{
  "cfg": {
    "jsonl_path": "/kaggle/input/main-data02/gnn_dataset_fixed.json",
    "node_emb_npz": "/kaggle/input/node-embeddings01/node_embeds_ada002.npz",
    "q_encoder_name": "distilbert-base-uncased",
    "max_q_len": 128,
    "freeze_q_encoder": true,
    "hidden_dim": 256,
    "instr_k": 3,
    "gnn_layers": 3,
    "revise_T": 2,
    "max_hop": 4,
    "batch_size": 8,
    "lr": 0.0002,
    "weight_decay": 0.0001,
    "epochs": 8,
    "grad_clip": 1.0,
    "use_focal": false,
    "focal_gamma": 2.0,
    "pos_weight": 4.147643384440658,
    "out_dir": "/kaggle/working/rearev_nodeclf",
    "save_name": "model.pt"
  },
  "rel_list": [
    "Compound-binds-Gene",
    "Compound-downregulates-Gene",
    "Compound-resembles-Compound",
    "Compound-upregulates-Gene",
    "Gene-covaries-Gene",
    "Gene-interacts-Gene",
    "Gene-participates-Biological Process",
    "Gene-participates-Molecular Function",
    "Gene-participates-Pathway",
    "Gene-regulates-Gene"
  ]
}