
|
| 165 |
+
[More Information Needed]
|
| 166 |
+
|
| 167 |
+
#### Software
|
| 168 |
+
|
| 169 |
+
[More Information Needed]
|
| 170 |
+
|
| 171 |
+
## Citation [optional]
|
| 172 |
+
|
| 173 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 174 |
+
|
| 175 |
+
**BibTeX:**
|
| 176 |
+
|
| 177 |
+
[More Information Needed]
|
| 178 |
+
|
| 179 |
+
**APA:**
|
| 180 |
+
|
| 181 |
+
[More Information Needed]
|
| 182 |
+
|
| 183 |
+
## Glossary [optional]
|
| 184 |
+
|
| 185 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 186 |
+
|
| 187 |
+
[More Information Needed]
|
| 188 |
+
|
| 189 |
+
## More Information [optional]
|
| 190 |
+
|
| 191 |
+
[More Information Needed]
|
| 192 |
+
|
| 193 |
+
## Model Card Authors [optional]
|
| 194 |
+
|
| 195 |
+
[More Information Needed]
|
| 196 |
+
|
| 197 |
+
## Model Card Contact
|
| 198 |
+
|
| 199 |
+
[More Information Needed]
|
| 200 |
+
### Framework versions
|
| 201 |
+
|
| 202 |
+
- PEFT 0.15.2
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1020/adapter_config.json
ADDED
|
@@ -0,0 +1,39 @@
|
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|
|
|
|
|
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|
|
|
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|
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|
|
|
| 1 |
+
{
|
| 2 |
+
"alpha_pattern": {},
|
| 3 |
+
"auto_mapping": null,
|
| 4 |
+
"base_model_name_or_path": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 5 |
+
"bias": "none",
|
| 6 |
+
"corda_config": null,
|
| 7 |
+
"eva_config": null,
|
| 8 |
+
"exclude_modules": null,
|
| 9 |
+
"fan_in_fan_out": false,
|
| 10 |
+
"inference_mode": true,
|
| 11 |
+
"init_lora_weights": true,
|
| 12 |
+
"layer_replication": null,
|
| 13 |
+
"layers_pattern": null,
|
| 14 |
+
"layers_to_transform": null,
|
| 15 |
+
"loftq_config": {},
|
| 16 |
+
"lora_alpha": 32,
|
| 17 |
+
"lora_bias": false,
|
| 18 |
+
"lora_dropout": 0.05,
|
| 19 |
+
"megatron_config": null,
|
| 20 |
+
"megatron_core": "megatron.core",
|
| 21 |
+
"modules_to_save": [],
|
| 22 |
+
"peft_type": "LORA",
|
| 23 |
+
"r": 8,
|
| 24 |
+
"rank_pattern": {},
|
| 25 |
+
"revision": null,
|
| 26 |
+
"target_modules": [
|
| 27 |
+
"v_proj",
|
| 28 |
+
"down_proj",
|
| 29 |
+
"k_proj",
|
| 30 |
+
"up_proj",
|
| 31 |
+
"gate_proj",
|
| 32 |
+
"q_proj",
|
| 33 |
+
"o_proj"
|
| 34 |
+
],
|
| 35 |
+
"task_type": "CAUSAL_LM",
|
| 36 |
+
"trainable_token_indices": null,
|
| 37 |
+
"use_dora": false,
|
| 38 |
+
"use_rslora": false
|
| 39 |
+
}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1020/additional_config.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"lora_dtype": null, "lorap_lr_ratio": null, "lorap_emb_lr": 1e-06}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1020/args.json
ADDED
|
@@ -0,0 +1,364 @@
|
|
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|
|
|
| 1 |
+
{
|
| 2 |
+
"model": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 3 |
+
"model_type": "qwen2_5",
|
| 4 |
+
"model_revision": null,
|
| 5 |
+
"task_type": "causal_lm",
|
| 6 |
+
"torch_dtype": "bfloat16",
|
| 7 |
+
"attn_impl": null,
|
| 8 |
+
"num_labels": null,
|
| 9 |
+
"problem_type": null,
|
| 10 |
+
"rope_scaling": null,
|
| 11 |
+
"device_map": null,
|
| 12 |
+
"max_memory": {},
|
| 13 |
+
"local_repo_path": null,
|
| 14 |
+
"template": "qwen2_5",
|
| 15 |
+
"system": null,
|
| 16 |
+
"max_length": 8192,
|
| 17 |
+
"truncation_strategy": "delete",
|
| 18 |
+
"max_pixels": null,
|
| 19 |
+
"tools_prompt": "react_en",
|
| 20 |
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hf_model_id='Qwen/Qwen2.5-Coder-14B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B', hf_model_id='Qwen/Qwen2.5-Coder-32B', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-0.5B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-1.5B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-AWQ', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-AWQ', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-AWQ', model_path=None, 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hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-3B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-7B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-14B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None)], ignore_patterns=None, requires=None, tags=['coding'])], template='qwen2_5', get_function=<function get_model_tokenizer_with_flash_attn at 0x7f22ea5f5e10>, model_arch='llama', architectures=['Qwen2ForCausalLM'], additional_saved_files=[], torch_dtype=None, is_multimodal=False, is_reward=False, task_type=None, ignore_patterns=[], requires=['transformers>=4.37'], tags=[])",
|
| 360 |
+
"model_dir": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 361 |
+
"hub": "<class 'swift.hub.hub.MSHub'>",
|
| 362 |
+
"evaluation_strategy": "steps",
|
| 363 |
+
"training_args": "Seq2SeqTrainingArguments(output_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250', overwrite_output_dir=False, do_train=False, do_eval=True, do_predict=False, eval_strategy=<IntervalStrategy.STEPS: 'steps'>, prediction_loss_only=False, per_device_train_batch_size=2, per_device_eval_batch_size=2, per_gpu_train_batch_size=None, per_gpu_eval_batch_size=None, gradient_accumulation_steps=4, eval_accumulation_steps=None, eval_delay=0, torch_empty_cache_steps=None, learning_rate=1e-05, weight_decay=0.1, adam_beta1=0.9, adam_beta2=0.95, adam_epsilon=1e-08, max_grad_norm=1.0, num_train_epochs=3.0, max_steps=-1, lr_scheduler_type=<SchedulerType.COSINE: 'cosine'>, lr_scheduler_kwargs=None, warmup_ratio=0.05, warmup_steps=0, log_level='passive', log_level_replica='warning', log_on_each_node=True, logging_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250/runs', logging_strategy=<IntervalStrategy.STEPS: 'steps'>, logging_first_step=True, logging_steps=1, logging_nan_inf_filter=True, save_strategy=<SaveStrategy.STEPS: 'steps'>, save_steps=5, save_total_limit=5, save_safetensors=True, save_on_each_node=False, save_only_model=True, restore_callback_states_from_checkpoint=False, no_cuda=False, use_cpu=False, use_mps_device=False, seed=42, data_seed=42, jit_mode_eval=False, use_ipex=False, bf16=True, fp16=False, fp16_opt_level='O1', half_precision_backend='auto', bf16_full_eval=False, fp16_full_eval=False, tf32=None, local_rank=0, ddp_backend=None, tpu_num_cores=None, tpu_metrics_debug=False, debug=[], dataloader_drop_last=False, eval_steps=5, dataloader_num_workers=1, dataloader_prefetch_factor=10, past_index=-1, run_name='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250', disable_tqdm=False, remove_unused_columns=False, label_names=None, load_best_model_at_end=False, metric_for_best_model='loss', greater_is_better=False, ignore_data_skip=False, fsdp=[], fsdp_min_num_params=0, fsdp_config={'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, tp_size=0, fsdp_transformer_layer_cls_to_wrap=None, accelerator_config=AcceleratorConfig(split_batches=False, dispatch_batches=False, even_batches=True, use_seedable_sampler=True, non_blocking=False, gradient_accumulation_kwargs=None, use_configured_state=False), deepspeed={'fp16': {'enabled': 'auto', 'loss_scale': 0, 'loss_scale_window': 1000, 'initial_scale_power': 16, 'hysteresis': 2, 'min_loss_scale': 1}, 'bf16': {'enabled': 'auto'}, 'zero_optimization': {'stage': 3, 'offload_optimizer': {'device': 'none', 'pin_memory': True}, 'offload_param': {'device': 'none', 'pin_memory': True}, 'overlap_comm': False, 'contiguous_gradients': True, 'sub_group_size': 1000000000.0, 'reduce_bucket_size': 'auto', 'zero_quantized_weights': False, 'zero_quantized_gradients': False, 'stage3_prefetch_bucket_size': 'auto', 'stage3_param_persistence_threshold': 'auto', 'stage3_max_live_parameters': 1000000000.0, 'stage3_max_reuse_distance': 1000000000.0, 'stage3_gather_16bit_weights_on_model_save': True}, 'gradient_accumulation_steps': 'auto', 'gradient_clipping': 'auto', 'steps_per_print': 2000, 'train_batch_size': 'auto', 'train_micro_batch_size_per_gpu': 'auto', 'wall_clock_breakdown': False}, label_smoothing_factor=0.0, optim=<OptimizerNames.ADAMW_TORCH: 'adamw_torch'>, optim_args=None, adafactor=False, group_by_length=False, length_column_name='length', report_to=['tensorboard'], ddp_find_unused_parameters=None, ddp_bucket_cap_mb=None, ddp_broadcast_buffers=None, dataloader_pin_memory=True, dataloader_persistent_workers=False, skip_memory_metrics=True, use_legacy_prediction_loop=False, push_to_hub=False, resume_from_checkpoint=None, hub_model_id=None, hub_strategy=<HubStrategy.EVERY_SAVE: 'every_save'>, hub_token=None, hub_private_repo=None, hub_always_push=False, gradient_checkpointing=True, gradient_checkpointing_kwargs=None, include_inputs_for_metrics=False, include_for_metrics=[], eval_do_concat_batches=True, fp16_backend='auto', push_to_hub_model_id=None, push_to_hub_organization=None, push_to_hub_token=None, mp_parameters='', auto_find_batch_size=False, full_determinism=False, torchdynamo=None, ray_scope='last', ddp_timeout=1800, torch_compile=False, torch_compile_backend=None, torch_compile_mode=None, include_tokens_per_second=None, include_num_input_tokens_seen=None, neftune_noise_alpha=None, optim_target_modules=None, batch_eval_metrics=False, eval_on_start=False, use_liger_kernel=False, eval_use_gather_object=False, average_tokens_across_devices=None, sortish_sampler=False, predict_with_generate=False, generation_max_length=None, generation_num_beams=None, generation_config=None, check_model=True, acc_strategy='token', train_dataloader_shuffle=True, metric_warmup_step=0, fsdp_num=1, acc_steps=1, eval_use_evalscope=False, eval_datasets=[], eval_limit=None, eval_datasets_args=None, eval_generation_config=None, train_type='lora', optimizer=None, local_repo_path=None, galore_config=None)"
|
| 364 |
+
}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1020/trainer_state.json
ADDED
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BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1025/README.md
ADDED
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
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|
|
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|
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|
|
| 1 |
+
---
|
| 2 |
+
base_model: /oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged
|
| 3 |
+
library_name: peft
|
| 4 |
+
---
|
| 5 |
+
|
| 6 |
+
# Model Card for Model ID
|
| 7 |
+
|
| 8 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 9 |
+
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
## Model Details
|
| 13 |
+
|
| 14 |
+
### Model Description
|
| 15 |
+
|
| 16 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 17 |
+
|
| 18 |
+
|
| 19 |
+
|
| 20 |
+
- **Developed by:** [More Information Needed]
|
| 21 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 22 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 23 |
+
- **Model type:** [More Information Needed]
|
| 24 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 25 |
+
- **License:** [More Information Needed]
|
| 26 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 27 |
+
|
| 28 |
+
### Model Sources [optional]
|
| 29 |
+
|
| 30 |
+
<!-- Provide the basic links for the model. -->
|
| 31 |
+
|
| 32 |
+
- **Repository:** [More Information Needed]
|
| 33 |
+
- **Paper [optional]:** [More Information Needed]
|
| 34 |
+
- **Demo [optional]:** [More Information Needed]
|
| 35 |
+
|
| 36 |
+
## Uses
|
| 37 |
+
|
| 38 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 39 |
+
|
| 40 |
+
### Direct Use
|
| 41 |
+
|
| 42 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 43 |
+
|
| 44 |
+
[More Information Needed]
|
| 45 |
+
|
| 46 |
+
### Downstream Use [optional]
|
| 47 |
+
|
| 48 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 49 |
+
|
| 50 |
+
[More Information Needed]
|
| 51 |
+
|
| 52 |
+
### Out-of-Scope Use
|
| 53 |
+
|
| 54 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 55 |
+
|
| 56 |
+
[More Information Needed]
|
| 57 |
+
|
| 58 |
+
## Bias, Risks, and Limitations
|
| 59 |
+
|
| 60 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 61 |
+
|
| 62 |
+
[More Information Needed]
|
| 63 |
+
|
| 64 |
+
### Recommendations
|
| 65 |
+
|
| 66 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 67 |
+
|
| 68 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 69 |
+
|
| 70 |
+
## How to Get Started with the Model
|
| 71 |
+
|
| 72 |
+
Use the code below to get started with the model.
|
| 73 |
+
|
| 74 |
+
[More Information Needed]
|
| 75 |
+
|
| 76 |
+
## Training Details
|
| 77 |
+
|
| 78 |
+
### Training Data
|
| 79 |
+
|
| 80 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 81 |
+
|
| 82 |
+
[More Information Needed]
|
| 83 |
+
|
| 84 |
+
### Training Procedure
|
| 85 |
+
|
| 86 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 87 |
+
|
| 88 |
+
#### Preprocessing [optional]
|
| 89 |
+
|
| 90 |
+
[More Information Needed]
|
| 91 |
+
|
| 92 |
+
|
| 93 |
+
#### Training Hyperparameters
|
| 94 |
+
|
| 95 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 96 |
+
|
| 97 |
+
#### Speeds, Sizes, Times [optional]
|
| 98 |
+
|
| 99 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 100 |
+
|
| 101 |
+
[More Information Needed]
|
| 102 |
+
|
| 103 |
+
## Evaluation
|
| 104 |
+
|
| 105 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 106 |
+
|
| 107 |
+
### Testing Data, Factors & Metrics
|
| 108 |
+
|
| 109 |
+
#### Testing Data
|
| 110 |
+
|
| 111 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 112 |
+
|
| 113 |
+
[More Information Needed]
|
| 114 |
+
|
| 115 |
+
#### Factors
|
| 116 |
+
|
| 117 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 118 |
+
|
| 119 |
+
[More Information Needed]
|
| 120 |
+
|
| 121 |
+
#### Metrics
|
| 122 |
+
|
| 123 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 124 |
+
|
| 125 |
+
[More Information Needed]
|
| 126 |
+
|
| 127 |
+
### Results
|
| 128 |
+
|
| 129 |
+
[More Information Needed]
|
| 130 |
+
|
| 131 |
+
#### Summary
|
| 132 |
+
|
| 133 |
+
|
| 134 |
+
|
| 135 |
+
## Model Examination [optional]
|
| 136 |
+
|
| 137 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 138 |
+
|
| 139 |
+
[More Information Needed]
|
| 140 |
+
|
| 141 |
+
## Environmental Impact
|
| 142 |
+
|
| 143 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 144 |
+
|
| 145 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 146 |
+
|
| 147 |
+
- **Hardware Type:** [More Information Needed]
|
| 148 |
+
- **Hours used:** [More Information Needed]
|
| 149 |
+
- **Cloud Provider:** [More Information Needed]
|
| 150 |
+
- **Compute Region:** [More Information Needed]
|
| 151 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 152 |
+
|
| 153 |
+
## Technical Specifications [optional]
|
| 154 |
+
|
| 155 |
+
### Model Architecture and Objective
|
| 156 |
+
|
| 157 |
+
[More Information Needed]
|
| 158 |
+
|
| 159 |
+
### Compute Infrastructure
|
| 160 |
+
|
| 161 |
+
[More Information Needed]
|
| 162 |
+
|
| 163 |
+
#### Hardware
|
| 164 |
+
|
| 165 |
+
[More Information Needed]
|
| 166 |
+
|
| 167 |
+
#### Software
|
| 168 |
+
|
| 169 |
+
[More Information Needed]
|
| 170 |
+
|
| 171 |
+
## Citation [optional]
|
| 172 |
+
|
| 173 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 174 |
+
|
| 175 |
+
**BibTeX:**
|
| 176 |
+
|
| 177 |
+
[More Information Needed]
|
| 178 |
+
|
| 179 |
+
**APA:**
|
| 180 |
+
|
| 181 |
+
[More Information Needed]
|
| 182 |
+
|
| 183 |
+
## Glossary [optional]
|
| 184 |
+
|
| 185 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 186 |
+
|
| 187 |
+
[More Information Needed]
|
| 188 |
+
|
| 189 |
+
## More Information [optional]
|
| 190 |
+
|
| 191 |
+
[More Information Needed]
|
| 192 |
+
|
| 193 |
+
## Model Card Authors [optional]
|
| 194 |
+
|
| 195 |
+
[More Information Needed]
|
| 196 |
+
|
| 197 |
+
## Model Card Contact
|
| 198 |
+
|
| 199 |
+
[More Information Needed]
|
| 200 |
+
### Framework versions
|
| 201 |
+
|
| 202 |
+
- PEFT 0.15.2
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1025/adapter_config.json
ADDED
|
@@ -0,0 +1,39 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"alpha_pattern": {},
|
| 3 |
+
"auto_mapping": null,
|
| 4 |
+
"base_model_name_or_path": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 5 |
+
"bias": "none",
|
| 6 |
+
"corda_config": null,
|
| 7 |
+
"eva_config": null,
|
| 8 |
+
"exclude_modules": null,
|
| 9 |
+
"fan_in_fan_out": false,
|
| 10 |
+
"inference_mode": true,
|
| 11 |
+
"init_lora_weights": true,
|
| 12 |
+
"layer_replication": null,
|
| 13 |
+
"layers_pattern": null,
|
| 14 |
+
"layers_to_transform": null,
|
| 15 |
+
"loftq_config": {},
|
| 16 |
+
"lora_alpha": 32,
|
| 17 |
+
"lora_bias": false,
|
| 18 |
+
"lora_dropout": 0.05,
|
| 19 |
+
"megatron_config": null,
|
| 20 |
+
"megatron_core": "megatron.core",
|
| 21 |
+
"modules_to_save": [],
|
| 22 |
+
"peft_type": "LORA",
|
| 23 |
+
"r": 8,
|
| 24 |
+
"rank_pattern": {},
|
| 25 |
+
"revision": null,
|
| 26 |
+
"target_modules": [
|
| 27 |
+
"v_proj",
|
| 28 |
+
"down_proj",
|
| 29 |
+
"k_proj",
|
| 30 |
+
"up_proj",
|
| 31 |
+
"gate_proj",
|
| 32 |
+
"q_proj",
|
| 33 |
+
"o_proj"
|
| 34 |
+
],
|
| 35 |
+
"task_type": "CAUSAL_LM",
|
| 36 |
+
"trainable_token_indices": null,
|
| 37 |
+
"use_dora": false,
|
| 38 |
+
"use_rslora": false
|
| 39 |
+
}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1025/additional_config.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"lora_dtype": null, "lorap_lr_ratio": null, "lorap_emb_lr": 1e-06}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1025/args.json
ADDED
|
@@ -0,0 +1,364 @@
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
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|
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|
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|
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|
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Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int4', model_path=None, ms_revision=None, hf_revision=None), Model(ms_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', hf_model_id='Qwen/Qwen2.5-Coder-32B-Instruct-GPTQ-Int8', model_path=None, ms_revision=None, hf_revision=None)], ignore_patterns=None, requires=None, tags=['coding'])], template='qwen2_5', get_function=<function get_model_tokenizer_with_flash_attn at 0x7f22ea5f5e10>, model_arch='llama', architectures=['Qwen2ForCausalLM'], additional_saved_files=[], torch_dtype=None, is_multimodal=False, is_reward=False, task_type=None, ignore_patterns=[], requires=['transformers>=4.37'], tags=[])",
|
| 360 |
+
"model_dir": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 361 |
+
"hub": "<class 'swift.hub.hub.MSHub'>",
|
| 362 |
+
"evaluation_strategy": "steps",
|
| 363 |
+
"training_args": "Seq2SeqTrainingArguments(output_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250', overwrite_output_dir=False, do_train=False, do_eval=True, do_predict=False, eval_strategy=<IntervalStrategy.STEPS: 'steps'>, prediction_loss_only=False, per_device_train_batch_size=2, per_device_eval_batch_size=2, per_gpu_train_batch_size=None, per_gpu_eval_batch_size=None, gradient_accumulation_steps=4, eval_accumulation_steps=None, eval_delay=0, torch_empty_cache_steps=None, learning_rate=1e-05, weight_decay=0.1, adam_beta1=0.9, adam_beta2=0.95, adam_epsilon=1e-08, max_grad_norm=1.0, num_train_epochs=3.0, max_steps=-1, lr_scheduler_type=<SchedulerType.COSINE: 'cosine'>, lr_scheduler_kwargs=None, warmup_ratio=0.05, warmup_steps=0, log_level='passive', log_level_replica='warning', log_on_each_node=True, logging_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250/runs', logging_strategy=<IntervalStrategy.STEPS: 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fsdp_min_num_params=0, fsdp_config={'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, tp_size=0, fsdp_transformer_layer_cls_to_wrap=None, accelerator_config=AcceleratorConfig(split_batches=False, dispatch_batches=False, even_batches=True, use_seedable_sampler=True, non_blocking=False, gradient_accumulation_kwargs=None, use_configured_state=False), deepspeed={'fp16': {'enabled': 'auto', 'loss_scale': 0, 'loss_scale_window': 1000, 'initial_scale_power': 16, 'hysteresis': 2, 'min_loss_scale': 1}, 'bf16': {'enabled': 'auto'}, 'zero_optimization': {'stage': 3, 'offload_optimizer': {'device': 'none', 'pin_memory': True}, 'offload_param': {'device': 'none', 'pin_memory': True}, 'overlap_comm': False, 'contiguous_gradients': True, 'sub_group_size': 1000000000.0, 'reduce_bucket_size': 'auto', 'zero_quantized_weights': False, 'zero_quantized_gradients': False, 'stage3_prefetch_bucket_size': 'auto', 'stage3_param_persistence_threshold': 'auto', 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include_inputs_for_metrics=False, include_for_metrics=[], eval_do_concat_batches=True, fp16_backend='auto', push_to_hub_model_id=None, push_to_hub_organization=None, push_to_hub_token=None, mp_parameters='', auto_find_batch_size=False, full_determinism=False, torchdynamo=None, ray_scope='last', ddp_timeout=1800, torch_compile=False, torch_compile_backend=None, torch_compile_mode=None, include_tokens_per_second=None, include_num_input_tokens_seen=None, neftune_noise_alpha=None, optim_target_modules=None, batch_eval_metrics=False, eval_on_start=False, use_liger_kernel=False, eval_use_gather_object=False, average_tokens_across_devices=None, sortish_sampler=False, predict_with_generate=False, generation_max_length=None, generation_num_beams=None, generation_config=None, check_model=True, acc_strategy='token', train_dataloader_shuffle=True, metric_warmup_step=0, fsdp_num=1, acc_steps=1, eval_use_evalscope=False, eval_datasets=[], eval_limit=None, eval_datasets_args=None, eval_generation_config=None, train_type='lora', optimizer=None, local_repo_path=None, galore_config=None)"
|
| 364 |
+
}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1025/trainer_state.json
ADDED
|
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|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1029/README.md
ADDED
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@@ -0,0 +1,202 @@
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| 1 |
+
---
|
| 2 |
+
base_model: /oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged
|
| 3 |
+
library_name: peft
|
| 4 |
+
---
|
| 5 |
+
|
| 6 |
+
# Model Card for Model ID
|
| 7 |
+
|
| 8 |
+
<!-- Provide a quick summary of what the model is/does. -->
|
| 9 |
+
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
## Model Details
|
| 13 |
+
|
| 14 |
+
### Model Description
|
| 15 |
+
|
| 16 |
+
<!-- Provide a longer summary of what this model is. -->
|
| 17 |
+
|
| 18 |
+
|
| 19 |
+
|
| 20 |
+
- **Developed by:** [More Information Needed]
|
| 21 |
+
- **Funded by [optional]:** [More Information Needed]
|
| 22 |
+
- **Shared by [optional]:** [More Information Needed]
|
| 23 |
+
- **Model type:** [More Information Needed]
|
| 24 |
+
- **Language(s) (NLP):** [More Information Needed]
|
| 25 |
+
- **License:** [More Information Needed]
|
| 26 |
+
- **Finetuned from model [optional]:** [More Information Needed]
|
| 27 |
+
|
| 28 |
+
### Model Sources [optional]
|
| 29 |
+
|
| 30 |
+
<!-- Provide the basic links for the model. -->
|
| 31 |
+
|
| 32 |
+
- **Repository:** [More Information Needed]
|
| 33 |
+
- **Paper [optional]:** [More Information Needed]
|
| 34 |
+
- **Demo [optional]:** [More Information Needed]
|
| 35 |
+
|
| 36 |
+
## Uses
|
| 37 |
+
|
| 38 |
+
<!-- Address questions around how the model is intended to be used, including the foreseeable users of the model and those affected by the model. -->
|
| 39 |
+
|
| 40 |
+
### Direct Use
|
| 41 |
+
|
| 42 |
+
<!-- This section is for the model use without fine-tuning or plugging into a larger ecosystem/app. -->
|
| 43 |
+
|
| 44 |
+
[More Information Needed]
|
| 45 |
+
|
| 46 |
+
### Downstream Use [optional]
|
| 47 |
+
|
| 48 |
+
<!-- This section is for the model use when fine-tuned for a task, or when plugged into a larger ecosystem/app -->
|
| 49 |
+
|
| 50 |
+
[More Information Needed]
|
| 51 |
+
|
| 52 |
+
### Out-of-Scope Use
|
| 53 |
+
|
| 54 |
+
<!-- This section addresses misuse, malicious use, and uses that the model will not work well for. -->
|
| 55 |
+
|
| 56 |
+
[More Information Needed]
|
| 57 |
+
|
| 58 |
+
## Bias, Risks, and Limitations
|
| 59 |
+
|
| 60 |
+
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
|
| 61 |
+
|
| 62 |
+
[More Information Needed]
|
| 63 |
+
|
| 64 |
+
### Recommendations
|
| 65 |
+
|
| 66 |
+
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
|
| 67 |
+
|
| 68 |
+
Users (both direct and downstream) should be made aware of the risks, biases and limitations of the model. More information needed for further recommendations.
|
| 69 |
+
|
| 70 |
+
## How to Get Started with the Model
|
| 71 |
+
|
| 72 |
+
Use the code below to get started with the model.
|
| 73 |
+
|
| 74 |
+
[More Information Needed]
|
| 75 |
+
|
| 76 |
+
## Training Details
|
| 77 |
+
|
| 78 |
+
### Training Data
|
| 79 |
+
|
| 80 |
+
<!-- This should link to a Dataset Card, perhaps with a short stub of information on what the training data is all about as well as documentation related to data pre-processing or additional filtering. -->
|
| 81 |
+
|
| 82 |
+
[More Information Needed]
|
| 83 |
+
|
| 84 |
+
### Training Procedure
|
| 85 |
+
|
| 86 |
+
<!-- This relates heavily to the Technical Specifications. Content here should link to that section when it is relevant to the training procedure. -->
|
| 87 |
+
|
| 88 |
+
#### Preprocessing [optional]
|
| 89 |
+
|
| 90 |
+
[More Information Needed]
|
| 91 |
+
|
| 92 |
+
|
| 93 |
+
#### Training Hyperparameters
|
| 94 |
+
|
| 95 |
+
- **Training regime:** [More Information Needed] <!--fp32, fp16 mixed precision, bf16 mixed precision, bf16 non-mixed precision, fp16 non-mixed precision, fp8 mixed precision -->
|
| 96 |
+
|
| 97 |
+
#### Speeds, Sizes, Times [optional]
|
| 98 |
+
|
| 99 |
+
<!-- This section provides information about throughput, start/end time, checkpoint size if relevant, etc. -->
|
| 100 |
+
|
| 101 |
+
[More Information Needed]
|
| 102 |
+
|
| 103 |
+
## Evaluation
|
| 104 |
+
|
| 105 |
+
<!-- This section describes the evaluation protocols and provides the results. -->
|
| 106 |
+
|
| 107 |
+
### Testing Data, Factors & Metrics
|
| 108 |
+
|
| 109 |
+
#### Testing Data
|
| 110 |
+
|
| 111 |
+
<!-- This should link to a Dataset Card if possible. -->
|
| 112 |
+
|
| 113 |
+
[More Information Needed]
|
| 114 |
+
|
| 115 |
+
#### Factors
|
| 116 |
+
|
| 117 |
+
<!-- These are the things the evaluation is disaggregating by, e.g., subpopulations or domains. -->
|
| 118 |
+
|
| 119 |
+
[More Information Needed]
|
| 120 |
+
|
| 121 |
+
#### Metrics
|
| 122 |
+
|
| 123 |
+
<!-- These are the evaluation metrics being used, ideally with a description of why. -->
|
| 124 |
+
|
| 125 |
+
[More Information Needed]
|
| 126 |
+
|
| 127 |
+
### Results
|
| 128 |
+
|
| 129 |
+
[More Information Needed]
|
| 130 |
+
|
| 131 |
+
#### Summary
|
| 132 |
+
|
| 133 |
+
|
| 134 |
+
|
| 135 |
+
## Model Examination [optional]
|
| 136 |
+
|
| 137 |
+
<!-- Relevant interpretability work for the model goes here -->
|
| 138 |
+
|
| 139 |
+
[More Information Needed]
|
| 140 |
+
|
| 141 |
+
## Environmental Impact
|
| 142 |
+
|
| 143 |
+
<!-- Total emissions (in grams of CO2eq) and additional considerations, such as electricity usage, go here. Edit the suggested text below accordingly -->
|
| 144 |
+
|
| 145 |
+
Carbon emissions can be estimated using the [Machine Learning Impact calculator](https://mlco2.github.io/impact#compute) presented in [Lacoste et al. (2019)](https://arxiv.org/abs/1910.09700).
|
| 146 |
+
|
| 147 |
+
- **Hardware Type:** [More Information Needed]
|
| 148 |
+
- **Hours used:** [More Information Needed]
|
| 149 |
+
- **Cloud Provider:** [More Information Needed]
|
| 150 |
+
- **Compute Region:** [More Information Needed]
|
| 151 |
+
- **Carbon Emitted:** [More Information Needed]
|
| 152 |
+
|
| 153 |
+
## Technical Specifications [optional]
|
| 154 |
+
|
| 155 |
+
### Model Architecture and Objective
|
| 156 |
+
|
| 157 |
+
[More Information Needed]
|
| 158 |
+
|
| 159 |
+
### Compute Infrastructure
|
| 160 |
+
|
| 161 |
+
[More Information Needed]
|
| 162 |
+
|
| 163 |
+
#### Hardware
|
| 164 |
+
|
| 165 |
+
[More Information Needed]
|
| 166 |
+
|
| 167 |
+
#### Software
|
| 168 |
+
|
| 169 |
+
[More Information Needed]
|
| 170 |
+
|
| 171 |
+
## Citation [optional]
|
| 172 |
+
|
| 173 |
+
<!-- If there is a paper or blog post introducing the model, the APA and Bibtex information for that should go in this section. -->
|
| 174 |
+
|
| 175 |
+
**BibTeX:**
|
| 176 |
+
|
| 177 |
+
[More Information Needed]
|
| 178 |
+
|
| 179 |
+
**APA:**
|
| 180 |
+
|
| 181 |
+
[More Information Needed]
|
| 182 |
+
|
| 183 |
+
## Glossary [optional]
|
| 184 |
+
|
| 185 |
+
<!-- If relevant, include terms and calculations in this section that can help readers understand the model or model card. -->
|
| 186 |
+
|
| 187 |
+
[More Information Needed]
|
| 188 |
+
|
| 189 |
+
## More Information [optional]
|
| 190 |
+
|
| 191 |
+
[More Information Needed]
|
| 192 |
+
|
| 193 |
+
## Model Card Authors [optional]
|
| 194 |
+
|
| 195 |
+
[More Information Needed]
|
| 196 |
+
|
| 197 |
+
## Model Card Contact
|
| 198 |
+
|
| 199 |
+
[More Information Needed]
|
| 200 |
+
### Framework versions
|
| 201 |
+
|
| 202 |
+
- PEFT 0.15.2
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1029/adapter_config.json
ADDED
|
@@ -0,0 +1,39 @@
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| 1 |
+
{
|
| 2 |
+
"alpha_pattern": {},
|
| 3 |
+
"auto_mapping": null,
|
| 4 |
+
"base_model_name_or_path": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
|
| 5 |
+
"bias": "none",
|
| 6 |
+
"corda_config": null,
|
| 7 |
+
"eva_config": null,
|
| 8 |
+
"exclude_modules": null,
|
| 9 |
+
"fan_in_fan_out": false,
|
| 10 |
+
"inference_mode": true,
|
| 11 |
+
"init_lora_weights": true,
|
| 12 |
+
"layer_replication": null,
|
| 13 |
+
"layers_pattern": null,
|
| 14 |
+
"layers_to_transform": null,
|
| 15 |
+
"loftq_config": {},
|
| 16 |
+
"lora_alpha": 32,
|
| 17 |
+
"lora_bias": false,
|
| 18 |
+
"lora_dropout": 0.05,
|
| 19 |
+
"megatron_config": null,
|
| 20 |
+
"megatron_core": "megatron.core",
|
| 21 |
+
"modules_to_save": [],
|
| 22 |
+
"peft_type": "LORA",
|
| 23 |
+
"r": 8,
|
| 24 |
+
"rank_pattern": {},
|
| 25 |
+
"revision": null,
|
| 26 |
+
"target_modules": [
|
| 27 |
+
"v_proj",
|
| 28 |
+
"down_proj",
|
| 29 |
+
"k_proj",
|
| 30 |
+
"up_proj",
|
| 31 |
+
"gate_proj",
|
| 32 |
+
"q_proj",
|
| 33 |
+
"o_proj"
|
| 34 |
+
],
|
| 35 |
+
"task_type": "CAUSAL_LM",
|
| 36 |
+
"trainable_token_indices": null,
|
| 37 |
+
"use_dora": false,
|
| 38 |
+
"use_rslora": false
|
| 39 |
+
}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1029/additional_config.json
ADDED
|
@@ -0,0 +1 @@
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| 1 |
+
{"lora_dtype": null, "lorap_lr_ratio": null, "lorap_emb_lr": 1e-06}
|
BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1029/args.json
ADDED
|
@@ -0,0 +1,364 @@
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| 1 |
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| 2 |
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"model_dir": "/oss/wangyujia/BIO/construction_finetuning/alpaca/v1-20250609-141541/checkpoint-50-merged",
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"training_args": "Seq2SeqTrainingArguments(output_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250', overwrite_output_dir=False, do_train=False, do_eval=True, do_predict=False, eval_strategy=<IntervalStrategy.STEPS: 'steps'>, prediction_loss_only=False, per_device_train_batch_size=2, per_device_eval_batch_size=2, per_gpu_train_batch_size=None, per_gpu_eval_batch_size=None, gradient_accumulation_steps=4, eval_accumulation_steps=None, eval_delay=0, torch_empty_cache_steps=None, learning_rate=1e-05, weight_decay=0.1, adam_beta1=0.9, adam_beta2=0.95, adam_epsilon=1e-08, max_grad_norm=1.0, num_train_epochs=3.0, max_steps=-1, lr_scheduler_type=<SchedulerType.COSINE: 'cosine'>, lr_scheduler_kwargs=None, warmup_ratio=0.05, warmup_steps=0, log_level='passive', log_level_replica='warning', log_on_each_node=True, logging_dir='/nas/shared/kilab/wangyujia/BIO/sft/qwen-production-08022302/v0-20250802-230250/runs', logging_strategy=<IntervalStrategy.STEPS: 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fsdp_min_num_params=0, fsdp_config={'min_num_params': 0, 'xla': False, 'xla_fsdp_v2': False, 'xla_fsdp_grad_ckpt': False}, tp_size=0, fsdp_transformer_layer_cls_to_wrap=None, accelerator_config=AcceleratorConfig(split_batches=False, dispatch_batches=False, even_batches=True, use_seedable_sampler=True, non_blocking=False, gradient_accumulation_kwargs=None, use_configured_state=False), deepspeed={'fp16': {'enabled': 'auto', 'loss_scale': 0, 'loss_scale_window': 1000, 'initial_scale_power': 16, 'hysteresis': 2, 'min_loss_scale': 1}, 'bf16': {'enabled': 'auto'}, 'zero_optimization': {'stage': 3, 'offload_optimizer': {'device': 'none', 'pin_memory': True}, 'offload_param': {'device': 'none', 'pin_memory': True}, 'overlap_comm': False, 'contiguous_gradients': True, 'sub_group_size': 1000000000.0, 'reduce_bucket_size': 'auto', 'zero_quantized_weights': False, 'zero_quantized_gradients': False, 'stage3_prefetch_bucket_size': 'auto', 'stage3_param_persistence_threshold': 'auto', 'stage3_max_live_parameters': 1000000000.0, 'stage3_max_reuse_distance': 1000000000.0, 'stage3_gather_16bit_weights_on_model_save': True}, 'gradient_accumulation_steps': 'auto', 'gradient_clipping': 'auto', 'steps_per_print': 2000, 'train_batch_size': 'auto', 'train_micro_batch_size_per_gpu': 'auto', 'wall_clock_breakdown': False}, label_smoothing_factor=0.0, optim=<OptimizerNames.ADAMW_TORCH: 'adamw_torch'>, optim_args=None, adafactor=False, group_by_length=False, length_column_name='length', report_to=['tensorboard'], ddp_find_unused_parameters=None, ddp_bucket_cap_mb=None, ddp_broadcast_buffers=None, dataloader_pin_memory=True, dataloader_persistent_workers=False, skip_memory_metrics=True, use_legacy_prediction_loop=False, push_to_hub=False, resume_from_checkpoint=None, hub_model_id=None, hub_strategy=<HubStrategy.EVERY_SAVE: 'every_save'>, hub_token=None, hub_private_repo=None, hub_always_push=False, gradient_checkpointing=True, gradient_checkpointing_kwargs=None, include_inputs_for_metrics=False, include_for_metrics=[], eval_do_concat_batches=True, fp16_backend='auto', push_to_hub_model_id=None, push_to_hub_organization=None, push_to_hub_token=None, mp_parameters='', auto_find_batch_size=False, full_determinism=False, torchdynamo=None, ray_scope='last', ddp_timeout=1800, torch_compile=False, torch_compile_backend=None, torch_compile_mode=None, include_tokens_per_second=None, include_num_input_tokens_seen=None, neftune_noise_alpha=None, optim_target_modules=None, batch_eval_metrics=False, eval_on_start=False, use_liger_kernel=False, eval_use_gather_object=False, average_tokens_across_devices=None, sortish_sampler=False, predict_with_generate=False, generation_max_length=None, generation_num_beams=None, generation_config=None, check_model=True, acc_strategy='token', train_dataloader_shuffle=True, metric_warmup_step=0, fsdp_num=1, acc_steps=1, eval_use_evalscope=False, eval_datasets=[], eval_limit=None, eval_datasets_args=None, eval_generation_config=None, train_type='lora', optimizer=None, local_repo_path=None, galore_config=None)"
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BIO/sft/qwen-production-08022302/v0-20250802-230250/checkpoint-1029/trainer_state.json
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BIO/sft/qwen-production-08022302/v0-20250802-230250/logging.jsonl
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BIO/sft/qwen-production-08022302/v0-20250802-230250/val_dataset.jsonl
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